RNA–Protein interactions for RNA: ENST00000311604.7

LSP1-201, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LSP1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-201ENST00000311604 NISCHQ9Y2I1 1504 aa40.04■■■■■ 4
LSP1-201ENST00000311604 CCDC180Q9P1Z9 1646 aa34.9■■■■□ 3.18
LSP1-201ENST00000311604 ZCCHC6Q5VYS8 1495 aaKnown RBP33.67■■■□□ 2.98
LSP1-201ENST00000311604 ABCC9O60706 1549 aa33.51■■■□□ 2.95
LSP1-201ENST00000311604 DCAF1Q9Y4B6 1507 aa33.11■■■□□ 2.89
LSP1-201ENST00000311604 DCAF8L2P0C7V8 631 aa32.97■■■□□ 2.87
LSP1-201ENST00000311604 MYO15BQ96JP2 1530 aa32.69■■■□□ 2.82
LSP1-201ENST00000311604 SHROOM4Q9ULL8 1493 aa32.6■■■□□ 2.81
LSP1-201ENST00000311604 NACADO15069 1562 aa32.47■■■□□ 2.79
LSP1-201ENST00000311604 RB1CC1Q8TDY2 1594 aa32.36■■■□□ 2.77
LSP1-201ENST00000311604 SCRIBQ14160 1630 aa32.09■■■□□ 2.73
LSP1-201ENST00000311604 UNC13AQ9UPW8 1703 aa31.69■■■□□ 2.66
LSP1-201ENST00000311604 PABPN1Q86U42 306 aaKnown RBP eCLIP31.54■■■□□ 2.64
LSP1-201ENST00000311604 BICRAQ9NZM4 1560 aa31.42■■■□□ 2.62
LSP1-201ENST00000311604 SUPT5HO00267 1087 aaKnown RBP31.31■■■□□ 2.6
LSP1-201ENST00000311604 CECR2Q9BXF3 1484 aa31.16■■■□□ 2.58
LSP1-201ENST00000311604 RSF1Q96T23 1441 aaPredicted RBP31.07■■■□□ 2.56
LSP1-201ENST00000311604 MROH2BQ7Z745 1585 aa30.97■■■□□ 2.55
LSP1-201ENST00000311604 BAZ1AQ9NRL2 1556 aaPredicted RBP30.85■■■□□ 2.53
LSP1-201ENST00000311604 SMARCA4P51532 1647 aa30.79■■■□□ 2.52
LSP1-201ENST00000311604 WIZO95785 1651 aa30.72■■■□□ 2.51
LSP1-201ENST00000311604 EIF4G1Q04637 1599 aaKnown RBP30.53■■■□□ 2.48
LSP1-201ENST00000311604 PEG3Q9GZU2 1588 aa30.43■■■□□ 2.46
LSP1-201ENST00000311604 TOP2AP11388 1531 aaKnown RBP30.36■■■□□ 2.45
LSP1-201ENST00000311604 DNAJC5BQ9UF47 199 aa30.27■■■□□ 2.44
LSP1-201ENST00000311604 CC2D2AQ9P2K1 1620 aa30.26■■■□□ 2.44
LSP1-201ENST00000311604 ATAD2BQ9ULI0 1458 aa30.26■■■□□ 2.43
LSP1-201ENST00000311604 SMARCA2P51531 1590 aa30.18■■■□□ 2.42
LSP1-201ENST00000311604 CHIC1Q5VXU3 224 aa30.07■■■□□ 2.41
LSP1-201ENST00000311604 CCDC88BA6NC98 1476 aa30.06■■■□□ 2.4
LSP1-201ENST00000311604 BAZ1BQ9UIG0 1483 aaKnown RBP30.02■■■□□ 2.4
LSP1-201ENST00000311604 NCAPD3P42695 1498 aa30.02■■■□□ 2.4
LSP1-201ENST00000311604 HMGXB3Q12766 1538 aa29.95■■■□□ 2.38
LSP1-201ENST00000311604 ABCC8Q09428 1581 aa29.45■■■□□ 2.31
LSP1-201ENST00000311604 TRIM41Q8WV44 630 aa29.39■■■□□ 2.3
LSP1-201ENST00000311604 CFTRP13569 1480 aa29.33■■■□□ 2.29
LSP1-201ENST00000311604 PRDM2Q13029 1718 aa29.23■■■□□ 2.27
LSP1-201ENST00000311604 CADPSQ9ULU8 1353 aa29.22■■■□□ 2.27
LSP1-201ENST00000311604 NESP48681 1621 aa29.21■■■□□ 2.27
LSP1-201ENST00000311604 WRNQ14191 1432 aaPredicted RBP eCLIP29.18■■■□□ 2.26
LSP1-201ENST00000311604 SYNJ1O43426 1573 aa29.17■■■□□ 2.26
LSP1-201ENST00000311604 LAMC3Q9Y6N6 1575 aa29.07■■■□□ 2.24
LSP1-201ENST00000311604 BIVM-ERCC5R4GMW8 1640 aa29■■■□□ 2.23
LSP1-201ENST00000311604 TOP2BQ02880 1626 aa29■■■□□ 2.23
LSP1-201ENST00000311604 CUX1P39880 1505 aa28.96■■■□□ 2.23
LSP1-201ENST00000311604 LOC105371045A0A1W2PR82 267 aa28.92■■■□□ 2.22
LSP1-201ENST00000311604 PDS5BQ9NTI5 1447 aa28.91■■■□□ 2.22
LSP1-201ENST00000311604 FAM9AQ8IZU1 332 aaPredicted RBP28.89■■■□□ 2.22
LSP1-201ENST00000311604 SOGA1O94964 1423 aa28.88■■■□□ 2.21
LSP1-201ENST00000311604 FANCD2Q9BXW9 1451 aa28.88■■■□□ 2.21
LSP1-201ENST00000311604 RUSC2Q8N2Y8 1516 aa28.83■■■□□ 2.21
LSP1-201ENST00000311604 KIF21AQ7Z4S6 1674 aa28.77■■■□□ 2.2
LSP1-201ENST00000311604 ERCC6Q03468 1493 aa28.77■■■□□ 2.2
LSP1-201ENST00000311604 CEP164Q9UPV0 1460 aa28.75■■■□□ 2.19
LSP1-201ENST00000311604 EEA1Q15075 1411 aa28.71■■■□□ 2.19
LSP1-201ENST00000311604 DNMBPQ6XZF7 1577 aa28.64■■■□□ 2.17
LSP1-201ENST00000311604 TOPBP1Q92547 1522 aa28.59■■■□□ 2.17
LSP1-201ENST00000311604 FGD5Q6ZNL6 1462 aa28.58■■■□□ 2.17
LSP1-201ENST00000311604 URB2Q14146 1524 aaKnown RBP28.58■■■□□ 2.17
LSP1-201ENST00000311604 CSRNP3Q8WYN3 585 aa28.56■■■□□ 2.16
LSP1-201ENST00000311604 MRC2Q9UBG0 1479 aa28.56■■■□□ 2.16
LSP1-201ENST00000311604 EHMT2Q96KQ7 1210 aa28.48■■■□□ 2.15
LSP1-201ENST00000311604 THOC2Q8NI27 1593 aaKnown RBP28.47■■■□□ 2.15
LSP1-201ENST00000311604 POLA1P09884 1462 aaPredicted RBP28.46■■■□□ 2.15
LSP1-201ENST00000311604 KIF21BO75037 1637 aa28.45■■■□□ 2.14
LSP1-201ENST00000311604 WDR62O43379 1518 aa28.41■■■□□ 2.14
LSP1-201ENST00000311604 KIF27Q86VH2 1401 aa28.39■■■□□ 2.14
LSP1-201ENST00000311604 RAD54L2Q9Y4B4 1467 aa28.37■■■□□ 2.13
LSP1-201ENST00000311604 CUX2O14529 1486 aa28.36■■■□□ 2.13
LSP1-201ENST00000311604 GOLGA3Q08378 1498 aa28.35■■■□□ 2.13
LSP1-201ENST00000311604 WDR97A6NE52 1622 aa28.34■■■□□ 2.13
LSP1-201ENST00000311604 ABCA10Q8WWZ4 1543 aa28.34■■■□□ 2.13
LSP1-201ENST00000311604 PRXQ9BXM0 1461 aa28.32■■■□□ 2.12
LSP1-201ENST00000311604 RAPGEF2Q9Y4G8 1499 aa28.29■■■□□ 2.12
LSP1-201ENST00000311604 TNIKQ9UKE5 1360 aa28.28■■■□□ 2.12
LSP1-201ENST00000311604 ERICH3Q5RHP9 1530 aa28.23■■■□□ 2.11
LSP1-201ENST00000311604 TARBP1Q13395 1621 aaKnown RBP28.22■■■□□ 2.11
LSP1-201ENST00000311604 IGF1RP08069 1367 aa28.22■■■□□ 2.11
LSP1-201ENST00000311604 ABCA5Q8WWZ7 1642 aa28.15■■■□□ 2.1
LSP1-201ENST00000311604 CEP162Q5TB80 1403 aa28.15■■■□□ 2.1
LSP1-201ENST00000311604 UBTFP17480 764 aaKnown RBP28.11■■■□□ 2.09
LSP1-201ENST00000311604 IFT140Q96RY7 1462 aa28.1■■■□□ 2.09
LSP1-201ENST00000311604 TDRD9Q8NDG6 1382 aaKnown RBP28.05■■■□□ 2.08
LSP1-201ENST00000311604 CARMIL1Q5VZK9 1371 aa28.03■■■□□ 2.08
LSP1-201ENST00000311604 ZNF608Q9ULD9 1512 aaPredicted RBP28.02■■■□□ 2.08
LSP1-201ENST00000311604 GAPVD1Q14C86 1478 aa28■■■□□ 2.07
LSP1-201ENST00000311604 CUL7Q14999 1698 aa27.98■■■□□ 2.07
LSP1-201ENST00000311604 AQRO60306 1485 aaKnown RBP eCLIP27.98■■■□□ 2.07
LSP1-201ENST00000311604 PBRM1Q86U86 1689 aa27.92■■■□□ 2.06
LSP1-201ENST00000311604 CLIP1P30622 1438 aa27.9■■■□□ 2.06
LSP1-201ENST00000311604 EIF4G3O43432 1585 aaKnown RBP27.84■■■□□ 2.05
LSP1-201ENST00000311604 GRIN2BQ13224 1484 aa27.77■■■□□ 2.04
LSP1-201ENST00000311604 ADAMTS12P58397 1594 aa27.77■■■□□ 2.04
LSP1-201ENST00000311604 ARAP1Q96P48 1450 aa27.73■■■□□ 2.03
LSP1-201ENST00000311604 CTTNBP2Q8WZ74 1663 aa27.72■■■□□ 2.03
LSP1-201ENST00000311604 ARHGAP35Q9NRY4 1499 aa27.7■■■□□ 2.03
LSP1-201ENST00000311604 FHAD1B1AJZ9 1412 aa27.69■■■□□ 2.02
LSP1-201ENST00000311604 VPS8Q8N3P4 1428 aa27.67■■■□□ 2.02
LSP1-201ENST00000311604 RANGAP1P46060 587 aaPredicted RBP27.67■■■□□ 2.02
LSP1-201ENST00000311604 SNAPC4Q5SXM2 1469 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms