RNA–Protein interactions for RNA: ENST00000287078.6

TYSND1-201, Transcript of trypsin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TYSND1, Length 3,644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYSND1-201ENST00000287078 NISCHQ9Y2I1 1504 aa32.07■■■□□ 2.72
TYSND1-201ENST00000287078 DCAF8L2P0C7V8 631 aa28.4■■■□□ 2.14
TYSND1-201ENST00000287078 SHROOM4Q9ULL8 1493 aa28.38■■■□□ 2.13
TYSND1-201ENST00000287078 SUPT5HO00267 1087 aaKnown RBP27.78■■■□□ 2.04
TYSND1-201ENST00000287078 PCGF6Q9BYE7 350 aa27■■□□□ 1.91
TYSND1-201ENST00000287078 HRCP23327 699 aa26.94■■□□□ 1.9
TYSND1-201ENST00000287078 ZCCHC6Q5VYS8 1495 aaKnown RBP26.91■■□□□ 1.9
TYSND1-201ENST00000287078 PPARGC1BQ86YN6 1023 aaKnown RBP26.83■■□□□ 1.88
TYSND1-201ENST00000287078 CCDC180Q9P1Z9 1646 aa26.82■■□□□ 1.88
TYSND1-201ENST00000287078 CHIC1Q5VXU3 224 aa26.53■■□□□ 1.84
TYSND1-201ENST00000287078 ABCC9O60706 1549 aa26.41■■□□□ 1.82
TYSND1-201ENST00000287078 MYO15BQ96JP2 1530 aa26.37■■□□□ 1.81
TYSND1-201ENST00000287078 LOC105371045A0A1W2PR82 267 aa26.26■■□□□ 1.79
TYSND1-201ENST00000287078 EHMT2Q96KQ7 1210 aa26.12■■□□□ 1.77
TYSND1-201ENST00000287078 SCRIBQ14160 1630 aa25.98■■□□□ 1.75
TYSND1-201ENST00000287078 FAM9AQ8IZU1 332 aaPredicted RBP25.89■■□□□ 1.73
TYSND1-201ENST00000287078 TRIM26Q12899 539 aaPredicted RBP25.8■■□□□ 1.72
TYSND1-201ENST00000287078 DCAF1Q9Y4B6 1507 aa25.76■■□□□ 1.71
TYSND1-201ENST00000287078 PABPN1Q86U42 306 aaKnown RBP eCLIP25.61■■□□□ 1.69
TYSND1-201ENST00000287078 TRIM41Q8WV44 630 aa25.58■■□□□ 1.69
TYSND1-201ENST00000287078 PELP1Q8IZL8 1130 aaKnown RBP25.5■■□□□ 1.67
TYSND1-201ENST00000287078 RSF1Q96T23 1441 aaPredicted RBP25.48■■□□□ 1.67
TYSND1-201ENST00000287078 SCAF1Q9H7N4 1312 aaKnown RBP25.45■■□□□ 1.66
TYSND1-201ENST00000287078 CECR2Q9BXF3 1484 aa25.43■■□□□ 1.66
TYSND1-201ENST00000287078 ZEB1P37275 1124 aaPredicted RBP25.42■■□□□ 1.66
TYSND1-201ENST00000287078 TTBK1Q5TCY1 1321 aaPredicted RBP25.22■■□□□ 1.63
TYSND1-201ENST00000287078 NACADO15069 1562 aa25.22■■□□□ 1.63
TYSND1-201ENST00000287078 MROH2BQ7Z745 1585 aa25.12■■□□□ 1.61
TYSND1-201ENST00000287078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.12■■□□□ 1.61
TYSND1-201ENST00000287078 RB1CC1Q8TDY2 1594 aa25.11■■□□□ 1.61
TYSND1-201ENST00000287078 CCER1Q8TC90 406 aaPredicted RBP25.1■■□□□ 1.61
TYSND1-201ENST00000287078 NEUROD1Q13562 356 aa24.95■■□□□ 1.59
TYSND1-201ENST00000287078 GTF3C3Q9Y5Q9 886 aa24.92■■□□□ 1.58
TYSND1-201ENST00000287078 WIZO95785 1651 aa24.91■■□□□ 1.58
TYSND1-201ENST00000287078 ACIN1Q9UKV3 1341 aaKnown RBP24.9■■□□□ 1.58
TYSND1-201ENST00000287078 YTHDC1Q96MU7 727 aaKnown RBP24.84■■□□□ 1.57
TYSND1-201ENST00000287078 CENPBP07199 599 aaPredicted RBP24.82■■□□□ 1.56
TYSND1-201ENST00000287078 RANGAP1P46060 587 aaPredicted RBP24.81■■□□□ 1.56
TYSND1-201ENST00000287078 DIEXFQ68CQ4 756 aaKnown RBP24.79■■□□□ 1.56
TYSND1-201ENST00000287078 UBTFP17480 764 aaKnown RBP24.63■■□□□ 1.53
TYSND1-201ENST00000287078 BAZ1AQ9NRL2 1556 aaPredicted RBP24.61■■□□□ 1.53
TYSND1-201ENST00000287078 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
TYSND1-201ENST00000287078 ABCC8Q09428 1581 aa24.5■■□□□ 1.51
TYSND1-201ENST00000287078 SMARCA4P51532 1647 aa24.4■■□□□ 1.5
TYSND1-201ENST00000287078 MYT1Q01538 1121 aa24.34■■□□□ 1.49
TYSND1-201ENST00000287078 SOGA1O94964 1423 aa24.32■■□□□ 1.48
TYSND1-201ENST00000287078 UNC13AQ9UPW8 1703 aa24.32■■□□□ 1.48
TYSND1-201ENST00000287078 CSRNP3Q8WYN3 585 aa24.28■■□□□ 1.48
TYSND1-201ENST00000287078 TOP2AP11388 1531 aaKnown RBP24.28■■□□□ 1.48
TYSND1-201ENST00000287078 HNRNPUL2Q1KMD3 747 aaKnown RBP24.27■■□□□ 1.48
TYSND1-201ENST00000287078 BICRAQ9NZM4 1560 aa24.26■■□□□ 1.47
TYSND1-201ENST00000287078 ZNF316A6NFI3 1004 aaPredicted RBP24.24■■□□□ 1.47
TYSND1-201ENST00000287078 RUSC2Q8N2Y8 1516 aa24.2■■□□□ 1.46
TYSND1-201ENST00000287078 SMARCA2P51531 1590 aa24.19■■□□□ 1.46
TYSND1-201ENST00000287078 MIER1Q8N108 512 aa24.16■■□□□ 1.46
TYSND1-201ENST00000287078 BAZ1BQ9UIG0 1483 aaKnown RBP24.15■■□□□ 1.46
TYSND1-201ENST00000287078 ATAD2BQ9ULI0 1458 aa24.08■■□□□ 1.45
TYSND1-201ENST00000287078 WRNQ14191 1432 aaPredicted RBP eCLIP24.08■■□□□ 1.44
TYSND1-201ENST00000287078 APLP2Q06481 763 aa23.98■■□□□ 1.43
TYSND1-201ENST00000287078 CEP162Q5TB80 1403 aa23.95■■□□□ 1.42
TYSND1-201ENST00000287078 ATP1B4Q9UN42 357 aaPredicted RBP23.82■■□□□ 1.4
TYSND1-201ENST00000287078 EIF4G1Q04637 1599 aaKnown RBP23.81■■□□□ 1.4
TYSND1-201ENST00000287078 TNIKQ9UKE5 1360 aa23.75■■□□□ 1.39
TYSND1-201ENST00000287078 ITGAEP38570 1179 aa23.72■■□□□ 1.39
TYSND1-201ENST00000287078 SYNJ1O43426 1573 aa23.72■■□□□ 1.39
TYSND1-201ENST00000287078 BCANQ96GW7 911 aa23.69■■□□□ 1.38
TYSND1-201ENST00000287078 GOLGA3Q08378 1498 aa23.69■■□□□ 1.38
TYSND1-201ENST00000287078 P3H3Q8IVL6 736 aa23.69■■□□□ 1.38
TYSND1-201ENST00000287078 CLIP1P30622 1438 aa23.65■■□□□ 1.38
TYSND1-201ENST00000287078 RAPGEF2Q9Y4G8 1499 aa23.62■■□□□ 1.37
TYSND1-201ENST00000287078 EEA1Q15075 1411 aa23.61■■□□□ 1.37
TYSND1-201ENST00000287078 DNAJC5BQ9UF47 199 aa23.58■■□□□ 1.37
TYSND1-201ENST00000287078 SUPT16HQ9Y5B9 1047 aaKnown RBP23.57■■□□□ 1.36
TYSND1-201ENST00000287078 CEP164Q9UPV0 1460 aa23.54■■□□□ 1.36
TYSND1-201ENST00000287078 PEG3Q9GZU2 1588 aa23.54■■□□□ 1.36
TYSND1-201ENST00000287078 NCAPD3P42695 1498 aa23.51■■□□□ 1.35
TYSND1-201ENST00000287078 KANK4Q5T7N3 995 aaPredicted RBP23.41■■□□□ 1.34
TYSND1-201ENST00000287078 TSHZ2Q9NRE2 1034 aa23.37■■□□□ 1.33
TYSND1-201ENST00000287078 KIF27Q86VH2 1401 aa23.37■■□□□ 1.33
TYSND1-201ENST00000287078 CUX2O14529 1486 aa23.36■■□□□ 1.33
TYSND1-201ENST00000287078 CADPSQ9ULU8 1353 aa23.35■■□□□ 1.33
TYSND1-201ENST00000287078 KCNH8Q96L42 1107 aa23.34■■□□□ 1.33
TYSND1-201ENST00000287078 CUX1P39880 1505 aa23.33■■□□□ 1.33
TYSND1-201ENST00000287078 FKBP8Q14318 412 aa23.3■■□□□ 1.32
TYSND1-201ENST00000287078 ANP32EQ9BTT0 268 aa23.3■■□□□ 1.32
TYSND1-201ENST00000287078 NESP48681 1621 aa23.29■■□□□ 1.32
TYSND1-201ENST00000287078 ARID3CA6NKF2 412 aa23.28■■□□□ 1.32
TYSND1-201ENST00000287078 CFTRP13569 1480 aa23.28■■□□□ 1.32
TYSND1-201ENST00000287078 VPS8Q8N3P4 1428 aa23.27■■□□□ 1.32
TYSND1-201ENST00000287078 CC2D2AQ9P2K1 1620 aa23.24■■□□□ 1.31
TYSND1-201ENST00000287078 TOP2BQ02880 1626 aa23.24■■□□□ 1.31
TYSND1-201ENST00000287078 FAM50AQ14320 339 aaKnown RBP23.23■■□□□ 1.31
TYSND1-201ENST00000287078 HMGXB3Q12766 1538 aa23.23■■□□□ 1.31
TYSND1-201ENST00000287078 NEFLP07196 543 aa23.21■■□□□ 1.31
TYSND1-201ENST00000287078 DDX10Q13206 875 aaKnown RBP23.19■■□□□ 1.3
TYSND1-201ENST00000287078 HIRIP3Q9BW71 556 aaPredicted RBP23.19■■□□□ 1.3
TYSND1-201ENST00000287078 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
TYSND1-201ENST00000287078 RAD54L2Q9Y4B4 1467 aa23.17■■□□□ 1.3
TYSND1-201ENST00000287078 BCL11AQ9H165 835 aa23.16■■□□□ 1.3
TYSND1-201ENST00000287078 IGF1RP08069 1367 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms