RNA–Protein interactions for RNA: ENST00000325805.12

BBX-201, Transcript of BBX, HMG-box containing, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BBX, Length 3,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-201ENST00000325805 NISCHQ9Y2I1 1504 aa10.68□□□□□ -0.7
BBX-201ENST00000325805 PELP1Q8IZL8 1130 aaKnown RBP10.11□□□□□ -0.79
BBX-201ENST00000325805 MYT1Q01538 1121 aa9.88□□□□□ -0.83
BBX-201ENST00000325805 PPARGC1BQ86YN6 1023 aaKnown RBP9.61□□□□□ -0.87
BBX-201ENST00000325805 CCDC180Q9P1Z9 1646 aa9.54□□□□□ -0.88
BBX-201ENST00000325805 HRCP23327 699 aa9.46□□□□□ -0.9
BBX-201ENST00000325805 ABCC9O60706 1549 aa9.44□□□□□ -0.9
BBX-201ENST00000325805 PCGF6Q9BYE7 350 aa9.44□□□□□ -0.9
BBX-201ENST00000325805 PRKCSHP14314 528 aaPredicted RBP9.39□□□□□ -0.91
BBX-201ENST00000325805 SCAF1Q9H7N4 1312 aaKnown RBP9.38□□□□□ -0.91
BBX-201ENST00000325805 BCL11AQ9H165 835 aa9.35□□□□□ -0.91
BBX-201ENST00000325805 TTBK1Q5TCY1 1321 aaPredicted RBP9.25□□□□□ -0.93
BBX-201ENST00000325805 ERICH6Q7L0X2 663 aa9.23□□□□□ -0.93
BBX-201ENST00000325805 CENPBP07199 599 aaPredicted RBP9.21□□□□□ -0.94
BBX-201ENST00000325805 FAM9AQ8IZU1 332 aaPredicted RBP9.19□□□□□ -0.94
BBX-201ENST00000325805 GTF3C3Q9Y5Q9 886 aa9.18□□□□□ -0.94
BBX-201ENST00000325805 RB1CC1Q8TDY2 1594 aa9.1□□□□□ -0.95
BBX-201ENST00000325805 DCAF8L2P0C7V8 631 aa9.09□□□□□ -0.95
BBX-201ENST00000325805 YTHDC1Q96MU7 727 aaKnown RBP9.08□□□□□ -0.96
BBX-201ENST00000325805 NACADO15069 1562 aa9.06□□□□□ -0.96
BBX-201ENST00000325805 NEUROD1Q13562 356 aa9□□□□□ -0.97
BBX-201ENST00000325805 ACIN1Q9UKV3 1341 aaKnown RBP8.98□□□□□ -0.97
BBX-201ENST00000325805 MYO15BQ96JP2 1530 aa8.98□□□□□ -0.97
BBX-201ENST00000325805 SLC24A1O60721 1099 aa8.88□□□□□ -0.99
BBX-201ENST00000325805 DCAF1Q9Y4B6 1507 aa8.88□□□□□ -0.99
BBX-201ENST00000325805 CSRNP3Q8WYN3 585 aa8.87□□□□□ -0.99
BBX-201ENST00000325805 ZCCHC6Q5VYS8 1495 aaKnown RBP8.86□□□□□ -0.99
BBX-201ENST00000325805 ANP32EQ9BTT0 268 aa8.84□□□□□ -0.99
BBX-201ENST00000325805 CCDC136Q96JN2 1154 aa8.83□□□□□ -1
BBX-201ENST00000325805 SUPT5HO00267 1087 aaKnown RBP8.82□□□□□ -1
BBX-201ENST00000325805 PABPN1Q86U42 306 aaKnown RBP eCLIP8.81□□□□□ -1
BBX-201ENST00000325805 ANO8Q9HCE9 1232 aaPredicted RBP8.81□□□□□ -1
BBX-201ENST00000325805 EIF5BO60841 1220 aaKnown RBP8.81□□□□□ -1
BBX-201ENST00000325805 SHROOM4Q9ULL8 1493 aa8.79□□□□□ -1
BBX-201ENST00000325805 ZEB1P37275 1124 aaPredicted RBP8.77□□□□□ -1.01
BBX-201ENST00000325805 APLP2Q06481 763 aa8.76□□□□□ -1.01
BBX-201ENST00000325805 UNC13AQ9UPW8 1703 aa8.75□□□□□ -1.01
BBX-201ENST00000325805 CHIC1Q5VXU3 224 aa8.72□□□□□ -1.01
BBX-201ENST00000325805 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.71□□□□□ -1.01
BBX-201ENST00000325805 PLEKHG5O94827 1062 aa8.71□□□□□ -1.02
BBX-201ENST00000325805 EHMT2Q96KQ7 1210 aa8.7□□□□□ -1.02
BBX-201ENST00000325805 BCANQ96GW7 911 aa8.68□□□□□ -1.02
BBX-201ENST00000325805 RTN4Q9NQC3 1192 aaKnown RBP8.68□□□□□ -1.02
BBX-201ENST00000325805 DIEXFQ68CQ4 756 aaKnown RBP8.67□□□□□ -1.02
BBX-201ENST00000325805 DNAJC5BQ9UF47 199 aa8.67□□□□□ -1.02
BBX-201ENST00000325805 BICRAQ9NZM4 1560 aa8.66□□□□□ -1.02
BBX-201ENST00000325805 SCRIBQ14160 1630 aa8.65□□□□□ -1.03
BBX-201ENST00000325805 AEBP2Q6ZN18 517 aaPredicted RBP8.62□□□□□ -1.03
BBX-201ENST00000325805 CCER1Q8TC90 406 aaPredicted RBP8.6□□□□□ -1.03
BBX-201ENST00000325805 SALL2Q9Y467 1007 aaPredicted RBP8.59□□□□□ -1.03
BBX-201ENST00000325805 TRIM26Q12899 539 aaPredicted RBP8.59□□□□□ -1.03
BBX-201ENST00000325805 PODXL2Q9NZ53 605 aa8.58□□□□□ -1.04
BBX-201ENST00000325805 CECR2Q9BXF3 1484 aa8.54□□□□□ -1.04
BBX-201ENST00000325805 LOC105371045A0A1W2PR82 267 aa8.53□□□□□ -1.04
BBX-201ENST00000325805 EIF4G1Q04637 1599 aaKnown RBP8.52□□□□□ -1.04
BBX-201ENST00000325805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.51□□□□□ -1.05
BBX-201ENST00000325805 NBR1Q14596 966 aa8.5□□□□□ -1.05
BBX-201ENST00000325805 PKNOX2Q96KN3 472 aa8.5□□□□□ -1.05
BBX-201ENST00000325805 CC2D2AQ9P2K1 1620 aa8.49□□□□□ -1.05
BBX-201ENST00000325805 A0A0U1RQG5 324 aaPredicted RBP8.49□□□□□ -1.05
BBX-201ENST00000325805 TSHZ2Q9NRE2 1034 aa8.46□□□□□ -1.06
BBX-201ENST00000325805 DEKP35659 375 aaKnown RBP8.45□□□□□ -1.06
BBX-201ENST00000325805 RANGAP1P46060 587 aaPredicted RBP8.43□□□□□ -1.06
BBX-201ENST00000325805 ITGAEP38570 1179 aa8.41□□□□□ -1.06
BBX-201ENST00000325805 DAXXQ9UER7 740 aaPredicted RBP8.4□□□□□ -1.06
BBX-201ENST00000325805 RTL5Q5HYW3 569 aaPredicted RBP8.4□□□□□ -1.07
BBX-201ENST00000325805 UBE2Q2Q8WVN8 375 aa8.38□□□□□ -1.07
BBX-201ENST00000325805 NEFLP07196 543 aa8.38□□□□□ -1.07
BBX-201ENST00000325805 TIMELESSQ9UNS1 1208 aa8.38□□□□□ -1.07
BBX-201ENST00000325805 SUPT16HQ9Y5B9 1047 aaKnown RBP8.35□□□□□ -1.07
BBX-201ENST00000325805 NCAPD3P42695 1498 aa8.35□□□□□ -1.07
BBX-201ENST00000325805 SMARCA2P51531 1590 aa8.35□□□□□ -1.07
BBX-201ENST00000325805 VSIG10Q8N0Z9 540 aa8.34□□□□□ -1.07
BBX-201ENST00000325805 BAZ1AQ9NRL2 1556 aaPredicted RBP8.33□□□□□ -1.08
BBX-201ENST00000325805 MIER1Q8N108 512 aa8.33□□□□□ -1.08
BBX-201ENST00000325805 GLIPR1L2Q4G1C9 344 aa8.33□□□□□ -1.08
BBX-201ENST00000325805 MYT1LQ9UL68 1186 aa8.32□□□□□ -1.08
BBX-201ENST00000325805 FKBP8Q14318 412 aa8.32□□□□□ -1.08
BBX-201ENST00000325805 RBM19Q9Y4C8 960 aaKnown RBP8.32□□□□□ -1.08
BBX-201ENST00000325805 IL27Q8NEV9 243 aa8.3□□□□□ -1.08
BBX-201ENST00000325805 ATAD2BQ9ULI0 1458 aa8.3□□□□□ -1.08
BBX-201ENST00000325805 HMGXB3Q12766 1538 aa8.28□□□□□ -1.08
BBX-201ENST00000325805 BAZ1BQ9UIG0 1483 aaKnown RBP8.28□□□□□ -1.08
BBX-201ENST00000325805 SMARCA4P51532 1647 aa8.28□□□□□ -1.08
BBX-201ENST00000325805 ERCC6Q03468 1493 aa8.26□□□□□ -1.09
BBX-201ENST00000325805 PEG3Q9GZU2 1588 aa8.24□□□□□ -1.09
BBX-201ENST00000325805 ZNF316A6NFI3 1004 aaPredicted RBP8.21□□□□□ -1.09
BBX-201ENST00000325805 PDE4CQ08493 712 aa8.21□□□□□ -1.09
BBX-201ENST00000325805 AMER1Q5JTC6 1135 aaPredicted RBP8.2□□□□□ -1.1
BBX-201ENST00000325805 CUX2O14529 1486 aa8.19□□□□□ -1.1
BBX-201ENST00000325805 ARID4BQ4LE39 1312 aaPredicted RBP8.19□□□□□ -1.1
BBX-201ENST00000325805 CDK11AQ9UQ88 783 aaPredicted RBP8.19□□□□□ -1.1
BBX-201ENST00000325805 CLSPNQ9HAW4 1339 aa8.18□□□□□ -1.1
BBX-201ENST00000325805 PDS5BQ9NTI5 1447 aa8.18□□□□□ -1.1
BBX-201ENST00000325805 MROH2BQ7Z745 1585 aa8.17□□□□□ -1.1
BBX-201ENST00000325805 ZMYND15Q9H091 742 aa8.16□□□□□ -1.1
BBX-201ENST00000325805 IRX6P78412 446 aaPredicted RBP8.15□□□□□ -1.1
BBX-201ENST00000325805 LAMC3Q9Y6N6 1575 aa8.14□□□□□ -1.11
BBX-201ENST00000325805 ERICH6BQ5W0A0 696 aa8.14□□□□□ -1.11
BBX-201ENST00000325805 MSH5O43196 834 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms