RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 NISCHQ9Y2I1 1504 aa31.66■■■□□ 2.66
CDH16-201ENST00000299752 CCDC180Q9P1Z9 1646 aa27.41■■□□□ 1.98
CDH16-201ENST00000299752 DCAF8L2P0C7V8 631 aa26.69■■□□□ 1.86
CDH16-201ENST00000299752 ZCCHC6Q5VYS8 1495 aaKnown RBP26.56■■□□□ 1.84
CDH16-201ENST00000299752 ABCC9O60706 1549 aa26.38■■□□□ 1.81
CDH16-201ENST00000299752 SHROOM4Q9ULL8 1493 aa26.33■■□□□ 1.81
CDH16-201ENST00000299752 DCAF1Q9Y4B6 1507 aa25.93■■□□□ 1.74
CDH16-201ENST00000299752 NACADO15069 1562 aa25.59■■□□□ 1.69
CDH16-201ENST00000299752 SCRIBQ14160 1630 aa25.58■■□□□ 1.69
CDH16-201ENST00000299752 MYO15BQ96JP2 1530 aa25.56■■□□□ 1.68
CDH16-201ENST00000299752 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
CDH16-201ENST00000299752 SUPT5HO00267 1087 aaKnown RBP25.31■■□□□ 1.64
CDH16-201ENST00000299752 UNC13AQ9UPW8 1703 aa25.03■■□□□ 1.6
CDH16-201ENST00000299752 PABPN1Q86U42 306 aaKnown RBP eCLIP25.02■■□□□ 1.6
CDH16-201ENST00000299752 CECR2Q9BXF3 1484 aa24.8■■□□□ 1.56
CDH16-201ENST00000299752 BICRAQ9NZM4 1560 aa24.75■■□□□ 1.55
CDH16-201ENST00000299752 RSF1Q96T23 1441 aaPredicted RBP24.64■■□□□ 1.54
CDH16-201ENST00000299752 MROH2BQ7Z745 1585 aa24.59■■□□□ 1.53
CDH16-201ENST00000299752 WIZO95785 1651 aa24.42■■□□□ 1.5
CDH16-201ENST00000299752 BAZ1AQ9NRL2 1556 aaPredicted RBP24.4■■□□□ 1.5
CDH16-201ENST00000299752 SMARCA4P51532 1647 aa24.35■■□□□ 1.49
CDH16-201ENST00000299752 CHIC1Q5VXU3 224 aa24.09■■□□□ 1.45
CDH16-201ENST00000299752 EIF4G1Q04637 1599 aaKnown RBP24.02■■□□□ 1.44
CDH16-201ENST00000299752 TOP2AP11388 1531 aaKnown RBP23.98■■□□□ 1.43
CDH16-201ENST00000299752 ATAD2BQ9ULI0 1458 aa23.98■■□□□ 1.43
CDH16-201ENST00000299752 PEG3Q9GZU2 1588 aa23.88■■□□□ 1.41
CDH16-201ENST00000299752 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
CDH16-201ENST00000299752 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
CDH16-201ENST00000299752 SMARCA2P51531 1590 aa23.86■■□□□ 1.41
CDH16-201ENST00000299752 CC2D2AQ9P2K1 1620 aa23.72■■□□□ 1.39
CDH16-201ENST00000299752 NCAPD3P42695 1498 aa23.67■■□□□ 1.38
CDH16-201ENST00000299752 TRIM41Q8WV44 630 aa23.62■■□□□ 1.37
CDH16-201ENST00000299752 HMGXB3Q12766 1538 aa23.58■■□□□ 1.37
CDH16-201ENST00000299752 ABCC8Q09428 1581 aa23.51■■□□□ 1.35
CDH16-201ENST00000299752 DNAJC5BQ9UF47 199 aa23.47■■□□□ 1.35
CDH16-201ENST00000299752 FAM9AQ8IZU1 332 aaPredicted RBP23.46■■□□□ 1.35
CDH16-201ENST00000299752 EHMT2Q96KQ7 1210 aa23.34■■□□□ 1.33
CDH16-201ENST00000299752 LOC105371045A0A1W2PR82 267 aa23.32■■□□□ 1.32
CDH16-201ENST00000299752 WRNQ14191 1432 aaPredicted RBP eCLIP23.2■■□□□ 1.3
CDH16-201ENST00000299752 CFTRP13569 1480 aa23.19■■□□□ 1.3
CDH16-201ENST00000299752 NESP48681 1621 aa23.17■■□□□ 1.3
CDH16-201ENST00000299752 CADPSQ9ULU8 1353 aa23.16■■□□□ 1.3
CDH16-201ENST00000299752 SYNJ1O43426 1573 aa23.14■■□□□ 1.29
CDH16-201ENST00000299752 SOGA1O94964 1423 aa23.05■■□□□ 1.28
CDH16-201ENST00000299752 RUSC2Q8N2Y8 1516 aa23.01■■□□□ 1.27
CDH16-201ENST00000299752 CUX1P39880 1505 aa22.96■■□□□ 1.27
CDH16-201ENST00000299752 PRDM2Q13029 1718 aa22.96■■□□□ 1.27
CDH16-201ENST00000299752 FANCD2Q9BXW9 1451 aa22.95■■□□□ 1.27
CDH16-201ENST00000299752 TOP2BQ02880 1626 aa22.91■■□□□ 1.26
CDH16-201ENST00000299752 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
CDH16-201ENST00000299752 BIVM-ERCC5R4GMW8 1640 aa22.84■■□□□ 1.25
CDH16-201ENST00000299752 CSRNP3Q8WYN3 585 aa22.81■■□□□ 1.24
CDH16-201ENST00000299752 CEP164Q9UPV0 1460 aa22.78■■□□□ 1.24
CDH16-201ENST00000299752 KIF21AQ7Z4S6 1674 aa22.75■■□□□ 1.23
CDH16-201ENST00000299752 PDS5BQ9NTI5 1447 aa22.75■■□□□ 1.23
CDH16-201ENST00000299752 FGD5Q6ZNL6 1462 aa22.73■■□□□ 1.23
CDH16-201ENST00000299752 EEA1Q15075 1411 aa22.72■■□□□ 1.23
CDH16-201ENST00000299752 URB2Q14146 1524 aaKnown RBP22.68■■□□□ 1.22
CDH16-201ENST00000299752 TOPBP1Q92547 1522 aa22.68■■□□□ 1.22
CDH16-201ENST00000299752 UBTFP17480 764 aaKnown RBP22.68■■□□□ 1.22
CDH16-201ENST00000299752 RAD54L2Q9Y4B4 1467 aa22.65■■□□□ 1.22
CDH16-201ENST00000299752 DNMBPQ6XZF7 1577 aa22.64■■□□□ 1.22
CDH16-201ENST00000299752 CUX2O14529 1486 aa22.62■■□□□ 1.21
CDH16-201ENST00000299752 RANGAP1P46060 587 aaPredicted RBP22.6■■□□□ 1.21
CDH16-201ENST00000299752 POLA1P09884 1462 aaPredicted RBP22.59■■□□□ 1.21
CDH16-201ENST00000299752 KIF27Q86VH2 1401 aa22.57■■□□□ 1.2
CDH16-201ENST00000299752 ERCC6Q03468 1493 aa22.55■■□□□ 1.2
CDH16-201ENST00000299752 RAPGEF2Q9Y4G8 1499 aa22.54■■□□□ 1.2
CDH16-201ENST00000299752 GOLGA3Q08378 1498 aa22.51■■□□□ 1.19
CDH16-201ENST00000299752 PCGF6Q9BYE7 350 aa22.47■■□□□ 1.19
CDH16-201ENST00000299752 TDRD9Q8NDG6 1382 aaKnown RBP22.47■■□□□ 1.19
CDH16-201ENST00000299752 TNIKQ9UKE5 1360 aa22.47■■□□□ 1.19
CDH16-201ENST00000299752 MRC2Q9UBG0 1479 aa22.46■■□□□ 1.19
CDH16-201ENST00000299752 KIF21BO75037 1637 aa22.44■■□□□ 1.18
CDH16-201ENST00000299752 IGF1RP08069 1367 aa22.43■■□□□ 1.18
CDH16-201ENST00000299752 CEP162Q5TB80 1403 aa22.42■■□□□ 1.18
CDH16-201ENST00000299752 PPARGC1BQ86YN6 1023 aaKnown RBP22.41■■□□□ 1.18
CDH16-201ENST00000299752 ABCA10Q8WWZ4 1543 aa22.4■■□□□ 1.18
CDH16-201ENST00000299752 PRXQ9BXM0 1461 aa22.38■■□□□ 1.17
CDH16-201ENST00000299752 CARMIL1Q5VZK9 1371 aa22.33■■□□□ 1.17
CDH16-201ENST00000299752 TRIM26Q12899 539 aaPredicted RBP22.3■■□□□ 1.16
CDH16-201ENST00000299752 AQRO60306 1485 aaKnown RBP eCLIP22.29■■□□□ 1.16
CDH16-201ENST00000299752 WDR97A6NE52 1622 aa22.29■■□□□ 1.16
CDH16-201ENST00000299752 WDR62O43379 1518 aa22.29■■□□□ 1.16
CDH16-201ENST00000299752 TARBP1Q13395 1621 aaKnown RBP22.29■■□□□ 1.16
CDH16-201ENST00000299752 TTBK1Q5TCY1 1321 aaPredicted RBP22.29■■□□□ 1.16
CDH16-201ENST00000299752 THOC2Q8NI27 1593 aaKnown RBP22.27■■□□□ 1.16
CDH16-201ENST00000299752 GAPVD1Q14C86 1478 aa22.27■■□□□ 1.16
CDH16-201ENST00000299752 ERICH3Q5RHP9 1530 aa22.25■■□□□ 1.15
CDH16-201ENST00000299752 ZNF608Q9ULD9 1512 aaPredicted RBP22.25■■□□□ 1.15
CDH16-201ENST00000299752 CLIP1P30622 1438 aa22.24■■□□□ 1.15
CDH16-201ENST00000299752 ABCA5Q8WWZ7 1642 aa22.21■■□□□ 1.15
CDH16-201ENST00000299752 IFT140Q96RY7 1462 aa22.16■■□□□ 1.14
CDH16-201ENST00000299752 P3H3Q8IVL6 736 aa22.11■■□□□ 1.13
CDH16-201ENST00000299752 PBRM1Q86U86 1689 aa22.09■■□□□ 1.13
CDH16-201ENST00000299752 CUL7Q14999 1698 aa22.09■■□□□ 1.13
CDH16-201ENST00000299752 EIF4G3O43432 1585 aaKnown RBP22.05■■□□□ 1.12
CDH16-201ENST00000299752 GRIN2BQ13224 1484 aa22.04■■□□□ 1.12
CDH16-201ENST00000299752 FBLN2P98095 1184 aa22.03■■□□□ 1.12
CDH16-201ENST00000299752 ARAP1Q96P48 1450 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms