RNA–Protein interactions for RNA: ENST00000287820.10

PPARG-201, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPARG, Length 1,850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-201ENST00000287820 NISCHQ9Y2I1 1504 aa20.47■□□□□ 0.87
PPARG-201ENST00000287820 CCDC180Q9P1Z9 1646 aa18.16■□□□□ 0.5
PPARG-201ENST00000287820 ABCC9O60706 1549 aa17.85■□□□□ 0.45
PPARG-201ENST00000287820 DCAF8L2P0C7V8 631 aa17.2■□□□□ 0.34
PPARG-201ENST00000287820 RB1CC1Q8TDY2 1594 aa17.14■□□□□ 0.33
PPARG-201ENST00000287820 NACADO15069 1562 aa17.13■□□□□ 0.33
PPARG-201ENST00000287820 MYO15BQ96JP2 1530 aa17.03■□□□□ 0.32
PPARG-201ENST00000287820 ZCCHC6Q5VYS8 1495 aaKnown RBP17.02■□□□□ 0.31
PPARG-201ENST00000287820 DCAF1Q9Y4B6 1507 aa16.94■□□□□ 0.3
PPARG-201ENST00000287820 UNC13AQ9UPW8 1703 aa16.75■□□□□ 0.27
PPARG-201ENST00000287820 PABPN1Q86U42 306 aaKnown RBP eCLIP16.73■□□□□ 0.27
PPARG-201ENST00000287820 BICRAQ9NZM4 1560 aa16.64■□□□□ 0.25
PPARG-201ENST00000287820 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
PPARG-201ENST00000287820 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
PPARG-201ENST00000287820 SHROOM4Q9ULL8 1493 aa16.42■□□□□ 0.22
PPARG-201ENST00000287820 EIF4G1Q04637 1599 aaKnown RBP16.19■□□□□ 0.18
PPARG-201ENST00000287820 CC2D2AQ9P2K1 1620 aa16.14■□□□□ 0.17
PPARG-201ENST00000287820 CECR2Q9BXF3 1484 aa16.05■□□□□ 0.16
PPARG-201ENST00000287820 POTEDQ86YR6 584 aa15.9■□□□□ 0.14
PPARG-201ENST00000287820 SMARCA4P51532 1647 aa15.86■□□□□ 0.13
PPARG-201ENST00000287820 BAZ1AQ9NRL2 1556 aaPredicted RBP15.85■□□□□ 0.13
PPARG-201ENST00000287820 NCAPD3P42695 1498 aa15.85■□□□□ 0.13
PPARG-201ENST00000287820 ATAD2BQ9ULI0 1458 aa15.83■□□□□ 0.12
PPARG-201ENST00000287820 MROH2BQ7Z745 1585 aa15.78■□□□□ 0.12
PPARG-201ENST00000287820 SMARCA2P51531 1590 aa15.77■□□□□ 0.12
PPARG-201ENST00000287820 PEG3Q9GZU2 1588 aa15.73■□□□□ 0.11
PPARG-201ENST00000287820 HMGXB3Q12766 1538 aa15.7■□□□□ 0.1
PPARG-201ENST00000287820 BAZ1BQ9UIG0 1483 aaKnown RBP15.66■□□□□ 0.1
PPARG-201ENST00000287820 RSF1Q96T23 1441 aaPredicted RBP15.61■□□□□ 0.09
PPARG-201ENST00000287820 WIZO95785 1651 aa15.59■□□□□ 0.09
PPARG-201ENST00000287820 NESP48681 1621 aa15.45■□□□□ 0.06
PPARG-201ENST00000287820 TOP2AP11388 1531 aaKnown RBP15.4■□□□□ 0.06
PPARG-201ENST00000287820 CADPSQ9ULU8 1353 aa15.39■□□□□ 0.05
PPARG-201ENST00000287820 LAMC3Q9Y6N6 1575 aa15.38■□□□□ 0.05
PPARG-201ENST00000287820 ERCC6Q03468 1493 aa15.37■□□□□ 0.05
PPARG-201ENST00000287820 AEBP2Q6ZN18 517 aaPredicted RBP15.32■□□□□ 0.04
PPARG-201ENST00000287820 PDS5BQ9NTI5 1447 aa15.31■□□□□ 0.04
PPARG-201ENST00000287820 CCDC88BA6NC98 1476 aa15.28■□□□□ 0.04
PPARG-201ENST00000287820 CFTRP13569 1480 aa15.27■□□□□ 0.03
PPARG-201ENST00000287820 CUX2O14529 1486 aa15.23■□□□□ 0.03
PPARG-201ENST00000287820 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
PPARG-201ENST00000287820 SUPT5HO00267 1087 aaKnown RBP15.21■□□□□ 0.03
PPARG-201ENST00000287820 FANCD2Q9BXW9 1451 aa15.17■□□□□ 0.02
PPARG-201ENST00000287820 THOC2Q8NI27 1593 aaKnown RBP15.17■□□□□ 0.02
PPARG-201ENST00000287820 CEP164Q9UPV0 1460 aa15.13■□□□□ 0.01
PPARG-201ENST00000287820 MRC2Q9UBG0 1479 aa15.12■□□□□ 0.01
PPARG-201ENST00000287820 PRDM2Q13029 1718 aa15.07■□□□□ 0
PPARG-201ENST00000287820 WDR62O43379 1518 aa15.06■□□□□ 0
PPARG-201ENST00000287820 URB2Q14146 1524 aaKnown RBP15.02■□□□□ -0
PPARG-201ENST00000287820 ABCC8Q09428 1581 aa14.94□□□□□ -0.02
PPARG-201ENST00000287820 TOPBP1Q92547 1522 aa14.92□□□□□ -0.02
PPARG-201ENST00000287820 DNAJC5Q9H3Z4 198 aa14.92□□□□□ -0.02
PPARG-201ENST00000287820 DNMBPQ6XZF7 1577 aa14.87□□□□□ -0.03
PPARG-201ENST00000287820 IFT140Q96RY7 1462 aa14.83□□□□□ -0.04
PPARG-201ENST00000287820 POLA1P09884 1462 aaPredicted RBP14.79□□□□□ -0.04
PPARG-201ENST00000287820 CUX1P39880 1505 aa14.79□□□□□ -0.04
PPARG-201ENST00000287820 ZNF608Q9ULD9 1512 aaPredicted RBP14.78□□□□□ -0.04
PPARG-201ENST00000287820 SOGA1O94964 1423 aa14.77□□□□□ -0.04
PPARG-201ENST00000287820 TARBP1Q13395 1621 aaKnown RBP14.76□□□□□ -0.05
PPARG-201ENST00000287820 RAD54L2Q9Y4B4 1467 aa14.75□□□□□ -0.05
PPARG-201ENST00000287820 FGD5Q6ZNL6 1462 aa14.74□□□□□ -0.05
PPARG-201ENST00000287820 AQRO60306 1485 aaKnown RBP eCLIP14.72□□□□□ -0.05
PPARG-201ENST00000287820 WRNQ14191 1432 aaPredicted RBP eCLIP14.69□□□□□ -0.06
PPARG-201ENST00000287820 TDRD9Q8NDG6 1382 aaKnown RBP14.69□□□□□ -0.06
PPARG-201ENST00000287820 OSCARQ8IYS5 282 aa14.69□□□□□ -0.06
PPARG-201ENST00000287820 EIF4G3O43432 1585 aaKnown RBP14.66□□□□□ -0.06
PPARG-201ENST00000287820 TOP2BQ02880 1626 aa14.65□□□□□ -0.06
PPARG-201ENST00000287820 SYNJ1O43426 1573 aa14.63□□□□□ -0.07
PPARG-201ENST00000287820 BIVM-ERCC5R4GMW8 1640 aa14.62□□□□□ -0.07
PPARG-201ENST00000287820 ABCA10Q8WWZ4 1543 aa14.61□□□□□ -0.07
PPARG-201ENST00000287820 WDR97A6NE52 1622 aa14.61□□□□□ -0.07
PPARG-201ENST00000287820 GAPVD1Q14C86 1478 aa14.57□□□□□ -0.08
PPARG-201ENST00000287820 GRIN2BQ13224 1484 aa14.57□□□□□ -0.08
PPARG-201ENST00000287820 FBLN2P98095 1184 aa14.56□□□□□ -0.08
PPARG-201ENST00000287820 CHMP7Q8WUX9 453 aaPredicted RBP14.52□□□□□ -0.08
PPARG-201ENST00000287820 SNAPC4Q5SXM2 1469 aa14.52□□□□□ -0.08
PPARG-201ENST00000287820 MAGI1Q96QZ7 1491 aaPredicted RBP14.52□□□□□ -0.09
PPARG-201ENST00000287820 ABCA5Q8WWZ7 1642 aa14.52□□□□□ -0.09
PPARG-201ENST00000287820 CHD1O14646 1710 aa14.5□□□□□ -0.09
PPARG-201ENST00000287820 CHIC1Q5VXU3 224 aa14.49□□□□□ -0.09
PPARG-201ENST00000287820 PBRM1Q86U86 1689 aa14.48□□□□□ -0.09
PPARG-201ENST00000287820 SYNJ2O15056 1496 aa14.47□□□□□ -0.09
PPARG-201ENST00000287820 ERICH3Q5RHP9 1530 aa14.42□□□□□ -0.1
PPARG-201ENST00000287820 IGF1RP08069 1367 aa14.4□□□□□ -0.1
PPARG-201ENST00000287820 FHAD1B1AJZ9 1412 aa14.4□□□□□ -0.1
PPARG-201ENST00000287820 KIF27Q86VH2 1401 aa14.4□□□□□ -0.11
PPARG-201ENST00000287820 TRIM41Q8WV44 630 aa14.38□□□□□ -0.11
PPARG-201ENST00000287820 GRIN2AQ12879 1464 aa14.37□□□□□ -0.11
PPARG-201ENST00000287820 ADAMTS12P58397 1594 aa14.36□□□□□ -0.11
PPARG-201ENST00000287820 ARHGEF11O15085 1522 aa14.36□□□□□ -0.11
PPARG-201ENST00000287820 RIMBP3CA6NJZ7 1639 aa14.35□□□□□ -0.11
PPARG-201ENST00000287820 RIMBP3BA6NNM3 1639 aa14.35□□□□□ -0.11
PPARG-201ENST00000287820 RIMBP3Q9UFD9 1639 aa14.35□□□□□ -0.11
PPARG-201ENST00000287820 CLASP1Q7Z460 1538 aa14.35□□□□□ -0.11
PPARG-201ENST00000287820 NUP160Q12769 1436 aa14.32□□□□□ -0.12
PPARG-201ENST00000287820 CYB5RLQ6IPT4 315 aa14.31□□□□□ -0.12
PPARG-201ENST00000287820 CARMIL1Q5VZK9 1371 aa14.29□□□□□ -0.12
PPARG-201ENST00000287820 CEP170Q5SW79 1584 aa14.28□□□□□ -0.12
PPARG-201ENST00000287820 RUSC2Q8N2Y8 1516 aa14.28□□□□□ -0.12
PPARG-201ENST00000287820 JPH4Q96JJ6 628 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms