RNA–Protein interactions for RNA: ENST00000297579.9

DCAF13-201, Transcript of DDB1 and CUL4 associated factor 13, humanhuman

TSL 1 (best) BASIC

Gene DCAF13, Length 2,642 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF13-201ENST00000297579 NISCHQ9Y2I1 1504 aa31.14■■■□□ 2.58
DCAF13-201ENST00000297579 CCDC180Q9P1Z9 1646 aa27.44■■□□□ 1.98
DCAF13-201ENST00000297579 ABCC9O60706 1549 aa26.3■■□□□ 1.8
DCAF13-201ENST00000297579 ZCCHC6Q5VYS8 1495 aaKnown RBP26.07■■□□□ 1.76
DCAF13-201ENST00000297579 DCAF8L2P0C7V8 631 aa25.83■■□□□ 1.72
DCAF13-201ENST00000297579 DCAF1Q9Y4B6 1507 aa25.73■■□□□ 1.71
DCAF13-201ENST00000297579 NACADO15069 1562 aa25.6■■□□□ 1.69
DCAF13-201ENST00000297579 MYO15BQ96JP2 1530 aa25.58■■□□□ 1.69
DCAF13-201ENST00000297579 RB1CC1Q8TDY2 1594 aa25.51■■□□□ 1.67
DCAF13-201ENST00000297579 SCRIBQ14160 1630 aa25.17■■□□□ 1.62
DCAF13-201ENST00000297579 UNC13AQ9UPW8 1703 aa25.1■■□□□ 1.61
DCAF13-201ENST00000297579 SHROOM4Q9ULL8 1493 aa25.09■■□□□ 1.61
DCAF13-201ENST00000297579 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
DCAF13-201ENST00000297579 PABPN1Q86U42 306 aaKnown RBP eCLIP24.67■■□□□ 1.54
DCAF13-201ENST00000297579 CECR2Q9BXF3 1484 aa24.23■■□□□ 1.47
DCAF13-201ENST00000297579 BAZ1AQ9NRL2 1556 aaPredicted RBP24.09■■□□□ 1.45
DCAF13-201ENST00000297579 SMARCA4P51532 1647 aa24.08■■□□□ 1.45
DCAF13-201ENST00000297579 MROH2BQ7Z745 1585 aa24.05■■□□□ 1.44
DCAF13-201ENST00000297579 EIF4G1Q04637 1599 aaKnown RBP24.05■■□□□ 1.44
DCAF13-201ENST00000297579 RSF1Q96T23 1441 aaPredicted RBP23.95■■□□□ 1.43
DCAF13-201ENST00000297579 WIZO95785 1651 aa23.88■■□□□ 1.41
DCAF13-201ENST00000297579 SUPT5HO00267 1087 aaKnown RBP23.87■■□□□ 1.41
DCAF13-201ENST00000297579 CC2D2AQ9P2K1 1620 aa23.83■■□□□ 1.4
DCAF13-201ENST00000297579 PEG3Q9GZU2 1588 aa23.77■■□□□ 1.4
DCAF13-201ENST00000297579 ATAD2BQ9ULI0 1458 aa23.74■■□□□ 1.39
DCAF13-201ENST00000297579 SMARCA2P51531 1590 aa23.74■■□□□ 1.39
DCAF13-201ENST00000297579 BAZ1BQ9UIG0 1483 aaKnown RBP23.6■■□□□ 1.37
DCAF13-201ENST00000297579 NCAPD3P42695 1498 aa23.59■■□□□ 1.37
DCAF13-201ENST00000297579 TOP2AP11388 1531 aaKnown RBP23.59■■□□□ 1.37
DCAF13-201ENST00000297579 HMGXB3Q12766 1538 aa23.57■■□□□ 1.36
DCAF13-201ENST00000297579 DNAJC5BQ9UF47 199 aa23.56■■□□□ 1.36
DCAF13-201ENST00000297579 CCDC88BA6NC98 1476 aa23.31■■□□□ 1.32
DCAF13-201ENST00000297579 PRDM2Q13029 1718 aa22.97■■□□□ 1.27
DCAF13-201ENST00000297579 NESP48681 1621 aa22.96■■□□□ 1.27
DCAF13-201ENST00000297579 CFTRP13569 1480 aa22.95■■□□□ 1.27
DCAF13-201ENST00000297579 CADPSQ9ULU8 1353 aa22.95■■□□□ 1.26
DCAF13-201ENST00000297579 LAMC3Q9Y6N6 1575 aa22.92■■□□□ 1.26
DCAF13-201ENST00000297579 KIF21AQ7Z4S6 1674 aa22.76■■□□□ 1.23
DCAF13-201ENST00000297579 FANCD2Q9BXW9 1451 aa22.74■■□□□ 1.23
DCAF13-201ENST00000297579 ABCC8Q09428 1581 aa22.72■■□□□ 1.23
DCAF13-201ENST00000297579 PDS5BQ9NTI5 1447 aa22.71■■□□□ 1.23
DCAF13-201ENST00000297579 CEP164Q9UPV0 1460 aa22.65■■□□□ 1.22
DCAF13-201ENST00000297579 ERCC6Q03468 1493 aa22.6■■□□□ 1.21
DCAF13-201ENST00000297579 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.21
DCAF13-201ENST00000297579 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
DCAF13-201ENST00000297579 SYNJ1O43426 1573 aa22.55■■□□□ 1.2
DCAF13-201ENST00000297579 CUX1P39880 1505 aa22.53■■□□□ 1.2
DCAF13-201ENST00000297579 BIVM-ERCC5R4GMW8 1640 aa22.5■■□□□ 1.19
DCAF13-201ENST00000297579 URB2Q14146 1524 aaKnown RBP22.49■■□□□ 1.19
DCAF13-201ENST00000297579 TOP2BQ02880 1626 aa22.48■■□□□ 1.19
DCAF13-201ENST00000297579 DNMBPQ6XZF7 1577 aa22.48■■□□□ 1.19
DCAF13-201ENST00000297579 MRC2Q9UBG0 1479 aa22.48■■□□□ 1.19
DCAF13-201ENST00000297579 THOC2Q8NI27 1593 aaKnown RBP22.47■■□□□ 1.19
DCAF13-201ENST00000297579 TRIM41Q8WV44 630 aa22.46■■□□□ 1.19
DCAF13-201ENST00000297579 TOPBP1Q92547 1522 aa22.45■■□□□ 1.18
DCAF13-201ENST00000297579 WDR62O43379 1518 aa22.4■■□□□ 1.18
DCAF13-201ENST00000297579 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
DCAF13-201ENST00000297579 POLA1P09884 1462 aaPredicted RBP22.3■■□□□ 1.16
DCAF13-201ENST00000297579 RAD54L2Q9Y4B4 1467 aa22.22■■□□□ 1.15
DCAF13-201ENST00000297579 CUX2O14529 1486 aa22.2■■□□□ 1.14
DCAF13-201ENST00000297579 SOGA1O94964 1423 aa22.19■■□□□ 1.14
DCAF13-201ENST00000297579 WDR97A6NE52 1622 aa22.18■■□□□ 1.14
DCAF13-201ENST00000297579 TARBP1Q13395 1621 aaKnown RBP22.18■■□□□ 1.14
DCAF13-201ENST00000297579 ABCA10Q8WWZ4 1543 aa22.12■■□□□ 1.13
DCAF13-201ENST00000297579 IFT140Q96RY7 1462 aa22.11■■□□□ 1.13
DCAF13-201ENST00000297579 RUSC2Q8N2Y8 1516 aa22.11■■□□□ 1.13
DCAF13-201ENST00000297579 FAM9AQ8IZU1 332 aaPredicted RBP22.07■■□□□ 1.12
DCAF13-201ENST00000297579 ZNF608Q9ULD9 1512 aaPredicted RBP22.03■■□□□ 1.12
DCAF13-201ENST00000297579 ABCA5Q8WWZ7 1642 aa22.03■■□□□ 1.12
DCAF13-201ENST00000297579 KIF27Q86VH2 1401 aa22.03■■□□□ 1.12
DCAF13-201ENST00000297579 TDRD9Q8NDG6 1382 aaKnown RBP22.02■■□□□ 1.12
DCAF13-201ENST00000297579 EIF4G3O43432 1585 aaKnown RBP22■■□□□ 1.11
DCAF13-201ENST00000297579 PBRM1Q86U86 1689 aa21.98■■□□□ 1.11
DCAF13-201ENST00000297579 EEA1Q15075 1411 aa21.97■■□□□ 1.11
DCAF13-201ENST00000297579 AQRO60306 1485 aaKnown RBP eCLIP21.97■■□□□ 1.118e-7■■■■■ 28.7
DCAF13-201ENST00000297579 GAPVD1Q14C86 1478 aa21.96■■□□□ 1.11
DCAF13-201ENST00000297579 HRCP23327 699 aa21.93■■□□□ 1.1
DCAF13-201ENST00000297579 CSRNP3Q8WYN3 585 aa21.88■■□□□ 1.09
DCAF13-201ENST00000297579 ERICH3Q5RHP9 1530 aa21.86■■□□□ 1.09
DCAF13-201ENST00000297579 IGF1RP08069 1367 aa21.86■■□□□ 1.09
DCAF13-201ENST00000297579 GRIN2BQ13224 1484 aa21.85■■□□□ 1.09
DCAF13-201ENST00000297579 CUL7Q14999 1698 aa21.83■■□□□ 1.08
DCAF13-201ENST00000297579 EHMT2Q96KQ7 1210 aa21.8■■□□□ 1.08
DCAF13-201ENST00000297579 SNAPC4Q5SXM2 1469 aa21.79■■□□□ 1.08
DCAF13-201ENST00000297579 KIF21BO75037 1637 aa21.79■■□□□ 1.08
DCAF13-201ENST00000297579 ADAMTS12P58397 1594 aa21.78■■□□□ 1.08
DCAF13-201ENST00000297579 PRXQ9BXM0 1461 aa21.77■■□□□ 1.07
DCAF13-201ENST00000297579 CARMIL1Q5VZK9 1371 aa21.75■■□□□ 1.07
DCAF13-201ENST00000297579 MAGI1Q96QZ7 1491 aaPredicted RBP21.73■■□□□ 1.07
DCAF13-201ENST00000297579 RAPGEF2Q9Y4G8 1499 aa21.73■■□□□ 1.07
DCAF13-201ENST00000297579 LOC105371045A0A1W2PR82 267 aa21.72■■□□□ 1.07
DCAF13-201ENST00000297579 FHAD1B1AJZ9 1412 aa21.69■■□□□ 1.06
DCAF13-201ENST00000297579 GOLGA3Q08378 1498 aa21.69■■□□□ 1.06
DCAF13-201ENST00000297579 CHD1O14646 1710 aa21.66■■□□□ 1.06
DCAF13-201ENST00000297579 SYNJ2O15056 1496 aa21.64■■□□□ 1.06
DCAF13-201ENST00000297579 PELP1Q8IZL8 1130 aaKnown RBP21.6■■□□□ 1.05
DCAF13-201ENST00000297579 GRIN2AQ12879 1464 aa21.6■■□□□ 1.05
DCAF13-201ENST00000297579 FBLN2P98095 1184 aa21.59■■□□□ 1.05
DCAF13-201ENST00000297579 UBTFP17480 764 aaKnown RBP21.59■■□□□ 1.05
DCAF13-201ENST00000297579 CHMP7Q8WUX9 453 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms