RNA–Protein interactions for RNA: ENST00000316637.6

DEF6-201, Transcript of DEF6, guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEF6, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF6-201ENST00000316637 NISCHQ9Y2I1 1504 aa38.33■■■■□ 3.73
DEF6-201ENST00000316637 CCDC180Q9P1Z9 1646 aa33.44■■■□□ 2.94
DEF6-201ENST00000316637 ZCCHC6Q5VYS8 1495 aaKnown RBP32.15■■■□□ 2.74
DEF6-201ENST00000316637 ABCC9O60706 1549 aa32.04■■■□□ 2.72
DEF6-201ENST00000316637 DCAF8L2P0C7V8 631 aa31.89■■■□□ 2.7
DEF6-201ENST00000316637 DCAF1Q9Y4B6 1507 aa31.58■■■□□ 2.65
DEF6-201ENST00000316637 SHROOM4Q9ULL8 1493 aa31.3■■■□□ 2.6
DEF6-201ENST00000316637 MYO15BQ96JP2 1530 aa31.27■■■□□ 2.6
DEF6-201ENST00000316637 NACADO15069 1562 aa31.21■■■□□ 2.59
DEF6-201ENST00000316637 RB1CC1Q8TDY2 1594 aa31.03■■■□□ 2.56
DEF6-201ENST00000316637 SCRIBQ14160 1630 aa30.89■■■□□ 2.53
DEF6-201ENST00000316637 UNC13AQ9UPW8 1703 aa30.46■■■□□ 2.47
DEF6-201ENST00000316637 PABPN1Q86U42 306 aaKnown RBP eCLIP30.21■■■□□ 2.43
DEF6-201ENST00000316637 BICRAQ9NZM4 1560 aa30.18■■■□□ 2.42
DEF6-201ENST00000316637 SUPT5HO00267 1087 aaKnown RBP29.95■■■□□ 2.39
DEF6-201ENST00000316637 CECR2Q9BXF3 1484 aa29.91■■■□□ 2.38
DEF6-201ENST00000316637 RSF1Q96T23 1441 aaPredicted RBP29.69■■■□□ 2.34
DEF6-201ENST00000316637 MROH2BQ7Z745 1585 aa29.67■■■□□ 2.34
DEF6-201ENST00000316637 BAZ1AQ9NRL2 1556 aaPredicted RBP29.58■■■□□ 2.33
DEF6-201ENST00000316637 SMARCA4P51532 1647 aa29.52■■■□□ 2.32
DEF6-201ENST00000316637 WIZO95785 1651 aa29.41■■■□□ 2.3
DEF6-201ENST00000316637 EIF4G1Q04637 1599 aaKnown RBP29.28■■■□□ 2.28
DEF6-201ENST00000316637 ATAD2BQ9ULI0 1458 aa29.11■■■□□ 2.25
DEF6-201ENST00000316637 PEG3Q9GZU2 1588 aa29.1■■■□□ 2.25
DEF6-201ENST00000316637 TOP2AP11388 1531 aaKnown RBP29.03■■■□□ 2.24
DEF6-201ENST00000316637 SMARCA2P51531 1590 aa29.02■■■□□ 2.24
DEF6-201ENST00000316637 BAZ1BQ9UIG0 1483 aaKnown RBP28.93■■■□□ 2.22
DEF6-201ENST00000316637 CC2D2AQ9P2K1 1620 aa28.92■■■□□ 2.22
DEF6-201ENST00000316637 NCAPD3P42695 1498 aa28.85■■■□□ 2.21
DEF6-201ENST00000316637 CCDC88BA6NC98 1476 aa28.78■■■□□ 2.2
DEF6-201ENST00000316637 HMGXB3Q12766 1538 aa28.77■■■□□ 2.2
DEF6-201ENST00000316637 DNAJC5BQ9UF47 199 aa28.54■■■□□ 2.16
DEF6-201ENST00000316637 CHIC1Q5VXU3 224 aa28.48■■■□□ 2.15
DEF6-201ENST00000316637 CFTRP13569 1480 aa28.17■■■□□ 2.1
DEF6-201ENST00000316637 ABCC8Q09428 1581 aa28.17■■■□□ 2.1
DEF6-201ENST00000316637 CADPSQ9ULU8 1353 aa28.13■■■□□ 2.09
DEF6-201ENST00000316637 TRIM41Q8WV44 630 aa28.09■■■□□ 2.09
DEF6-201ENST00000316637 NESP48681 1621 aa28.07■■■□□ 2.08
DEF6-201ENST00000316637 PRDM2Q13029 1718 aa27.93■■■□□ 2.06
DEF6-201ENST00000316637 WRNQ14191 1432 aaPredicted RBP eCLIP27.93■■■□□ 2.06
DEF6-201ENST00000316637 LAMC3Q9Y6N6 1575 aa27.89■■■□□ 2.06
DEF6-201ENST00000316637 SYNJ1O43426 1573 aa27.87■■■□□ 2.05
DEF6-201ENST00000316637 FANCD2Q9BXW9 1451 aa27.84■■■□□ 2.05
DEF6-201ENST00000316637 CUX1P39880 1505 aa27.74■■■□□ 2.03
DEF6-201ENST00000316637 TOP2BQ02880 1626 aa27.7■■■□□ 2.02
DEF6-201ENST00000316637 PDS5BQ9NTI5 1447 aa27.69■■■□□ 2.02
DEF6-201ENST00000316637 FAM9AQ8IZU1 332 aaPredicted RBP27.69■■■□□ 2.02
DEF6-201ENST00000316637 CEP164Q9UPV0 1460 aa27.67■■■□□ 2.02
DEF6-201ENST00000316637 KIF21AQ7Z4S6 1674 aa27.66■■■□□ 2.02
DEF6-201ENST00000316637 BIVM-ERCC5R4GMW8 1640 aa27.65■■■□□ 2.02
DEF6-201ENST00000316637 SOGA1O94964 1423 aa27.58■■■□□ 2.01
DEF6-201ENST00000316637 URB2Q14146 1524 aaKnown RBP27.53■■■□□ 2
DEF6-201ENST00000316637 RUSC2Q8N2Y8 1516 aa27.52■■■□□ 2
DEF6-201ENST00000316637 TOPBP1Q92547 1522 aa27.51■■□□□ 1.99
DEF6-201ENST00000316637 DNMBPQ6XZF7 1577 aa27.5■■□□□ 1.99
DEF6-201ENST00000316637 FGD5Q6ZNL6 1462 aa27.47■■□□□ 1.99
DEF6-201ENST00000316637 LOC105371045A0A1W2PR82 267 aa27.47■■□□□ 1.99
DEF6-201ENST00000316637 ERCC6Q03468 1493 aa27.43■■□□□ 1.98
DEF6-201ENST00000316637 EHMT2Q96KQ7 1210 aa27.41■■□□□ 1.98
DEF6-201ENST00000316637 MRC2Q9UBG0 1479 aa27.39■■□□□ 1.97
DEF6-201ENST00000316637 POLA1P09884 1462 aaPredicted RBP27.38■■□□□ 1.97
DEF6-201ENST00000316637 RAD54L2Q9Y4B4 1467 aa27.34■■□□□ 1.97
DEF6-201ENST00000316637 EEA1Q15075 1411 aa27.29■■□□□ 1.96
DEF6-201ENST00000316637 CSRNP3Q8WYN3 585 aa27.27■■□□□ 1.96
DEF6-201ENST00000316637 CUX2O14529 1486 aa27.26■■□□□ 1.95
DEF6-201ENST00000316637 THOC2Q8NI27 1593 aaKnown RBP27.24■■□□□ 1.95
DEF6-201ENST00000316637 WDR62O43379 1518 aa27.24■■□□□ 1.95
DEF6-201ENST00000316637 KIF27Q86VH2 1401 aa27.21■■□□□ 1.95
DEF6-201ENST00000316637 ABCA10Q8WWZ4 1543 aa27.17■■□□□ 1.94
DEF6-201ENST00000316637 WDR97A6NE52 1622 aa27.1■■□□□ 1.93
DEF6-201ENST00000316637 TARBP1Q13395 1621 aaKnown RBP27.1■■□□□ 1.93
DEF6-201ENST00000316637 TDRD9Q8NDG6 1382 aaKnown RBP27.09■■□□□ 1.93
DEF6-201ENST00000316637 IGF1RP08069 1367 aa27.03■■□□□ 1.92
DEF6-201ENST00000316637 RAPGEF2Q9Y4G8 1499 aa27.01■■□□□ 1.91
DEF6-201ENST00000316637 KIF21BO75037 1637 aa27■■□□□ 1.91
DEF6-201ENST00000316637 IFT140Q96RY7 1462 aa26.99■■□□□ 1.91
DEF6-201ENST00000316637 GOLGA3Q08378 1498 aa26.98■■□□□ 1.91
DEF6-201ENST00000316637 PRXQ9BXM0 1461 aa26.98■■□□□ 1.91
DEF6-201ENST00000316637 ABCA5Q8WWZ7 1642 aa26.98■■□□□ 1.91
DEF6-201ENST00000316637 ZNF608Q9ULD9 1512 aaPredicted RBP26.98■■□□□ 1.91
DEF6-201ENST00000316637 AQRO60306 1485 aaKnown RBP eCLIP26.95■■□□□ 1.912e-6■■■□□ 15.1
DEF6-201ENST00000316637 GAPVD1Q14C86 1478 aa26.95■■□□□ 1.91
DEF6-201ENST00000316637 UBTFP17480 764 aaKnown RBP26.95■■□□□ 1.91
DEF6-201ENST00000316637 CARMIL1Q5VZK9 1371 aa26.89■■□□□ 1.89
DEF6-201ENST00000316637 ERICH3Q5RHP9 1530 aa26.85■■□□□ 1.89
DEF6-201ENST00000316637 TNIKQ9UKE5 1360 aa26.84■■□□□ 1.89
DEF6-201ENST00000316637 EIF4G3O43432 1585 aaKnown RBP26.82■■□□□ 1.88
DEF6-201ENST00000316637 PBRM1Q86U86 1689 aa26.8■■□□□ 1.88
DEF6-201ENST00000316637 CUL7Q14999 1698 aa26.77■■□□□ 1.88
DEF6-201ENST00000316637 GRIN2BQ13224 1484 aa26.76■■□□□ 1.87
DEF6-201ENST00000316637 CEP162Q5TB80 1403 aa26.75■■□□□ 1.87
DEF6-201ENST00000316637 RANGAP1P46060 587 aaPredicted RBP26.73■■□□□ 1.87
DEF6-201ENST00000316637 PCGF6Q9BYE7 350 aa26.72■■□□□ 1.87
DEF6-201ENST00000316637 SNAPC4Q5SXM2 1469 aa26.67■■□□□ 1.86
DEF6-201ENST00000316637 ADAMTS12P58397 1594 aa26.65■■□□□ 1.86
DEF6-201ENST00000316637 HRCP23327 699 aa26.64■■□□□ 1.86
DEF6-201ENST00000316637 FHAD1B1AJZ9 1412 aa26.63■■□□□ 1.85
DEF6-201ENST00000316637 CLIP1P30622 1438 aa26.58■■□□□ 1.85
DEF6-201ENST00000316637 MAGI1Q96QZ7 1491 aaPredicted RBP26.53■■□□□ 1.84
DEF6-201ENST00000316637 FBLN2P98095 1184 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms