RNA–Protein interactions for RNA: ENST00000296674.12

RPS23-201, Transcript of ribosomal protein S23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS23, Length 3,437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS23-201ENST00000296674 NISCHQ9Y2I1 1504 aa29.89■■■□□ 2.38
RPS23-201ENST00000296674 SUPT5HO00267 1087 aaKnown RBP26.14■■□□□ 1.78
RPS23-201ENST00000296674 SHROOM4Q9ULL8 1493 aa26.12■■□□□ 1.77
RPS23-201ENST00000296674 PPARGC1BQ86YN6 1023 aaKnown RBP26.03■■□□□ 1.76
RPS23-201ENST00000296674 CCDC180Q9P1Z9 1646 aa25.98■■□□□ 1.75
RPS23-201ENST00000296674 PCGF6Q9BYE7 350 aa25.92■■□□□ 1.74
RPS23-201ENST00000296674 HRCP23327 699 aa25.78■■□□□ 1.72
RPS23-201ENST00000296674 ZCCHC6Q5VYS8 1495 aaKnown RBP25.1■■□□□ 1.61
RPS23-201ENST00000296674 DCAF8L2P0C7V8 631 aa25.05■■□□□ 1.6
RPS23-201ENST00000296674 LOC105371045A0A1W2PR82 267 aa24.98■■□□□ 1.59
RPS23-201ENST00000296674 EHMT2Q96KQ7 1210 aa24.97■■□□□ 1.59
RPS23-201ENST00000296674 CHIC1Q5VXU3 224 aa24.92■■□□□ 1.58
RPS23-201ENST00000296674 MYO15BQ96JP2 1530 aa24.9■■□□□ 1.58
RPS23-201ENST00000296674 SCAF1Q9H7N4 1312 aaKnown RBP24.7■■□□□ 1.54
RPS23-201ENST00000296674 ABCC9O60706 1549 aa24.67■■□□□ 1.54
RPS23-201ENST00000296674 PELP1Q8IZL8 1130 aaKnown RBP24.67■■□□□ 1.54
RPS23-201ENST00000296674 DCAF1Q9Y4B6 1507 aa24.67■■□□□ 1.54
RPS23-201ENST00000296674 FAM9AQ8IZU1 332 aaPredicted RBP24.46■■□□□ 1.51
RPS23-201ENST00000296674 TRIM26Q12899 539 aaPredicted RBP24.39■■□□□ 1.49
RPS23-201ENST00000296674 TTBK1Q5TCY1 1321 aaPredicted RBP24.25■■□□□ 1.47
RPS23-201ENST00000296674 NACADO15069 1562 aa24.24■■□□□ 1.47
RPS23-201ENST00000296674 GTF3C3Q9Y5Q9 886 aa24.12■■□□□ 1.45
RPS23-201ENST00000296674 NEUROD1Q13562 356 aa24.11■■□□□ 1.45
RPS23-201ENST00000296674 YTHDC1Q96MU7 727 aaKnown RBP24.09■■□□□ 1.45
RPS23-201ENST00000296674 RB1CC1Q8TDY2 1594 aa24.04■■□□□ 1.44
RPS23-201ENST00000296674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.01■■□□□ 1.43
RPS23-201ENST00000296674 ZEB1P37275 1124 aaPredicted RBP23.98■■□□□ 1.43
RPS23-201ENST00000296674 SCRIBQ14160 1630 aa23.98■■□□□ 1.43
RPS23-201ENST00000296674 ACIN1Q9UKV3 1341 aaKnown RBP23.93■■□□□ 1.42
RPS23-201ENST00000296674 CCER1Q8TC90 406 aaPredicted RBP23.9■■□□□ 1.42
RPS23-201ENST00000296674 CENPBP07199 599 aaPredicted RBP23.75■■□□□ 1.39
RPS23-201ENST00000296674 TRIM41Q8WV44 630 aa23.72■■□□□ 1.39
RPS23-201ENST00000296674 DIEXFQ68CQ4 756 aaKnown RBP23.7■■□□□ 1.38
RPS23-201ENST00000296674 RSF1Q96T23 1441 aaPredicted RBP23.59■■□□□ 1.37
RPS23-201ENST00000296674 MYT1Q01538 1121 aa23.53■■□□□ 1.36
RPS23-201ENST00000296674 UNC13AQ9UPW8 1703 aa23.48■■□□□ 1.35
RPS23-201ENST00000296674 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
RPS23-201ENST00000296674 PABPN1Q86U42 306 aaKnown RBP eCLIP23.32■■□□□ 1.32
RPS23-201ENST00000296674 BICRAQ9NZM4 1560 aa23.27■■□□□ 1.32
RPS23-201ENST00000296674 MROH2BQ7Z745 1585 aa23.2■■□□□ 1.3
RPS23-201ENST00000296674 MIER1Q8N108 512 aa23.13■■□□□ 1.29
RPS23-201ENST00000296674 WIZO95785 1651 aa23.09■■□□□ 1.29
RPS23-201ENST00000296674 BAZ1AQ9NRL2 1556 aaPredicted RBP23.08■■□□□ 1.29
RPS23-201ENST00000296674 HNRNPUL2Q1KMD3 747 aaKnown RBP23.05■■□□□ 1.28
RPS23-201ENST00000296674 RANGAP1P46060 587 aaPredicted RBP23.04■■□□□ 1.28
RPS23-201ENST00000296674 BCANQ96GW7 911 aa23■■□□□ 1.27
RPS23-201ENST00000296674 ZNF316A6NFI3 1004 aaPredicted RBP22.99■■□□□ 1.27
RPS23-201ENST00000296674 SMARCA4P51532 1647 aa22.95■■□□□ 1.26
RPS23-201ENST00000296674 BCL11AQ9H165 835 aa22.79■■□□□ 1.24
RPS23-201ENST00000296674 UBTFP17480 764 aaKnown RBP22.78■■□□□ 1.24
RPS23-201ENST00000296674 ABCC8Q09428 1581 aa22.69■■□□□ 1.22
RPS23-201ENST00000296674 TOP2AP11388 1531 aaKnown RBP22.66■■□□□ 1.22
RPS23-201ENST00000296674 EIF4G1Q04637 1599 aaKnown RBP22.65■■□□□ 1.22
RPS23-201ENST00000296674 PEG3Q9GZU2 1588 aa22.63■■□□□ 1.21
RPS23-201ENST00000296674 CSRNP3Q8WYN3 585 aa22.63■■□□□ 1.21
RPS23-201ENST00000296674 SUPT16HQ9Y5B9 1047 aaKnown RBP22.63■■□□□ 1.21
RPS23-201ENST00000296674 CCDC88BA6NC98 1476 aa22.6■■□□□ 1.21
RPS23-201ENST00000296674 ATAD2BQ9ULI0 1458 aa22.6■■□□□ 1.21
RPS23-201ENST00000296674 SMARCA2P51531 1590 aa22.58■■□□□ 1.21
RPS23-201ENST00000296674 ANP32EQ9BTT0 268 aa22.57■■□□□ 1.2
RPS23-201ENST00000296674 TSHZ2Q9NRE2 1034 aa22.54■■□□□ 1.2
RPS23-201ENST00000296674 BAZ1BQ9UIG0 1483 aaKnown RBP22.5■■□□□ 1.19
RPS23-201ENST00000296674 SOGA1O94964 1423 aa22.49■■□□□ 1.19
RPS23-201ENST00000296674 ITGAEP38570 1179 aa22.49■■□□□ 1.19
RPS23-201ENST00000296674 RUSC2Q8N2Y8 1516 aa22.44■■□□□ 1.18
RPS23-201ENST00000296674 KCNH8Q96L42 1107 aa22.42■■□□□ 1.18
RPS23-201ENST00000296674 FKBP8Q14318 412 aa22.39■■□□□ 1.17
RPS23-201ENST00000296674 NCAPD3P42695 1498 aa22.39■■□□□ 1.17
RPS23-201ENST00000296674 APLP2Q06481 763 aa22.37■■□□□ 1.17
RPS23-201ENST00000296674 HMGXB3Q12766 1538 aa22.33■■□□□ 1.17
RPS23-201ENST00000296674 CEP162Q5TB80 1403 aa22.29■■□□□ 1.16
RPS23-201ENST00000296674 CC2D2AQ9P2K1 1620 aa22.26■■□□□ 1.15
RPS23-201ENST00000296674 ERICH6Q7L0X2 663 aa22.24■■□□□ 1.15
RPS23-201ENST00000296674 HIRIP3Q9BW71 556 aaPredicted RBP22.21■■□□□ 1.15
RPS23-201ENST00000296674 TRIM52Q96A61 297 aa22.21■■□□□ 1.15
RPS23-201ENST00000296674 IRX6P78412 446 aaPredicted RBP22.18■■□□□ 1.14
RPS23-201ENST00000296674 NEFLP07196 543 aa22.16■■□□□ 1.14
RPS23-201ENST00000296674 TNIKQ9UKE5 1360 aa22.12■■□□□ 1.13
RPS23-201ENST00000296674 WRNQ14191 1432 aaPredicted RBP eCLIP22.11■■□□□ 1.13
RPS23-201ENST00000296674 RBM19Q9Y4C8 960 aaKnown RBP22.09■■□□□ 1.13
RPS23-201ENST00000296674 DDX10Q13206 875 aaKnown RBP22.08■■□□□ 1.12
RPS23-201ENST00000296674 SYNJ1O43426 1573 aa22.07■■□□□ 1.12
RPS23-201ENST00000296674 GOLGA3Q08378 1498 aa21.98■■□□□ 1.11
RPS23-201ENST00000296674 CNGB1Q14028 1251 aaPredicted RBP21.94■■□□□ 1.1
RPS23-201ENST00000296674 EEA1Q15075 1411 aa21.94■■□□□ 1.1
RPS23-201ENST00000296674 CFTRP13569 1480 aa21.91■■□□□ 1.1
RPS23-201ENST00000296674 NBR1Q14596 966 aa21.9■■□□□ 1.1
RPS23-201ENST00000296674 RAPGEF2Q9Y4G8 1499 aa21.88■■□□□ 1.09
RPS23-201ENST00000296674 CADPSQ9ULU8 1353 aa21.86■■□□□ 1.09
RPS23-201ENST00000296674 MSH5O43196 834 aa21.84■■□□□ 1.09
RPS23-201ENST00000296674 CLIP1P30622 1438 aa21.83■■□□□ 1.09
RPS23-201ENST00000296674 CEP164Q9UPV0 1460 aa21.82■■□□□ 1.08
RPS23-201ENST00000296674 SENP3-EIF4A1A0A087X0R7 540 aa21.8■■□□□ 1.08
RPS23-201ENST00000296674 ATP1B4Q9UN42 357 aaPredicted RBP21.78■■□□□ 1.08
RPS23-201ENST00000296674 PRKCSHP14314 528 aaPredicted RBP21.77■■□□□ 1.08
RPS23-201ENST00000296674 DNAJC5BQ9UF47 199 aa21.76■■□□□ 1.07
RPS23-201ENST00000296674 CLSPNQ9HAW4 1339 aa21.75■■□□□ 1.07
RPS23-201ENST00000296674 KIF21BO75037 1637 aa21.75■■□□□ 1.07
RPS23-201ENST00000296674 RTN4Q9NQC3 1192 aaKnown RBP21.74■■□□□ 1.07
RPS23-201ENST00000296674 SIN3AQ96ST3 1273 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms