RNA–Protein interactions for RNA: ENST00000324068.1

CAPN6-201, Transcript of calpain 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN6, Length 3,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6-201ENST00000324068 NISCHQ9Y2I1 1504 aa14.28□□□□□ -0.12
CAPN6-201ENST00000324068 CCDC180Q9P1Z9 1646 aa12.83□□□□□ -0.36
CAPN6-201ENST00000324068 DCAF1Q9Y4B6 1507 aa12.05□□□□□ -0.48
CAPN6-201ENST00000324068 ZCCHC6Q5VYS8 1495 aaKnown RBP12.04□□□□□ -0.48
CAPN6-201ENST00000324068 MYO15BQ96JP2 1530 aa12.02□□□□□ -0.48
CAPN6-201ENST00000324068 NACADO15069 1562 aa11.83□□□□□ -0.52
CAPN6-201ENST00000324068 ABCC9O60706 1549 aa11.76□□□□□ -0.53
CAPN6-201ENST00000324068 RB1CC1Q8TDY2 1594 aa11.71□□□□□ -0.53
CAPN6-201ENST00000324068 UNC13AQ9UPW8 1703 aa11.66□□□□□ -0.54
CAPN6-201ENST00000324068 AEBP2Q6ZN18 517 aaPredicted RBP11.53□□□□□ -0.56
CAPN6-201ENST00000324068 SHROOM4Q9ULL8 1493 aa11.49□□□□□ -0.57
CAPN6-201ENST00000324068 CHIC1Q5VXU3 224 aa11.48□□□□□ -0.57
CAPN6-201ENST00000324068 BICRAQ9NZM4 1560 aa11.45□□□□□ -0.58
CAPN6-201ENST00000324068 SCRIBQ14160 1630 aa11.39□□□□□ -0.59
CAPN6-201ENST00000324068 PEG3Q9GZU2 1588 aa11.13□□□□□ -0.63
CAPN6-201ENST00000324068 SMARCA4P51532 1647 aa11.08□□□□□ -0.64
CAPN6-201ENST00000324068 BAZ1AQ9NRL2 1556 aaPredicted RBP11.05□□□□□ -0.64
CAPN6-201ENST00000324068 DCAF8L2P0C7V8 631 aa11.05□□□□□ -0.64
CAPN6-201ENST00000324068 EIF4G1Q04637 1599 aaKnown RBP11.02□□□□□ -0.65
CAPN6-201ENST00000324068 CECR2Q9BXF3 1484 aa10.96□□□□□ -0.66
CAPN6-201ENST00000324068 MROH2BQ7Z745 1585 aa10.95□□□□□ -0.66
CAPN6-201ENST00000324068 SMARCA2P51531 1590 aa10.95□□□□□ -0.66
CAPN6-201ENST00000324068 HMGXB3Q12766 1538 aa10.94□□□□□ -0.66
CAPN6-201ENST00000324068 RSF1Q96T23 1441 aaPredicted RBP10.89□□□□□ -0.67
CAPN6-201ENST00000324068 CC2D2AQ9P2K1 1620 aa10.88□□□□□ -0.67
CAPN6-201ENST00000324068 WIZO95785 1651 aa10.88□□□□□ -0.67
CAPN6-201ENST00000324068 TOP2AP11388 1531 aaKnown RBP10.86□□□□□ -0.67
CAPN6-201ENST00000324068 NCAPD3P42695 1498 aa10.84□□□□□ -0.67
CAPN6-201ENST00000324068 ATAD2BQ9ULI0 1458 aa10.84□□□□□ -0.67
CAPN6-201ENST00000324068 PABPN1Q86U42 306 aaKnown RBP eCLIP10.83□□□□□ -0.67
CAPN6-201ENST00000324068 PRDM2Q13029 1718 aa10.78□□□□□ -0.68
CAPN6-201ENST00000324068 BAZ1BQ9UIG0 1483 aaKnown RBP10.69□□□□□ -0.7
CAPN6-201ENST00000324068 CCDC88BA6NC98 1476 aa10.58□□□□□ -0.72
CAPN6-201ENST00000324068 LAMC3Q9Y6N6 1575 aa10.57□□□□□ -0.72
CAPN6-201ENST00000324068 CFTRP13569 1480 aa10.53□□□□□ -0.72
CAPN6-201ENST00000324068 DNAJC5BQ9UF47 199 aa10.49□□□□□ -0.73
CAPN6-201ENST00000324068 BIVM-ERCC5R4GMW8 1640 aa10.45□□□□□ -0.74
CAPN6-201ENST00000324068 KIF21AQ7Z4S6 1674 aa10.44□□□□□ -0.74
CAPN6-201ENST00000324068 THOC2Q8NI27 1593 aaKnown RBP10.41□□□□□ -0.74
CAPN6-201ENST00000324068 CADPSQ9ULU8 1353 aa10.4□□□□□ -0.74
CAPN6-201ENST00000324068 PHF23Q9BUL5 403 aaPredicted RBP10.38□□□□□ -0.75
CAPN6-201ENST00000324068 WDR97A6NE52 1622 aa10.37□□□□□ -0.75
CAPN6-201ENST00000324068 TOP2BQ02880 1626 aa10.36□□□□□ -0.75
CAPN6-201ENST00000324068 WDR62O43379 1518 aa10.35□□□□□ -0.75
CAPN6-201ENST00000324068 NESP48681 1621 aa10.33□□□□□ -0.76
CAPN6-201ENST00000324068 DNMBPQ6XZF7 1577 aa10.33□□□□□ -0.76
CAPN6-201ENST00000324068 SUPT5HO00267 1087 aaKnown RBP10.31□□□□□ -0.76
CAPN6-201ENST00000324068 SYNJ1O43426 1573 aa10.31□□□□□ -0.76
CAPN6-201ENST00000324068 FANCD2Q9BXW9 1451 aa10.3□□□□□ -0.76
CAPN6-201ENST00000324068 CUX1P39880 1505 aa10.29□□□□□ -0.76
CAPN6-201ENST00000324068 PDS5BQ9NTI5 1447 aa10.28□□□□□ -0.76
CAPN6-201ENST00000324068 ABCC8Q09428 1581 aa10.27□□□□□ -0.77
CAPN6-201ENST00000324068 CEP164Q9UPV0 1460 aa10.27□□□□□ -0.77
CAPN6-201ENST00000324068 PELP1Q8IZL8 1130 aaKnown RBP10.27□□□□□ -0.77
CAPN6-201ENST00000324068 URB2Q14146 1524 aaKnown RBP10.26□□□□□ -0.77
CAPN6-201ENST00000324068 MRC2Q9UBG0 1479 aa10.26□□□□□ -0.77
CAPN6-201ENST00000324068 TARBP1Q13395 1621 aaKnown RBP10.25□□□□□ -0.77
CAPN6-201ENST00000324068 TOPBP1Q92547 1522 aa10.23□□□□□ -0.77
CAPN6-201ENST00000324068 ABCA5Q8WWZ7 1642 aa10.21□□□□□ -0.78
CAPN6-201ENST00000324068 WRNQ14191 1432 aaPredicted RBP eCLIP10.19□□□□□ -0.78
CAPN6-201ENST00000324068 MYT1Q01538 1121 aa10.18□□□□□ -0.78
CAPN6-201ENST00000324068 CUX2O14529 1486 aa10.16□□□□□ -0.78
CAPN6-201ENST00000324068 ABCA10Q8WWZ4 1543 aa10.15□□□□□ -0.78
CAPN6-201ENST00000324068 POLA1P09884 1462 aaPredicted RBP10.15□□□□□ -0.79
CAPN6-201ENST00000324068 PBRM1Q86U86 1689 aa10.14□□□□□ -0.79
CAPN6-201ENST00000324068 FGD5Q6ZNL6 1462 aa10.13□□□□□ -0.79
CAPN6-201ENST00000324068 IFT140Q96RY7 1462 aa10.1□□□□□ -0.79
CAPN6-201ENST00000324068 EIF4G3O43432 1585 aaKnown RBP10.09□□□□□ -0.79
CAPN6-201ENST00000324068 CUL7Q14999 1698 aa10.08□□□□□ -0.8
CAPN6-201ENST00000324068 ERCC6Q03468 1493 aa10.07□□□□□ -0.8
CAPN6-201ENST00000324068 ERICH3Q5RHP9 1530 aa10.07□□□□□ -0.8
CAPN6-201ENST00000324068 KIF21BO75037 1637 aa10.06□□□□□ -0.8
CAPN6-201ENST00000324068 EEA1Q15075 1411 aa10.05□□□□□ -0.8
CAPN6-201ENST00000324068 ADAMTS12P58397 1594 aa10.04□□□□□ -0.8
CAPN6-201ENST00000324068 RAD54L2Q9Y4B4 1467 aa9.98□□□□□ -0.81
CAPN6-201ENST00000324068 SOGA1O94964 1423 aa9.97□□□□□ -0.81
CAPN6-201ENST00000324068 PRXQ9BXM0 1461 aa9.97□□□□□ -0.81
CAPN6-201ENST00000324068 CTTNBP2Q8WZ74 1663 aa9.96□□□□□ -0.81
CAPN6-201ENST00000324068 MAGI1Q96QZ7 1491 aaPredicted RBP9.95□□□□□ -0.82
CAPN6-201ENST00000324068 ZNF608Q9ULD9 1512 aaPredicted RBP9.95□□□□□ -0.82
CAPN6-201ENST00000324068 KIF27Q86VH2 1401 aa9.93□□□□□ -0.82
CAPN6-201ENST00000324068 GRIN2BQ13224 1484 aa9.93□□□□□ -0.82
CAPN6-201ENST00000324068 GAPVD1Q14C86 1478 aa9.93□□□□□ -0.82
CAPN6-201ENST00000324068 RUSC2Q8N2Y8 1516 aa9.93□□□□□ -0.82
CAPN6-201ENST00000324068 CHD1O14646 1710 aa9.92□□□□□ -0.82
CAPN6-201ENST00000324068 SHROOM2Q13796 1616 aa9.91□□□□□ -0.82
CAPN6-201ENST00000324068 CLASP1Q7Z460 1538 aa9.88□□□□□ -0.83
CAPN6-201ENST00000324068 IGF1RP08069 1367 aa9.87□□□□□ -0.83
CAPN6-201ENST00000324068 SYNJ2O15056 1496 aa9.87□□□□□ -0.83
CAPN6-201ENST00000324068 FHAD1B1AJZ9 1412 aa9.86□□□□□ -0.83
CAPN6-201ENST00000324068 SNAPC4Q5SXM2 1469 aa9.86□□□□□ -0.83
CAPN6-201ENST00000324068 CEP170Q5SW79 1584 aa9.85□□□□□ -0.83
CAPN6-201ENST00000324068 SAMD9Q5K651 1589 aa9.85□□□□□ -0.83
CAPN6-201ENST00000324068 NUP160Q12769 1436 aa9.84□□□□□ -0.83
CAPN6-201ENST00000324068 AQRO60306 1485 aaKnown RBP eCLIP9.83□□□□□ -0.84
CAPN6-201ENST00000324068 TRIM41Q8WV44 630 aa9.83□□□□□ -0.84
CAPN6-201ENST00000324068 GRIN2AQ12879 1464 aa9.83□□□□□ -0.84
CAPN6-201ENST00000324068 RAPGEF2Q9Y4G8 1499 aa9.83□□□□□ -0.84
CAPN6-201ENST00000324068 GOLGA3Q08378 1498 aa9.82□□□□□ -0.84
CAPN6-201ENST00000324068 UGGT2Q9NYU1 1516 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 261.4 ms