RNA–Protein interactions for RNA: ENST00000310522.5

TRPV1-201, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPV1, Length 2,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-201ENST00000310522 NISCHQ9Y2I1 1504 aa30.15■■■□□ 2.42
TRPV1-201ENST00000310522 CCDC180Q9P1Z9 1646 aa26.13■■□□□ 1.77
TRPV1-201ENST00000310522 ZCCHC6Q5VYS8 1495 aaKnown RBP25.37■■□□□ 1.65
TRPV1-201ENST00000310522 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
TRPV1-201ENST00000310522 SHROOM4Q9ULL8 1493 aa24.92■■□□□ 1.58
TRPV1-201ENST00000310522 DCAF1Q9Y4B6 1507 aa24.81■■□□□ 1.56
TRPV1-201ENST00000310522 ABCC9O60706 1549 aa24.75■■□□□ 1.55
TRPV1-201ENST00000310522 MYO15BQ96JP2 1530 aa24.42■■□□□ 1.5
TRPV1-201ENST00000310522 NACADO15069 1562 aa24.29■■□□□ 1.48
TRPV1-201ENST00000310522 SCRIBQ14160 1630 aa24.23■■□□□ 1.47
TRPV1-201ENST00000310522 RB1CC1Q8TDY2 1594 aa24.07■■□□□ 1.44
TRPV1-201ENST00000310522 SUPT5HO00267 1087 aaKnown RBP24■■□□□ 1.43
TRPV1-201ENST00000310522 UNC13AQ9UPW8 1703 aa23.72■■□□□ 1.39
TRPV1-201ENST00000310522 CECR2Q9BXF3 1484 aa23.53■■□□□ 1.36
TRPV1-201ENST00000310522 RSF1Q96T23 1441 aaPredicted RBP23.5■■□□□ 1.35
TRPV1-201ENST00000310522 BICRAQ9NZM4 1560 aa23.46■■□□□ 1.35
TRPV1-201ENST00000310522 PABPN1Q86U42 306 aaKnown RBP eCLIP23.42■■□□□ 1.343e-7■■■■□ 25.8
TRPV1-201ENST00000310522 MROH2BQ7Z745 1585 aa23.38■■□□□ 1.33
TRPV1-201ENST00000310522 BAZ1AQ9NRL2 1556 aaPredicted RBP23.22■■□□□ 1.31
TRPV1-201ENST00000310522 WIZO95785 1651 aa23.21■■□□□ 1.31
TRPV1-201ENST00000310522 SMARCA4P51532 1647 aa23.16■■□□□ 1.3
TRPV1-201ENST00000310522 CHIC1Q5VXU3 224 aa23.01■■□□□ 1.27
TRPV1-201ENST00000310522 TOP2AP11388 1531 aaKnown RBP22.88■■□□□ 1.25
TRPV1-201ENST00000310522 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
TRPV1-201ENST00000310522 ATAD2BQ9ULI0 1458 aa22.73■■□□□ 1.23
TRPV1-201ENST00000310522 SMARCA2P51531 1590 aa22.72■■□□□ 1.23
TRPV1-201ENST00000310522 CCDC88BA6NC98 1476 aa22.71■■□□□ 1.23
TRPV1-201ENST00000310522 EIF4G1Q04637 1599 aaKnown RBP22.7■■□□□ 1.22
TRPV1-201ENST00000310522 BAZ1BQ9UIG0 1483 aaKnown RBP22.6■■□□□ 1.21
TRPV1-201ENST00000310522 NCAPD3P42695 1498 aa22.45■■□□□ 1.18
TRPV1-201ENST00000310522 TRIM41Q8WV44 630 aa22.45■■□□□ 1.18
TRPV1-201ENST00000310522 HMGXB3Q12766 1538 aa22.42■■□□□ 1.18
TRPV1-201ENST00000310522 ABCC8Q09428 1581 aa22.36■■□□□ 1.17
TRPV1-201ENST00000310522 CC2D2AQ9P2K1 1620 aa22.34■■□□□ 1.17
TRPV1-201ENST00000310522 LOC105371045A0A1W2PR82 267 aa22.23■■□□□ 1.15
TRPV1-201ENST00000310522 FAM9AQ8IZU1 332 aaPredicted RBP22.19■■□□□ 1.14
TRPV1-201ENST00000310522 WRNQ14191 1432 aaPredicted RBP eCLIP22.07■■□□□ 1.12
TRPV1-201ENST00000310522 SYNJ1O43426 1573 aa22.05■■□□□ 1.12
TRPV1-201ENST00000310522 CFTRP13569 1480 aa22.03■■□□□ 1.12
TRPV1-201ENST00000310522 EHMT2Q96KQ7 1210 aa21.97■■□□□ 1.11
TRPV1-201ENST00000310522 SOGA1O94964 1423 aa21.96■■□□□ 1.11
TRPV1-201ENST00000310522 DNAJC5BQ9UF47 199 aa21.93■■□□□ 1.1
TRPV1-201ENST00000310522 CADPSQ9ULU8 1353 aa21.92■■□□□ 1.1
TRPV1-201ENST00000310522 RUSC2Q8N2Y8 1516 aa21.91■■□□□ 1.1
TRPV1-201ENST00000310522 PRDM2Q13029 1718 aa21.9■■□□□ 1.1
TRPV1-201ENST00000310522 TOP2BQ02880 1626 aa21.87■■□□□ 1.09
TRPV1-201ENST00000310522 CUX1P39880 1505 aa21.84■■□□□ 1.09
TRPV1-201ENST00000310522 BIVM-ERCC5R4GMW8 1640 aa21.84■■□□□ 1.09
TRPV1-201ENST00000310522 NESP48681 1621 aa21.81■■□□□ 1.08
TRPV1-201ENST00000310522 EEA1Q15075 1411 aa21.73■■□□□ 1.07
TRPV1-201ENST00000310522 CSRNP3Q8WYN3 585 aa21.71■■□□□ 1.07
TRPV1-201ENST00000310522 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
TRPV1-201ENST00000310522 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
TRPV1-201ENST00000310522 FGD5Q6ZNL6 1462 aa21.55■■□□□ 1.04
TRPV1-201ENST00000310522 GOLGA3Q08378 1498 aa21.54■■□□□ 1.04
TRPV1-201ENST00000310522 KIF21BO75037 1637 aa21.53■■□□□ 1.04
TRPV1-201ENST00000310522 CEP164Q9UPV0 1460 aa21.53■■□□□ 1.04
TRPV1-201ENST00000310522 DNMBPQ6XZF7 1577 aa21.51■■□□□ 1.03
TRPV1-201ENST00000310522 TOPBP1Q92547 1522 aa21.5■■□□□ 1.03
TRPV1-201ENST00000310522 KIF21AQ7Z4S6 1674 aa21.5■■□□□ 1.03
TRPV1-201ENST00000310522 TNIKQ9UKE5 1360 aa21.49■■□□□ 1.03
TRPV1-201ENST00000310522 UBTFP17480 764 aaKnown RBP21.48■■□□□ 1.03
TRPV1-201ENST00000310522 RAPGEF2Q9Y4G8 1499 aa21.47■■□□□ 1.03
TRPV1-201ENST00000310522 URB2Q14146 1524 aaKnown RBP21.47■■□□□ 1.03
TRPV1-201ENST00000310522 PDS5BQ9NTI5 1447 aa21.47■■□□□ 1.03
TRPV1-201ENST00000310522 KIF27Q86VH2 1401 aa21.46■■□□□ 1.03
TRPV1-201ENST00000310522 CEP162Q5TB80 1403 aa21.45■■□□□ 1.02
TRPV1-201ENST00000310522 CUX2O14529 1486 aa21.45■■□□□ 1.02
TRPV1-201ENST00000310522 POLA1P09884 1462 aaPredicted RBP21.42■■□□□ 1.02
TRPV1-201ENST00000310522 RAD54L2Q9Y4B4 1467 aa21.42■■□□□ 1.02
TRPV1-201ENST00000310522 PRXQ9BXM0 1461 aa21.4■■□□□ 1.02
TRPV1-201ENST00000310522 PCGF6Q9BYE7 350 aa21.33■■□□□ 1.01
TRPV1-201ENST00000310522 ERICH3Q5RHP9 1530 aa21.32■■□□□ 1
TRPV1-201ENST00000310522 IGF1RP08069 1367 aa21.32■■□□□ 1
TRPV1-201ENST00000310522 ABCA10Q8WWZ4 1543 aa21.31■■□□□ 1
TRPV1-201ENST00000310522 WDR97A6NE52 1622 aa21.26■□□□□ 0.99
TRPV1-201ENST00000310522 PPARGC1BQ86YN6 1023 aaKnown RBP21.24■□□□□ 0.99
TRPV1-201ENST00000310522 MRC2Q9UBG0 1479 aa21.23■□□□□ 0.99
TRPV1-201ENST00000310522 CLIP1P30622 1438 aa21.23■□□□□ 0.99
TRPV1-201ENST00000310522 RANGAP1P46060 587 aaPredicted RBP21.23■□□□□ 0.99
TRPV1-201ENST00000310522 CARMIL1Q5VZK9 1371 aa21.19■□□□□ 0.98
TRPV1-201ENST00000310522 TDRD9Q8NDG6 1382 aaKnown RBP21.17■□□□□ 0.98
TRPV1-201ENST00000310522 TRIM26Q12899 539 aaPredicted RBP21.17■□□□□ 0.98
TRPV1-201ENST00000310522 TARBP1Q13395 1621 aaKnown RBP21.17■□□□□ 0.98
TRPV1-201ENST00000310522 ABCA5Q8WWZ7 1642 aa21.15■□□□□ 0.98
TRPV1-201ENST00000310522 ERCC6Q03468 1493 aa21.12■□□□□ 0.97
TRPV1-201ENST00000310522 WDR62O43379 1518 aa21.11■□□□□ 0.97
TRPV1-201ENST00000310522 GAPVD1Q14C86 1478 aa21.09■□□□□ 0.97
TRPV1-201ENST00000310522 CUL7Q14999 1698 aa21.06■□□□□ 0.96
TRPV1-201ENST00000310522 THOC2Q8NI27 1593 aaKnown RBP21.06■□□□□ 0.96
TRPV1-201ENST00000310522 ARAP1Q96P48 1450 aa21.05■□□□□ 0.96
TRPV1-201ENST00000310522 VPS8Q8N3P4 1428 aa21.04■□□□□ 0.96
TRPV1-201ENST00000310522 TTBK1Q5TCY1 1321 aaPredicted RBP21.04■□□□□ 0.96
TRPV1-201ENST00000310522 AQRO60306 1485 aaKnown RBP eCLIP21.02■□□□□ 0.961e-6■■■□□ 17.3
TRPV1-201ENST00000310522 ARHGAP35Q9NRY4 1499 aa21■□□□□ 0.95
TRPV1-201ENST00000310522 ZNF608Q9ULD9 1512 aaPredicted RBP20.99■□□□□ 0.95
TRPV1-201ENST00000310522 PBRM1Q86U86 1689 aa20.98■□□□□ 0.95
TRPV1-201ENST00000310522 IFT140Q96RY7 1462 aa20.97■□□□□ 0.95
TRPV1-201ENST00000310522 CTTNBP2Q8WZ74 1663 aa20.9■□□□□ 0.94
TRPV1-201ENST00000310522 ADAMTS12P58397 1594 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms