RNA–Protein interactions for RNA: ENST00000279069.11

LSM14B-202, Transcript of LSM family member 14B, humanhuman

TSL 3

Gene LSM14B, Length 811 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14B-202ENST00000279069 NISCHQ9Y2I1 1504 aa67.27■■■■■ 8.36
LSM14B-202ENST00000279069 CCDC180Q9P1Z9 1646 aa59.91■■■■■ 7.18
LSM14B-202ENST00000279069 ABCC9O60706 1549 aa59.05■■■■■ 7.04
LSM14B-202ENST00000279069 RB1CC1Q8TDY2 1594 aa56.67■■■■■ 6.66
LSM14B-202ENST00000279069 DCAF8L2P0C7V8 631 aa56.63■■■■■ 6.66
LSM14B-202ENST00000279069 NACADO15069 1562 aa56.5■■■■■ 6.64
LSM14B-202ENST00000279069 MYO15BQ96JP2 1530 aa56.03■■■■■ 6.56
LSM14B-202ENST00000279069 ZCCHC6Q5VYS8 1495 aaKnown RBP55.93■■■■■ 6.54
LSM14B-202ENST00000279069 DCAF1Q9Y4B6 1507 aa55.64■■■■■ 6.5
LSM14B-202ENST00000279069 PABPN1Q86U42 306 aaKnown RBP eCLIP55.19■■■■■ 6.43
LSM14B-202ENST00000279069 UNC13AQ9UPW8 1703 aa55.08■■■■■ 6.41
LSM14B-202ENST00000279069 BICRAQ9NZM4 1560 aa54.77■■■■■ 6.36
LSM14B-202ENST00000279069 SCRIBQ14160 1630 aa54.66■■■■■ 6.34
LSM14B-202ENST00000279069 DNAJC5BQ9UF47 199 aa54.43■■■■■ 6.3
LSM14B-202ENST00000279069 SHROOM4Q9ULL8 1493 aa54.38■■■■■ 6.3
LSM14B-202ENST00000279069 EIF4G1Q04637 1599 aaKnown RBP53.47■■■■■ 6.15
LSM14B-202ENST00000279069 CC2D2AQ9P2K1 1620 aa53.33■■■■■ 6.13
LSM14B-202ENST00000279069 CECR2Q9BXF3 1484 aa53.14■■■■■ 6.1
LSM14B-202ENST00000279069 SMARCA4P51532 1647 aa52.23■■■■■ 5.95
LSM14B-202ENST00000279069 BAZ1AQ9NRL2 1556 aaPredicted RBP52.21■■■■■ 5.95
LSM14B-202ENST00000279069 NCAPD3P42695 1498 aa52.14■■■■■ 5.94
LSM14B-202ENST00000279069 ATAD2BQ9ULI0 1458 aa52.09■■■■■ 5.93
LSM14B-202ENST00000279069 SMARCA2P51531 1590 aa52.08■■■■■ 5.93
LSM14B-202ENST00000279069 HMGXB3Q12766 1538 aa51.82■■■■■ 5.89
LSM14B-202ENST00000279069 MROH2BQ7Z745 1585 aa51.79■■■■■ 5.88
LSM14B-202ENST00000279069 BAZ1BQ9UIG0 1483 aaKnown RBP51.73■■■■■ 5.87
LSM14B-202ENST00000279069 PEG3Q9GZU2 1588 aa51.7■■■■■ 5.87
LSM14B-202ENST00000279069 WIZO95785 1651 aa51.18■■■■■ 5.78
LSM14B-202ENST00000279069 RSF1Q96T23 1441 aaPredicted RBP51.13■■■■■ 5.78
LSM14B-202ENST00000279069 ERCC6Q03468 1493 aa51.07■■■■■ 5.77
LSM14B-202ENST00000279069 NESP48681 1621 aa50.91■■■■■ 5.74
LSM14B-202ENST00000279069 LAMC3Q9Y6N6 1575 aa50.81■■■■■ 5.72
LSM14B-202ENST00000279069 TOP2AP11388 1531 aaKnown RBP50.7■■■■■ 5.71
LSM14B-202ENST00000279069 CADPSQ9ULU8 1353 aa50.67■■■■■ 5.7
LSM14B-202ENST00000279069 PDS5BQ9NTI5 1447 aa50.62■■■■■ 5.69
LSM14B-202ENST00000279069 CUX2O14529 1486 aa50.57■■■■■ 5.69
LSM14B-202ENST00000279069 KIF21AQ7Z4S6 1674 aa50.23■■■■■ 5.63
LSM14B-202ENST00000279069 CFTRP13569 1480 aa50.22■■■■■ 5.63
LSM14B-202ENST00000279069 THOC2Q8NI27 1593 aaKnown RBP50.16■■■■■ 5.62
LSM14B-202ENST00000279069 CCDC88BA6NC98 1476 aa50.12■■■■■ 5.61
LSM14B-202ENST00000279069 FANCD2Q9BXW9 1451 aa50.05■■■■■ 5.6
LSM14B-202ENST00000279069 CEP164Q9UPV0 1460 aa50.05■■■■■ 5.6
LSM14B-202ENST00000279069 MRC2Q9UBG0 1479 aa50.03■■■■■ 5.6
LSM14B-202ENST00000279069 WDR62O43379 1518 aa49.79■■■■■ 5.56
LSM14B-202ENST00000279069 SUPT5HO00267 1087 aaKnown RBP49.76■■■■■ 5.56
LSM14B-202ENST00000279069 PRDM2Q13029 1718 aa49.65■■■■■ 5.54
LSM14B-202ENST00000279069 URB2Q14146 1524 aaKnown RBP49.48■■■■■ 5.51
LSM14B-202ENST00000279069 DNAJC5Q9H3Z4 198 aa49.46■■■■■ 5.51
LSM14B-202ENST00000279069 ABCC8Q09428 1581 aa49.28■■■■■ 5.48
LSM14B-202ENST00000279069 TOPBP1Q92547 1522 aa49.16■■■■■ 5.46
LSM14B-202ENST00000279069 DNMBPQ6XZF7 1577 aa49.08■■■■■ 5.45
LSM14B-202ENST00000279069 IFT140Q96RY7 1462 aa49.03■■■■■ 5.44
LSM14B-202ENST00000279069 POLA1P09884 1462 aaPredicted RBP48.72■■■■■ 5.39
LSM14B-202ENST00000279069 ZNF608Q9ULD9 1512 aaPredicted RBP48.71■■■■■ 5.39
LSM14B-202ENST00000279069 SOGA1O94964 1423 aa48.62■■■■■ 5.37
LSM14B-202ENST00000279069 CUX1P39880 1505 aa48.62■■■■■ 5.37
LSM14B-202ENST00000279069 FGD5Q6ZNL6 1462 aa48.57■■■■■ 5.37
LSM14B-202ENST00000279069 TARBP1Q13395 1621 aaKnown RBP48.56■■■■■ 5.36
LSM14B-202ENST00000279069 OSCARQ8IYS5 282 aa48.54■■■■■ 5.36
LSM14B-202ENST00000279069 RAD54L2Q9Y4B4 1467 aa48.51■■■■■ 5.36
LSM14B-202ENST00000279069 EIF4G3O43432 1585 aaKnown RBP48.49■■■■■ 5.35
LSM14B-202ENST00000279069 AQRO60306 1485 aaKnown RBP eCLIP48.47■■■■■ 5.351e-6■■■■□ 21.8
LSM14B-202ENST00000279069 TDRD9Q8NDG6 1382 aaKnown RBP48.37■■■■■ 5.33
LSM14B-202ENST00000279069 WRNQ14191 1432 aaPredicted RBP eCLIP48.31■■■■■ 5.32
LSM14B-202ENST00000279069 WDR97A6NE52 1622 aa48.28■■■■■ 5.32
LSM14B-202ENST00000279069 FBLN2P98095 1184 aa48.16■■■■■ 5.3
LSM14B-202ENST00000279069 TOP2BQ02880 1626 aa48.13■■■■■ 5.3
LSM14B-202ENST00000279069 ABCA10Q8WWZ4 1543 aa48.08■■■■■ 5.29
LSM14B-202ENST00000279069 GRIN2BQ13224 1484 aa48.08■■■■■ 5.29
LSM14B-202ENST00000279069 BIVM-ERCC5R4GMW8 1640 aa48.07■■■■■ 5.29
LSM14B-202ENST00000279069 SYNJ1O43426 1573 aa48.04■■■■■ 5.28
LSM14B-202ENST00000279069 GAPVD1Q14C86 1478 aa48.03■■■■■ 5.28
LSM14B-202ENST00000279069 SNAPC4Q5SXM2 1469 aa48.01■■■■■ 5.28
LSM14B-202ENST00000279069 MAGI1Q96QZ7 1491 aaPredicted RBP47.97■■■■■ 5.27
LSM14B-202ENST00000279069 CHMP7Q8WUX9 453 aaPredicted RBP47.97■■■■■ 5.27
LSM14B-202ENST00000279069 CHD1O14646 1710 aa47.89■■■■■ 5.26
LSM14B-202ENST00000279069 ABCA5Q8WWZ7 1642 aa47.82■■■■■ 5.25
LSM14B-202ENST00000279069 SYNJ2O15056 1496 aa47.79■■■■■ 5.24
LSM14B-202ENST00000279069 TRIM41Q8WV44 630 aa47.78■■■■■ 5.24
LSM14B-202ENST00000279069 PBRM1Q86U86 1689 aa47.77■■■■■ 5.24
LSM14B-202ENST00000279069 ARHGEF11O15085 1522 aa47.56■■■■■ 5.2
LSM14B-202ENST00000279069 RIMBP3CA6NJZ7 1639 aa47.55■■■■■ 5.2
LSM14B-202ENST00000279069 RIMBP3BA6NNM3 1639 aa47.55■■■■■ 5.2
LSM14B-202ENST00000279069 RIMBP3Q9UFD9 1639 aa47.55■■■■■ 5.2
LSM14B-202ENST00000279069 ERICH3Q5RHP9 1530 aa47.52■■■■■ 5.2
LSM14B-202ENST00000279069 FHAD1B1AJZ9 1412 aa47.48■■■■■ 5.19
LSM14B-202ENST00000279069 ADAMTS12P58397 1594 aa47.44■■■■■ 5.18
LSM14B-202ENST00000279069 CLASP1Q7Z460 1538 aa47.41■■■■■ 5.18
LSM14B-202ENST00000279069 GRIN2AQ12879 1464 aa47.4■■■■■ 5.18
LSM14B-202ENST00000279069 KIF27Q86VH2 1401 aa47.39■■■■■ 5.18
LSM14B-202ENST00000279069 CYB5RLQ6IPT4 315 aa47.3■■■■■ 5.16
LSM14B-202ENST00000279069 NUP160Q12769 1436 aa47.19■■■■■ 5.14
LSM14B-202ENST00000279069 IGF1RP08069 1367 aa47.15■■■■■ 5.14
LSM14B-202ENST00000279069 ARAP1Q96P48 1450 aa47.13■■■■■ 5.13
LSM14B-202ENST00000279069 CEP170Q5SW79 1584 aa47.09■■■■■ 5.13
LSM14B-202ENST00000279069 CUL7Q14999 1698 aa47■■■■■ 5.12
LSM14B-202ENST00000279069 CARMIL1Q5VZK9 1371 aa46.92■■■■■ 5.1
LSM14B-202ENST00000279069 JPH4Q96JJ6 628 aa46.84■■■■■ 5.09
LSM14B-202ENST00000279069 SHROOM2Q13796 1616 aa46.78■■■■■ 5.08
LSM14B-202ENST00000279069 PRG4Q92954 1404 aaPredicted RBP46.74■■■■■ 5.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms