RNA–Protein interactions for RNA: ENST00000302386.9

GABARAP-201, Transcript of GABA type A receptor-associated protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABARAP, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAP-201ENST00000302386 NISCHQ9Y2I1 1504 aa36.61■■■■□ 3.45
GABARAP-201ENST00000302386 CCDC180Q9P1Z9 1646 aa32.36■■■□□ 2.77
GABARAP-201ENST00000302386 ABCC9O60706 1549 aa31.34■■■□□ 2.61
GABARAP-201ENST00000302386 ZCCHC6Q5VYS8 1495 aaKnown RBP30.56■■■□□ 2.48
GABARAP-201ENST00000302386 DCAF8L2P0C7V8 631 aa30.49■■■□□ 2.47
GABARAP-201ENST00000302386 NACADO15069 1562 aa30.35■■■□□ 2.45
GABARAP-201ENST00000302386 DCAF1Q9Y4B6 1507 aa30.31■■■□□ 2.44
GABARAP-201ENST00000302386 MYO15BQ96JP2 1530 aa30.3■■■□□ 2.44
GABARAP-201ENST00000302386 RB1CC1Q8TDY2 1594 aa30.3■■■□□ 2.44
GABARAP-201ENST00000302386 UNC13AQ9UPW8 1703 aa29.62■■■□□ 2.33
GABARAP-201ENST00000302386 SCRIBQ14160 1630 aa29.56■■■□□ 2.32
GABARAP-201ENST00000302386 BICRAQ9NZM4 1560 aa29.38■■■□□ 2.29
GABARAP-201ENST00000302386 PABPN1Q86U42 306 aaKnown RBP eCLIP29.38■■■□□ 2.29
GABARAP-201ENST00000302386 SHROOM4Q9ULL8 1493 aa29.15■■■□□ 2.26
GABARAP-201ENST00000302386 EIF4G1Q04637 1599 aaKnown RBP28.57■■■□□ 2.16
GABARAP-201ENST00000302386 CECR2Q9BXF3 1484 aa28.49■■■□□ 2.15
GABARAP-201ENST00000302386 DNAJC5BQ9UF47 199 aa28.48■■■□□ 2.15
GABARAP-201ENST00000302386 CC2D2AQ9P2K1 1620 aa28.37■■■□□ 2.13
GABARAP-201ENST00000302386 BAZ1AQ9NRL2 1556 aaPredicted RBP28.35■■■□□ 2.13
GABARAP-201ENST00000302386 SMARCA4P51532 1647 aa28.32■■■□□ 2.12
GABARAP-201ENST00000302386 MROH2BQ7Z745 1585 aa28.22■■■□□ 2.11
GABARAP-201ENST00000302386 ATAD2BQ9ULI0 1458 aa28.09■■■□□ 2.09
GABARAP-201ENST00000302386 SMARCA2P51531 1590 aa28.06■■■□□ 2.08
GABARAP-201ENST00000302386 RSF1Q96T23 1441 aaPredicted RBP28.05■■■□□ 2.08
GABARAP-201ENST00000302386 PEG3Q9GZU2 1588 aa28.04■■■□□ 2.08
GABARAP-201ENST00000302386 NCAPD3P42695 1498 aa28.02■■■□□ 2.08
GABARAP-201ENST00000302386 WIZO95785 1651 aa27.93■■■□□ 2.06
GABARAP-201ENST00000302386 HMGXB3Q12766 1538 aa27.9■■■□□ 2.06
GABARAP-201ENST00000302386 BAZ1BQ9UIG0 1483 aaKnown RBP27.87■■■□□ 2.05
GABARAP-201ENST00000302386 TOP2AP11388 1531 aaKnown RBP27.64■■■□□ 2.02
GABARAP-201ENST00000302386 SUPT5HO00267 1087 aaKnown RBP27.63■■■□□ 2.01
GABARAP-201ENST00000302386 CCDC88BA6NC98 1476 aa27.35■■□□□ 1.97
GABARAP-201ENST00000302386 CADPSQ9ULU8 1353 aa27.24■■□□□ 1.95
GABARAP-201ENST00000302386 NESP48681 1621 aa27.24■■□□□ 1.95
GABARAP-201ENST00000302386 LAMC3Q9Y6N6 1575 aa27.21■■□□□ 1.95
GABARAP-201ENST00000302386 CFTRP13569 1480 aa27.14■■□□□ 1.94
GABARAP-201ENST00000302386 PDS5BQ9NTI5 1447 aa27.04■■□□□ 1.92
GABARAP-201ENST00000302386 ERCC6Q03468 1493 aa26.99■■□□□ 1.91
GABARAP-201ENST00000302386 PRDM2Q13029 1718 aa26.94■■□□□ 1.9
GABARAP-201ENST00000302386 KIF21AQ7Z4S6 1674 aa26.91■■□□□ 1.9
GABARAP-201ENST00000302386 FANCD2Q9BXW9 1451 aa26.91■■□□□ 1.9
GABARAP-201ENST00000302386 CEP164Q9UPV0 1460 aa26.83■■□□□ 1.89
GABARAP-201ENST00000302386 THOC2Q8NI27 1593 aaKnown RBP26.72■■□□□ 1.87
GABARAP-201ENST00000302386 MRC2Q9UBG0 1479 aa26.71■■□□□ 1.87
GABARAP-201ENST00000302386 WDR62O43379 1518 aa26.61■■□□□ 1.85
GABARAP-201ENST00000302386 URB2Q14146 1524 aaKnown RBP26.61■■□□□ 1.85
GABARAP-201ENST00000302386 CUX2O14529 1486 aa26.56■■□□□ 1.84
GABARAP-201ENST00000302386 ABCC8Q09428 1581 aa26.54■■□□□ 1.84
GABARAP-201ENST00000302386 TOPBP1Q92547 1522 aa26.52■■□□□ 1.84
GABARAP-201ENST00000302386 DNMBPQ6XZF7 1577 aa26.51■■□□□ 1.83
GABARAP-201ENST00000302386 CUX1P39880 1505 aa26.45■■□□□ 1.82
GABARAP-201ENST00000302386 WRNQ14191 1432 aaPredicted RBP eCLIP26.42■■□□□ 1.82
GABARAP-201ENST00000302386 SYNJ1O43426 1573 aa26.33■■□□□ 1.81
GABARAP-201ENST00000302386 POLA1P09884 1462 aaPredicted RBP26.32■■□□□ 1.8
GABARAP-201ENST00000302386 TOP2BQ02880 1626 aa26.32■■□□□ 1.8
GABARAP-201ENST00000302386 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
GABARAP-201ENST00000302386 BIVM-ERCC5R4GMW8 1640 aa26.3■■□□□ 1.8
GABARAP-201ENST00000302386 IFT140Q96RY7 1462 aa26.25■■□□□ 1.79
GABARAP-201ENST00000302386 SOGA1O94964 1423 aa26.23■■□□□ 1.79
GABARAP-201ENST00000302386 RAD54L2Q9Y4B4 1467 aa26.21■■□□□ 1.79
GABARAP-201ENST00000302386 TARBP1Q13395 1621 aaKnown RBP26.19■■□□□ 1.78
GABARAP-201ENST00000302386 ZNF608Q9ULD9 1512 aaPredicted RBP26.12■■□□□ 1.77
GABARAP-201ENST00000302386 TRIM41Q8WV44 630 aa26.08■■□□□ 1.77
GABARAP-201ENST00000302386 ABCA10Q8WWZ4 1543 aa26.08■■□□□ 1.76
GABARAP-201ENST00000302386 WDR97A6NE52 1622 aa26.05■■□□□ 1.76
GABARAP-201ENST00000302386 TDRD9Q8NDG6 1382 aaKnown RBP26.05■■□□□ 1.76
GABARAP-201ENST00000302386 AQRO60306 1485 aaKnown RBP eCLIP26.03■■□□□ 1.765e-6■□□□□ 10
GABARAP-201ENST00000302386 EIF4G3O43432 1585 aaKnown RBP26.01■■□□□ 1.75
GABARAP-201ENST00000302386 CHIC1Q5VXU3 224 aa26■■□□□ 1.75
GABARAP-201ENST00000302386 GAPVD1Q14C86 1478 aa25.93■■□□□ 1.74
GABARAP-201ENST00000302386 ABCA5Q8WWZ7 1642 aa25.92■■□□□ 1.74
GABARAP-201ENST00000302386 GRIN2BQ13224 1484 aa25.87■■□□□ 1.73
GABARAP-201ENST00000302386 KIF27Q86VH2 1401 aa25.85■■□□□ 1.73
GABARAP-201ENST00000302386 PBRM1Q86U86 1689 aa25.82■■□□□ 1.72
GABARAP-201ENST00000302386 SNAPC4Q5SXM2 1469 aa25.77■■□□□ 1.72
GABARAP-201ENST00000302386 ERICH3Q5RHP9 1530 aa25.77■■□□□ 1.72
GABARAP-201ENST00000302386 MAGI1Q96QZ7 1491 aaPredicted RBP25.76■■□□□ 1.71
GABARAP-201ENST00000302386 RUSC2Q8N2Y8 1516 aa25.73■■□□□ 1.71
GABARAP-201ENST00000302386 IGF1RP08069 1367 aa25.72■■□□□ 1.71
GABARAP-201ENST00000302386 FBLN2P98095 1184 aa25.66■■□□□ 1.7
GABARAP-201ENST00000302386 SYNJ2O15056 1496 aa25.66■■□□□ 1.7
GABARAP-201ENST00000302386 CHMP7Q8WUX9 453 aaPredicted RBP25.65■■□□□ 1.7
GABARAP-201ENST00000302386 FHAD1B1AJZ9 1412 aa25.64■■□□□ 1.69
GABARAP-201ENST00000302386 ADAMTS12P58397 1594 aa25.64■■□□□ 1.69
GABARAP-201ENST00000302386 CHD1O14646 1710 aa25.62■■□□□ 1.69
GABARAP-201ENST00000302386 EEA1Q15075 1411 aa25.59■■□□□ 1.69
GABARAP-201ENST00000302386 CUL7Q14999 1698 aa25.59■■□□□ 1.69
GABARAP-201ENST00000302386 OSCARQ8IYS5 282 aa25.57■■□□□ 1.68
GABARAP-201ENST00000302386 CARMIL1Q5VZK9 1371 aa25.57■■□□□ 1.68
GABARAP-201ENST00000302386 GRIN2AQ12879 1464 aa25.54■■□□□ 1.68
GABARAP-201ENST00000302386 CSRNP3Q8WYN3 585 aa25.53■■□□□ 1.68
GABARAP-201ENST00000302386 FAM9AQ8IZU1 332 aaPredicted RBP25.52■■□□□ 1.68
GABARAP-201ENST00000302386 PRXQ9BXM0 1461 aa25.44■■□□□ 1.66
GABARAP-201ENST00000302386 RAPGEF2Q9Y4G8 1499 aa25.44■■□□□ 1.66
GABARAP-201ENST00000302386 NUP160Q12769 1436 aa25.41■■□□□ 1.66
GABARAP-201ENST00000302386 CEP170Q5SW79 1584 aa25.38■■□□□ 1.65
GABARAP-201ENST00000302386 DNAJC5Q9H3Z4 198 aa25.37■■□□□ 1.65
GABARAP-201ENST00000302386 CLASP1Q7Z460 1538 aa25.34■■□□□ 1.65
GABARAP-201ENST00000302386 KIF21BO75037 1637 aa25.28■■□□□ 1.64
GABARAP-201ENST00000302386 KIAA0586Q9BVV6 1533 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms