RNA–Protein interactions for RNA: ENST00000308475.10

DUSP13-201, Transcript of dual specificity phosphatase 13, humanhuman

TSL 1 (best)

Gene DUSP13, Length 1,110 nt, Biotype nonsense mediated decay, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP13-201ENST00000308475 NISCHQ9Y2I1 1504 aa46.44■■■■■ 5.02
DUSP13-201ENST00000308475 ABCC9O60706 1549 aa41.85■■■■■ 4.29
DUSP13-201ENST00000308475 CCDC180Q9P1Z9 1646 aa41.55■■■■■ 4.24
DUSP13-201ENST00000308475 RB1CC1Q8TDY2 1594 aa39.67■■■■□ 3.94
DUSP13-201ENST00000308475 DCAF8L2P0C7V8 631 aa39.44■■■■□ 3.9
DUSP13-201ENST00000308475 DNAJC5BQ9UF47 199 aa39.44■■■■□ 3.9
DUSP13-201ENST00000308475 NACADO15069 1562 aa39.37■■■■□ 3.89
DUSP13-201ENST00000308475 PABPN1Q86U42 306 aaKnown RBP eCLIP39.06■■■■□ 3.84
DUSP13-201ENST00000308475 MYO15BQ96JP2 1530 aa38.76■■■■□ 3.8
DUSP13-201ENST00000308475 UNC13AQ9UPW8 1703 aa38.75■■■■□ 3.79
DUSP13-201ENST00000308475 BICRAQ9NZM4 1560 aa38.57■■■■□ 3.77
DUSP13-201ENST00000308475 ZCCHC6Q5VYS8 1495 aaKnown RBP38.45■■■■□ 3.75
DUSP13-201ENST00000308475 DCAF1Q9Y4B6 1507 aa38.26■■■■□ 3.72
DUSP13-201ENST00000308475 SCRIBQ14160 1630 aa38.01■■■■□ 3.68
DUSP13-201ENST00000308475 SHROOM4Q9ULL8 1493 aa37.9■■■■□ 3.66
DUSP13-201ENST00000308475 CC2D2AQ9P2K1 1620 aa37.73■■■■□ 3.63
DUSP13-201ENST00000308475 CECR2Q9BXF3 1484 aa37.67■■■■□ 3.62
DUSP13-201ENST00000308475 EIF4G1Q04637 1599 aaKnown RBP37.62■■■■□ 3.61
DUSP13-201ENST00000308475 NCAPD3P42695 1498 aa36.41■■■■□ 3.42
DUSP13-201ENST00000308475 ATAD2BQ9ULI0 1458 aa36.31■■■■□ 3.4
DUSP13-201ENST00000308475 SMARCA4P51532 1647 aa36.2■■■■□ 3.39
DUSP13-201ENST00000308475 DNAJC5Q9H3Z4 198 aa36.17■■■■□ 3.38
DUSP13-201ENST00000308475 SMARCA2P51531 1590 aa36.13■■■■□ 3.37
DUSP13-201ENST00000308475 ERCC6Q03468 1493 aa36.1■■■■□ 3.37
DUSP13-201ENST00000308475 HMGXB3Q12766 1538 aa36.06■■■■□ 3.36
DUSP13-201ENST00000308475 BAZ1AQ9NRL2 1556 aaPredicted RBP36.01■■■■□ 3.35
DUSP13-201ENST00000308475 CUX2O14529 1486 aa35.98■■■■□ 3.35
DUSP13-201ENST00000308475 NESP48681 1621 aa35.95■■■■□ 3.35
DUSP13-201ENST00000308475 BAZ1BQ9UIG0 1483 aaKnown RBP35.94■■■■□ 3.34
DUSP13-201ENST00000308475 MROH2BQ7Z745 1585 aa35.83■■■■□ 3.33
DUSP13-201ENST00000308475 PEG3Q9GZU2 1588 aa35.81■■■■□ 3.32
DUSP13-201ENST00000308475 LAMC3Q9Y6N6 1575 aa35.54■■■■□ 3.28
DUSP13-201ENST00000308475 THOC2Q8NI27 1593 aaKnown RBP35.47■■■■□ 3.27
DUSP13-201ENST00000308475 PDS5BQ9NTI5 1447 aa35.4■■■■□ 3.26
DUSP13-201ENST00000308475 WIZO95785 1651 aa35.37■■■■□ 3.25
DUSP13-201ENST00000308475 KIF21AQ7Z4S6 1674 aa35.37■■■■□ 3.25
DUSP13-201ENST00000308475 CADPSQ9ULU8 1353 aa35.34■■■■□ 3.25
DUSP13-201ENST00000308475 MRC2Q9UBG0 1479 aa35.09■■■■□ 3.21
DUSP13-201ENST00000308475 RSF1Q96T23 1441 aaPredicted RBP35.07■■■■□ 3.21
DUSP13-201ENST00000308475 WDR62O43379 1518 aa34.97■■■■□ 3.19
DUSP13-201ENST00000308475 CEP164Q9UPV0 1460 aa34.94■■■■□ 3.18
DUSP13-201ENST00000308475 FANCD2Q9BXW9 1451 aa34.93■■■■□ 3.18
DUSP13-201ENST00000308475 CFTRP13569 1480 aa34.89■■■■□ 3.18
DUSP13-201ENST00000308475 TOP2AP11388 1531 aaKnown RBP34.86■■■■□ 3.17
DUSP13-201ENST00000308475 URB2Q14146 1524 aaKnown RBP34.66■■■■□ 3.14
DUSP13-201ENST00000308475 TRIM41Q8WV44 630 aa34.64■■■■□ 3.14
DUSP13-201ENST00000308475 CCDC88BA6NC98 1476 aa34.56■■■■□ 3.12
DUSP13-201ENST00000308475 OSCARQ8IYS5 282 aa34.45■■■■□ 3.11
DUSP13-201ENST00000308475 PRDM2Q13029 1718 aa34.36■■■■□ 3.09
DUSP13-201ENST00000308475 ZNF608Q9ULD9 1512 aaPredicted RBP34.28■■■■□ 3.08
DUSP13-201ENST00000308475 TOPBP1Q92547 1522 aa34.25■■■■□ 3.07
DUSP13-201ENST00000308475 IFT140Q96RY7 1462 aa34.24■■■■□ 3.07
DUSP13-201ENST00000308475 ABCC8Q09428 1581 aa34.1■■■■□ 3.05
DUSP13-201ENST00000308475 DNMBPQ6XZF7 1577 aa34.06■■■■□ 3.04
DUSP13-201ENST00000308475 EIF4G3O43432 1585 aaKnown RBP33.98■■■■□ 3.03
DUSP13-201ENST00000308475 AQRO60306 1485 aaKnown RBP eCLIP33.98■■■■□ 3.035e-6■■□□□ 14.3
DUSP13-201ENST00000308475 RIMBP3CA6NJZ7 1639 aa33.93■■■■□ 3.02
DUSP13-201ENST00000308475 RIMBP3BA6NNM3 1639 aa33.93■■■■□ 3.02
DUSP13-201ENST00000308475 RIMBP3Q9UFD9 1639 aa33.93■■■■□ 3.02
DUSP13-201ENST00000308475 TARBP1Q13395 1621 aaKnown RBP33.91■■■■□ 3.02
DUSP13-201ENST00000308475 POLA1P09884 1462 aaPredicted RBP33.9■■■■□ 3.02
DUSP13-201ENST00000308475 RAD54L2Q9Y4B4 1467 aa33.84■■■■□ 3.01
DUSP13-201ENST00000308475 ARHGEF11O15085 1522 aa33.84■■■■□ 3.01
DUSP13-201ENST00000308475 FBLN2P98095 1184 aa33.82■■■■□ 3
DUSP13-201ENST00000308475 SOGA1O94964 1423 aa33.79■■■■□ 3
DUSP13-201ENST00000308475 TDRD9Q8NDG6 1382 aaKnown RBP33.78■■■■□ 3
DUSP13-201ENST00000308475 CHD1O14646 1710 aa33.73■■■□□ 2.99
DUSP13-201ENST00000308475 CYB5RLQ6IPT4 315 aa33.71■■■□□ 2.99
DUSP13-201ENST00000308475 FGD5Q6ZNL6 1462 aa33.69■■■□□ 2.98
DUSP13-201ENST00000308475 CUX1P39880 1505 aa33.65■■■□□ 2.98
DUSP13-201ENST00000308475 SUPT5HO00267 1087 aaKnown RBP33.6■■■□□ 2.97
DUSP13-201ENST00000308475 SNAPC4Q5SXM2 1469 aa33.57■■■□□ 2.97
DUSP13-201ENST00000308475 ARAP1Q96P48 1450 aa33.51■■■□□ 2.96
DUSP13-201ENST00000308475 CHMP7Q8WUX9 453 aaPredicted RBP33.51■■■□□ 2.95
DUSP13-201ENST00000308475 GRIN2BQ13224 1484 aa33.44■■■□□ 2.94
DUSP13-201ENST00000308475 WDR97A6NE52 1622 aa33.44■■■□□ 2.94
DUSP13-201ENST00000308475 MAGI1Q96QZ7 1491 aaPredicted RBP33.42■■■□□ 2.94
DUSP13-201ENST00000308475 TRHP20396 242 aaPredicted RBP33.36■■■□□ 2.93
DUSP13-201ENST00000308475 CLASP1Q7Z460 1538 aa33.36■■■□□ 2.93
DUSP13-201ENST00000308475 GAPVD1Q14C86 1478 aa33.34■■■□□ 2.93
DUSP13-201ENST00000308475 SYNJ2O15056 1496 aa33.33■■■□□ 2.93
DUSP13-201ENST00000308475 SYNJ1O43426 1573 aa33.31■■■□□ 2.92
DUSP13-201ENST00000308475 ABCA10Q8WWZ4 1543 aa33.26■■■□□ 2.91
DUSP13-201ENST00000308475 PBRM1Q86U86 1689 aa33.23■■■□□ 2.91
DUSP13-201ENST00000308475 ABCA5Q8WWZ7 1642 aa33.18■■■□□ 2.9
DUSP13-201ENST00000308475 WRNQ14191 1432 aaPredicted RBP eCLIP33.15■■■□□ 2.9
DUSP13-201ENST00000308475 TOP2BQ02880 1626 aa33.02■■■□□ 2.88
DUSP13-201ENST00000308475 GRIN2AQ12879 1464 aa33.02■■■□□ 2.88
DUSP13-201ENST00000308475 BIVM-ERCC5R4GMW8 1640 aa32.99■■■□□ 2.87
DUSP13-201ENST00000308475 ADAMTS12P58397 1594 aa32.95■■■□□ 2.86
DUSP13-201ENST00000308475 ERCC6L2Q5T890 1561 aa32.93■■■□□ 2.86
DUSP13-201ENST00000308475 NUP160Q12769 1436 aa32.91■■■□□ 2.86
DUSP13-201ENST00000308475 CEP170Q5SW79 1584 aa32.91■■■□□ 2.86
DUSP13-201ENST00000308475 FHAD1B1AJZ9 1412 aa32.9■■■□□ 2.86
DUSP13-201ENST00000308475 ERICH3Q5RHP9 1530 aa32.82■■■□□ 2.84
DUSP13-201ENST00000308475 SHROOM2Q13796 1616 aa32.71■■■□□ 2.83
DUSP13-201ENST00000308475 JPH4Q96JJ6 628 aa32.66■■■□□ 2.82
DUSP13-201ENST00000308475 PRG4Q92954 1404 aaPredicted RBP32.66■■■□□ 2.82
DUSP13-201ENST00000308475 IGF1RP08069 1367 aa32.49■■■□□ 2.79
DUSP13-201ENST00000308475 RUSC2Q8N2Y8 1516 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms