RNA–Protein interactions for RNA: ENST00000294635.4

LRRC53-201, Transcript of leucine rich repeat containing 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC53, Length 3,859 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53-201ENST00000294635 NISCHQ9Y2I1 1504 aa12.27□□□□□ -0.44
LRRC53-201ENST00000294635 CCDC180Q9P1Z9 1646 aa10.98□□□□□ -0.65
LRRC53-201ENST00000294635 ABCC9O60706 1549 aa10.38□□□□□ -0.75
LRRC53-201ENST00000294635 MYO15BQ96JP2 1530 aa10.32□□□□□ -0.76
LRRC53-201ENST00000294635 DCAF1Q9Y4B6 1507 aa10.29□□□□□ -0.76
LRRC53-201ENST00000294635 ZCCHC6Q5VYS8 1495 aaKnown RBP10.27□□□□□ -0.77
LRRC53-201ENST00000294635 NACADO15069 1562 aa10.25□□□□□ -0.77
LRRC53-201ENST00000294635 RB1CC1Q8TDY2 1594 aa10.21□□□□□ -0.78
LRRC53-201ENST00000294635 UNC13AQ9UPW8 1703 aa9.94□□□□□ -0.82
LRRC53-201ENST00000294635 SHROOM4Q9ULL8 1493 aa9.94□□□□□ -0.82
LRRC53-201ENST00000294635 DCAF8L2P0C7V8 631 aa9.92□□□□□ -0.82
LRRC53-201ENST00000294635 BICRAQ9NZM4 1560 aa9.86□□□□□ -0.83
LRRC53-201ENST00000294635 SCRIBQ14160 1630 aa9.84□□□□□ -0.83
LRRC53-201ENST00000294635 PABPN1Q86U42 306 aaKnown RBP eCLIP9.64□□□□□ -0.87
LRRC53-201ENST00000294635 EIF4G1Q04637 1599 aaKnown RBP9.58□□□□□ -0.88
LRRC53-201ENST00000294635 BAZ1AQ9NRL2 1556 aaPredicted RBP9.53□□□□□ -0.88
LRRC53-201ENST00000294635 SMARCA4P51532 1647 aa9.51□□□□□ -0.89
LRRC53-201ENST00000294635 PEG3Q9GZU2 1588 aa9.5□□□□□ -0.89
LRRC53-201ENST00000294635 CC2D2AQ9P2K1 1620 aa9.49□□□□□ -0.89
LRRC53-201ENST00000294635 SMARCA2P51531 1590 aa9.46□□□□□ -0.9
LRRC53-201ENST00000294635 CECR2Q9BXF3 1484 aa9.45□□□□□ -0.9
LRRC53-201ENST00000294635 HMGXB3Q12766 1538 aa9.43□□□□□ -0.9
LRRC53-201ENST00000294635 NCAPD3P42695 1498 aa9.42□□□□□ -0.9
LRRC53-201ENST00000294635 ATAD2BQ9ULI0 1458 aa9.4□□□□□ -0.9
LRRC53-201ENST00000294635 MROH2BQ7Z745 1585 aa9.4□□□□□ -0.9
LRRC53-201ENST00000294635 DNAJC5BQ9UF47 199 aa9.36□□□□□ -0.91
LRRC53-201ENST00000294635 RSF1Q96T23 1441 aaPredicted RBP9.35□□□□□ -0.91
LRRC53-201ENST00000294635 BAZ1BQ9UIG0 1483 aaKnown RBP9.31□□□□□ -0.92
LRRC53-201ENST00000294635 WIZO95785 1651 aa9.3□□□□□ -0.92
LRRC53-201ENST00000294635 TOP2AP11388 1531 aaKnown RBP9.3□□□□□ -0.92
LRRC53-201ENST00000294635 LAMC3Q9Y6N6 1575 aa9.18□□□□□ -0.94
LRRC53-201ENST00000294635 PRDM2Q13029 1718 aa9.14□□□□□ -0.95
LRRC53-201ENST00000294635 CCDC88BA6NC98 1476 aa9.11□□□□□ -0.95
LRRC53-201ENST00000294635 CFTRP13569 1480 aa9.11□□□□□ -0.95
LRRC53-201ENST00000294635 CADPSQ9ULU8 1353 aa9.1□□□□□ -0.95
LRRC53-201ENST00000294635 PDS5BQ9NTI5 1447 aa9.06□□□□□ -0.96
LRRC53-201ENST00000294635 NESP48681 1621 aa9.02□□□□□ -0.97
LRRC53-201ENST00000294635 KIF21AQ7Z4S6 1674 aa9□□□□□ -0.97
LRRC53-201ENST00000294635 SUPT5HO00267 1087 aaKnown RBP9□□□□□ -0.97
LRRC53-201ENST00000294635 THOC2Q8NI27 1593 aaKnown RBP8.99□□□□□ -0.97
LRRC53-201ENST00000294635 FANCD2Q9BXW9 1451 aa8.98□□□□□ -0.97
LRRC53-201ENST00000294635 CEP164Q9UPV0 1460 aa8.98□□□□□ -0.97
LRRC53-201ENST00000294635 ERCC6Q03468 1493 aa8.98□□□□□ -0.97
LRRC53-201ENST00000294635 CUX2O14529 1486 aa8.97□□□□□ -0.97
LRRC53-201ENST00000294635 MRC2Q9UBG0 1479 aa8.97□□□□□ -0.97
LRRC53-201ENST00000294635 WDR62O43379 1518 aa8.97□□□□□ -0.97
LRRC53-201ENST00000294635 ABCC8Q09428 1581 aa8.97□□□□□ -0.97
LRRC53-201ENST00000294635 DNMBPQ6XZF7 1577 aa8.92□□□□□ -0.98
LRRC53-201ENST00000294635 URB2Q14146 1524 aaKnown RBP8.89□□□□□ -0.99
LRRC53-201ENST00000294635 WDR97A6NE52 1622 aa8.88□□□□□ -0.99
LRRC53-201ENST00000294635 BIVM-ERCC5R4GMW8 1640 aa8.87□□□□□ -0.99
LRRC53-201ENST00000294635 TOPBP1Q92547 1522 aa8.87□□□□□ -0.99
LRRC53-201ENST00000294635 TOP2BQ02880 1626 aa8.84□□□□□ -0.99
LRRC53-201ENST00000294635 CUX1P39880 1505 aa8.83□□□□□ -1
LRRC53-201ENST00000294635 IFT140Q96RY7 1462 aa8.83□□□□□ -1
LRRC53-201ENST00000294635 WRNQ14191 1432 aaPredicted RBP eCLIP8.81□□□□□ -1
LRRC53-201ENST00000294635 TARBP1Q13395 1621 aaKnown RBP8.8□□□□□ -1
LRRC53-201ENST00000294635 POLA1P09884 1462 aaPredicted RBP8.78□□□□□ -1
LRRC53-201ENST00000294635 SYNJ1O43426 1573 aa8.78□□□□□ -1
LRRC53-201ENST00000294635 FGD5Q6ZNL6 1462 aa8.77□□□□□ -1.01
LRRC53-201ENST00000294635 ABCA10Q8WWZ4 1543 aa8.76□□□□□ -1.01
LRRC53-201ENST00000294635 SOGA1O94964 1423 aa8.73□□□□□ -1.01
LRRC53-201ENST00000294635 ABCA5Q8WWZ7 1642 aa8.73□□□□□ -1.01
LRRC53-201ENST00000294635 EIF4G3O43432 1585 aaKnown RBP8.72□□□□□ -1.01
LRRC53-201ENST00000294635 PBRM1Q86U86 1689 aa8.68□□□□□ -1.02
LRRC53-201ENST00000294635 RAD54L2Q9Y4B4 1467 aa8.68□□□□□ -1.02
LRRC53-201ENST00000294635 ERICH3Q5RHP9 1530 aa8.68□□□□□ -1.02
LRRC53-201ENST00000294635 GRIN2BQ13224 1484 aa8.67□□□□□ -1.02
LRRC53-201ENST00000294635 MAGI1Q96QZ7 1491 aaPredicted RBP8.67□□□□□ -1.02
LRRC53-201ENST00000294635 ZNF608Q9ULD9 1512 aaPredicted RBP8.67□□□□□ -1.02
LRRC53-201ENST00000294635 GAPVD1Q14C86 1478 aa8.65□□□□□ -1.02
LRRC53-201ENST00000294635 CUL7Q14999 1698 aa8.64□□□□□ -1.03
LRRC53-201ENST00000294635 KIF27Q86VH2 1401 aa8.63□□□□□ -1.03
LRRC53-201ENST00000294635 EEA1Q15075 1411 aa8.62□□□□□ -1.03
LRRC53-201ENST00000294635 ADAMTS12P58397 1594 aa8.62□□□□□ -1.03
LRRC53-201ENST00000294635 AQRO60306 1485 aaKnown RBP eCLIP8.62□□□□□ -1.03
LRRC53-201ENST00000294635 SYNJ2O15056 1496 aa8.6□□□□□ -1.03
LRRC53-201ENST00000294635 TDRD9Q8NDG6 1382 aaKnown RBP8.6□□□□□ -1.03
LRRC53-201ENST00000294635 FHAD1B1AJZ9 1412 aa8.59□□□□□ -1.03
LRRC53-201ENST00000294635 SNAPC4Q5SXM2 1469 aa8.59□□□□□ -1.03
LRRC53-201ENST00000294635 TRIM41Q8WV44 630 aa8.58□□□□□ -1.04
LRRC53-201ENST00000294635 CHD1O14646 1710 aa8.58□□□□□ -1.04
LRRC53-201ENST00000294635 CHIC1Q5VXU3 224 aa8.56□□□□□ -1.04
LRRC53-201ENST00000294635 IGF1RP08069 1367 aa8.56□□□□□ -1.04
LRRC53-201ENST00000294635 GRIN2AQ12879 1464 aa8.54□□□□□ -1.04
LRRC53-201ENST00000294635 CLASP1Q7Z460 1538 aa8.54□□□□□ -1.04
LRRC53-201ENST00000294635 NUP160Q12769 1436 aa8.53□□□□□ -1.04
LRRC53-201ENST00000294635 PRXQ9BXM0 1461 aa8.52□□□□□ -1.05
LRRC53-201ENST00000294635 KIF21BO75037 1637 aa8.51□□□□□ -1.05
LRRC53-201ENST00000294635 RAPGEF2Q9Y4G8 1499 aa8.5□□□□□ -1.05
LRRC53-201ENST00000294635 CARMIL1Q5VZK9 1371 aa8.5□□□□□ -1.05
LRRC53-201ENST00000294635 SHROOM2Q13796 1616 aa8.5□□□□□ -1.05
LRRC53-201ENST00000294635 OSCARQ8IYS5 282 aa8.49□□□□□ -1.05
LRRC53-201ENST00000294635 CEP170Q5SW79 1584 aa8.49□□□□□ -1.05
LRRC53-201ENST00000294635 RUSC2Q8N2Y8 1516 aa8.49□□□□□ -1.05
LRRC53-201ENST00000294635 CHMP7Q8WUX9 453 aaPredicted RBP8.48□□□□□ -1.05
LRRC53-201ENST00000294635 CTTNBP2Q8WZ74 1663 aa8.47□□□□□ -1.05
LRRC53-201ENST00000294635 KIAA0586Q9BVV6 1533 aa8.47□□□□□ -1.05
LRRC53-201ENST00000294635 CSRNP3Q8WYN3 585 aa8.45□□□□□ -1.06
LRRC53-201ENST00000294635 DNAJC5Q9H3Z4 198 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms