RNA–Protein interactions for RNA: ENST00000295987.12

SYN1-201, Transcript of synapsin I, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYN1, Length 3,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1-201ENST00000295987 NISCHQ9Y2I1 1504 aa32.44■■■□□ 2.78
SYN1-201ENST00000295987 CCDC180Q9P1Z9 1646 aa29.02■■■□□ 2.24
SYN1-201ENST00000295987 SHROOM4Q9ULL8 1493 aa27.67■■■□□ 2.02
SYN1-201ENST00000295987 ABCC9O60706 1549 aa27.33■■□□□ 1.97
SYN1-201ENST00000295987 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
SYN1-201ENST00000295987 MYO15BQ96JP2 1530 aa27.17■■□□□ 1.94
SYN1-201ENST00000295987 ZCCHC6Q5VYS8 1495 aaKnown RBP27.17■■□□□ 1.94
SYN1-201ENST00000295987 DCAF1Q9Y4B6 1507 aa27.15■■□□□ 1.94
SYN1-201ENST00000295987 DCAF8L2P0C7V8 631 aa27.13■■□□□ 1.93
SYN1-201ENST00000295987 NACADO15069 1562 aa27■■□□□ 1.91
SYN1-201ENST00000295987 RB1CC1Q8TDY2 1594 aa26.86■■□□□ 1.89
SYN1-201ENST00000295987 UNC13AQ9UPW8 1703 aa26.46■■□□□ 1.83
SYN1-201ENST00000295987 BICRAQ9NZM4 1560 aa26.08■■□□□ 1.77
SYN1-201ENST00000295987 SCRIBQ14160 1630 aa26.03■■□□□ 1.76
SYN1-201ENST00000295987 CHIC1Q5VXU3 224 aa25.96■■□□□ 1.75
SYN1-201ENST00000295987 PCGF6Q9BYE7 350 aa25.81■■□□□ 1.72
SYN1-201ENST00000295987 LOC105371045A0A1W2PR82 267 aa25.7■■□□□ 1.7
SYN1-201ENST00000295987 EHMT2Q96KQ7 1210 aa25.66■■□□□ 1.7
SYN1-201ENST00000295987 PPARGC1BQ86YN6 1023 aaKnown RBP25.48■■□□□ 1.67
SYN1-201ENST00000295987 FAM9AQ8IZU1 332 aaPredicted RBP25.39■■□□□ 1.66
SYN1-201ENST00000295987 HRCP23327 699 aa25.38■■□□□ 1.65
SYN1-201ENST00000295987 PABPN1Q86U42 306 aaKnown RBP eCLIP25.36■■□□□ 1.65
SYN1-201ENST00000295987 EIF4G1Q04637 1599 aaKnown RBP25.26■■□□□ 1.63
SYN1-201ENST00000295987 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
SYN1-201ENST00000295987 BAZ1AQ9NRL2 1556 aaPredicted RBP25.14■■□□□ 1.62
SYN1-201ENST00000295987 PEG3Q9GZU2 1588 aa25.1■■□□□ 1.61
SYN1-201ENST00000295987 CC2D2AQ9P2K1 1620 aa25.04■■□□□ 1.6
SYN1-201ENST00000295987 CECR2Q9BXF3 1484 aa25.01■■□□□ 1.59
SYN1-201ENST00000295987 TRIM41Q8WV44 630 aa25.01■■□□□ 1.59
SYN1-201ENST00000295987 MROH2BQ7Z745 1585 aa24.89■■□□□ 1.58
SYN1-201ENST00000295987 SMARCA2P51531 1590 aa24.89■■□□□ 1.58
SYN1-201ENST00000295987 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
SYN1-201ENST00000295987 NCAPD3P42695 1498 aa24.8■■□□□ 1.56
SYN1-201ENST00000295987 ATAD2BQ9ULI0 1458 aa24.78■■□□□ 1.56
SYN1-201ENST00000295987 TTBK1Q5TCY1 1321 aaPredicted RBP24.75■■□□□ 1.55
SYN1-201ENST00000295987 TRIM26Q12899 539 aaPredicted RBP24.75■■□□□ 1.55
SYN1-201ENST00000295987 RSF1Q96T23 1441 aaPredicted RBP24.72■■□□□ 1.55
SYN1-201ENST00000295987 WIZO95785 1651 aa24.69■■□□□ 1.54
SYN1-201ENST00000295987 DNAJC5BQ9UF47 199 aa24.64■■□□□ 1.53
SYN1-201ENST00000295987 TOP2AP11388 1531 aaKnown RBP24.57■■□□□ 1.52
SYN1-201ENST00000295987 BAZ1BQ9UIG0 1483 aaKnown RBP24.54■■□□□ 1.52
SYN1-201ENST00000295987 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
SYN1-201ENST00000295987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.26■■□□□ 1.47
SYN1-201ENST00000295987 LAMC3Q9Y6N6 1575 aa24.17■■□□□ 1.46
SYN1-201ENST00000295987 RANGAP1P46060 587 aaPredicted RBP24.12■■□□□ 1.45
SYN1-201ENST00000295987 CCER1Q8TC90 406 aaPredicted RBP24.11■■□□□ 1.45
SYN1-201ENST00000295987 CCDC88BA6NC98 1476 aa24.1■■□□□ 1.45
SYN1-201ENST00000295987 ZEB1P37275 1124 aaPredicted RBP24.04■■□□□ 1.44
SYN1-201ENST00000295987 CFTRP13569 1480 aa24.01■■□□□ 1.43
SYN1-201ENST00000295987 UBTFP17480 764 aaKnown RBP24■■□□□ 1.43
SYN1-201ENST00000295987 CADPSQ9ULU8 1353 aa23.93■■□□□ 1.42
SYN1-201ENST00000295987 KIF21AQ7Z4S6 1674 aa23.86■■□□□ 1.41
SYN1-201ENST00000295987 ABCC8Q09428 1581 aa23.84■■□□□ 1.41
SYN1-201ENST00000295987 NESP48681 1621 aa23.83■■□□□ 1.4
SYN1-201ENST00000295987 THOC2Q8NI27 1593 aaKnown RBP23.76■■□□□ 1.39
SYN1-201ENST00000295987 PDS5BQ9NTI5 1447 aa23.76■■□□□ 1.39
SYN1-201ENST00000295987 SOGA1O94964 1423 aa23.72■■□□□ 1.39
SYN1-201ENST00000295987 SCAF1Q9H7N4 1312 aaKnown RBP23.71■■□□□ 1.39
SYN1-201ENST00000295987 HNRNPUL2Q1KMD3 747 aaKnown RBP23.71■■□□□ 1.39
SYN1-201ENST00000295987 FANCD2Q9BXW9 1451 aa23.66■■□□□ 1.38
SYN1-201ENST00000295987 WDR62O43379 1518 aa23.64■■□□□ 1.37
SYN1-201ENST00000295987 CEP164Q9UPV0 1460 aa23.63■■□□□ 1.37
SYN1-201ENST00000295987 CSRNP3Q8WYN3 585 aa23.62■■□□□ 1.37
SYN1-201ENST00000295987 RUSC2Q8N2Y8 1516 aa23.62■■□□□ 1.37
SYN1-201ENST00000295987 MRC2Q9UBG0 1479 aa23.58■■□□□ 1.36
SYN1-201ENST00000295987 YTHDC1Q96MU7 727 aaKnown RBP23.58■■□□□ 1.36
SYN1-201ENST00000295987 DIEXFQ68CQ4 756 aaKnown RBP23.54■■□□□ 1.36
SYN1-201ENST00000295987 CEP162Q5TB80 1403 aa23.53■■□□□ 1.36
SYN1-201ENST00000295987 ERCC6Q03468 1493 aa23.53■■□□□ 1.36
SYN1-201ENST00000295987 DNMBPQ6XZF7 1577 aa23.52■■□□□ 1.36
SYN1-201ENST00000295987 BIVM-ERCC5R4GMW8 1640 aa23.52■■□□□ 1.36
SYN1-201ENST00000295987 CUX2O14529 1486 aa23.5■■□□□ 1.35
SYN1-201ENST00000295987 URB2Q14146 1524 aaKnown RBP23.47■■□□□ 1.35
SYN1-201ENST00000295987 NEUROD1Q13562 356 aa23.46■■□□□ 1.35
SYN1-201ENST00000295987 TOP2BQ02880 1626 aa23.41■■□□□ 1.34
SYN1-201ENST00000295987 APLP2Q06481 763 aa23.4■■□□□ 1.34
SYN1-201ENST00000295987 TOPBP1Q92547 1522 aa23.4■■□□□ 1.34
SYN1-201ENST00000295987 CUX1P39880 1505 aa23.38■■□□□ 1.33
SYN1-201ENST00000295987 WDR97A6NE52 1622 aa23.36■■□□□ 1.33
SYN1-201ENST00000295987 GTF3C3Q9Y5Q9 886 aa23.31■■□□□ 1.32
SYN1-201ENST00000295987 SYNJ1O43426 1573 aa23.3■■□□□ 1.32
SYN1-201ENST00000295987 TARBP1Q13395 1621 aaKnown RBP23.29■■□□□ 1.32
SYN1-201ENST00000295987 ACIN1Q9UKV3 1341 aaKnown RBP23.29■■□□□ 1.32
SYN1-201ENST00000295987 TNIKQ9UKE5 1360 aa23.27■■□□□ 1.32
SYN1-201ENST00000295987 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
SYN1-201ENST00000295987 ITGAEP38570 1179 aa23.25■■□□□ 1.31
SYN1-201ENST00000295987 POLA1P09884 1462 aaPredicted RBP23.19■■□□□ 1.3
SYN1-201ENST00000295987 IFT140Q96RY7 1462 aa23.19■■□□□ 1.3
SYN1-201ENST00000295987 CENPBP07199 599 aaPredicted RBP23.17■■□□□ 1.3
SYN1-201ENST00000295987 ZNF316A6NFI3 1004 aaPredicted RBP23.16■■□□□ 1.3
SYN1-201ENST00000295987 FGD5Q6ZNL6 1462 aa23.16■■□□□ 1.3
SYN1-201ENST00000295987 GOLGA3Q08378 1498 aa23.12■■□□□ 1.29
SYN1-201ENST00000295987 CLIP1P30622 1438 aa23.11■■□□□ 1.29
SYN1-201ENST00000295987 ABCA10Q8WWZ4 1543 aa23.1■■□□□ 1.29
SYN1-201ENST00000295987 ABCA5Q8WWZ7 1642 aa23.1■■□□□ 1.29
SYN1-201ENST00000295987 MIER1Q8N108 512 aa23.09■■□□□ 1.29
SYN1-201ENST00000295987 EIF4G3O43432 1585 aaKnown RBP23.03■■□□□ 1.28
SYN1-201ENST00000295987 ATP1B4Q9UN42 357 aaPredicted RBP23.03■■□□□ 1.28
SYN1-201ENST00000295987 PBRM1Q86U86 1689 aa23.02■■□□□ 1.28
SYN1-201ENST00000295987 RAPGEF2Q9Y4G8 1499 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 383.4 ms