RNA–Protein interactions for RNA: ENST00000274891.10

PRIM2-201, Transcript of DNA primase subunit 2, humanhuman

TSL 1 (best) BASIC

Gene PRIM2, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2-201ENST00000274891 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
PRIM2-201ENST00000274891 CHIC1Q5VXU3 224 aa20.25■□□□□ 0.83
PRIM2-201ENST00000274891 SENP3Q9H4L4 574 aaPredicted RBP18.58■□□□□ 0.56
PRIM2-201ENST00000274891 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
PRIM2-201ENST00000274891 FOXD1Q16676 465 aa17.25■□□□□ 0.35
PRIM2-201ENST00000274891 POTEDQ86YR6 584 aa17.03■□□□□ 0.32
PRIM2-201ENST00000274891 MSH5O43196 834 aa16.55■□□□□ 0.24
PRIM2-201ENST00000274891 PIAS4Q8N2W9 510 aaPredicted RBP16.07■□□□□ 0.16
PRIM2-201ENST00000274891 PLPPR3Q6T4P5 718 aa15.7■□□□□ 0.1
PRIM2-201ENST00000274891 PPP6R1Q9UPN7 881 aa15.6■□□□□ 0.09
PRIM2-201ENST00000274891 ADRA2BP18089 450 aa15.57■□□□□ 0.08
PRIM2-201ENST00000274891 NISCHQ9Y2I1 1504 aa14.93□□□□□ -0.02
PRIM2-201ENST00000274891 DMRT2Q9Y5R5 561 aa14.58□□□□□ -0.08
PRIM2-201ENST00000274891 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
PRIM2-201ENST00000274891 SCAF1Q9H7N4 1312 aaKnown RBP14.49□□□□□ -0.09
PRIM2-201ENST00000274891 MAPK8IP2Q13387 824 aaPredicted RBP14.45□□□□□ -0.1
PRIM2-201ENST00000274891 DCAF8L1A6NGE4 600 aa14.1□□□□□ -0.15
PRIM2-201ENST00000274891 RNF39Q9H2S5 420 aa13.96□□□□□ -0.17
PRIM2-201ENST00000274891 C1QBPQ07021 282 aaKnown RBP13.82□□□□□ -0.2
PRIM2-201ENST00000274891 HOXD11P31277 338 aaPredicted RBP13.79□□□□□ -0.2
PRIM2-201ENST00000274891 PPP4R3CPQ6ZMV5 832 aa13.62□□□□□ -0.23
PRIM2-201ENST00000274891 RNF216Q9NWF9 866 aaPredicted RBP13.57□□□□□ -0.24
PRIM2-201ENST00000274891 CNKSR2Q8WXI2 1034 aa13.55□□□□□ -0.24
PRIM2-201ENST00000274891 DNAJC5BQ9UF47 199 aa13.52□□□□□ -0.25
PRIM2-201ENST00000274891 ABCC9O60706 1549 aa13.4□□□□□ -0.26
PRIM2-201ENST00000274891 CCDC180Q9P1Z9 1646 aa13.37□□□□□ -0.27
PRIM2-201ENST00000274891 POTEHQ6S545 545 aa13.28□□□□□ -0.28
PRIM2-201ENST00000274891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.24□□□□□ -0.294e-7■■■■□ 23.1
PRIM2-201ENST00000274891 NCBP3Q53F19 620 aaKnown RBP13.06□□□□□ -0.32
PRIM2-201ENST00000274891 CAPN15O75808 1086 aa12.88□□□□□ -0.35
PRIM2-201ENST00000274891 DSG3P32926 999 aa12.86□□□□□ -0.35
PRIM2-201ENST00000274891 DCAF8L2P0C7V8 631 aa12.79□□□□□ -0.36
PRIM2-201ENST00000274891 RB1CC1Q8TDY2 1594 aa12.78□□□□□ -0.36
PRIM2-201ENST00000274891 U3KPZ7 1027 aaPredicted RBP12.75□□□□□ -0.37
PRIM2-201ENST00000274891 SPINK5Q9NQ38 1064 aaPredicted RBP12.74□□□□□ -0.37
PRIM2-201ENST00000274891 NPM3O75607 178 aaKnown RBP12.69□□□□□ -0.38
PRIM2-201ENST00000274891 NACADO15069 1562 aa12.68□□□□□ -0.38
PRIM2-201ENST00000274891 APLP2Q06481 763 aa12.62□□□□□ -0.39
PRIM2-201ENST00000274891 ZNF219Q9P2Y4 722 aaPredicted RBP12.52□□□□□ -0.41
PRIM2-201ENST00000274891 TRHP20396 242 aaPredicted RBP12.51□□□□□ -0.41
PRIM2-201ENST00000274891 PABPN1Q86U42 306 aaKnown RBP eCLIP12.5□□□□□ -0.41
PRIM2-201ENST00000274891 MYO15BQ96JP2 1530 aa12.48□□□□□ -0.41
PRIM2-201ENST00000274891 RBM42Q9BTD8 480 aaKnown RBP12.45□□□□□ -0.42
PRIM2-201ENST00000274891 ABCB7O75027 752 aa12.44□□□□□ -0.42
PRIM2-201ENST00000274891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.41□□□□□ -0.42
PRIM2-201ENST00000274891 HNRNPUL2Q1KMD3 747 aaKnown RBP12.41□□□□□ -0.42
PRIM2-201ENST00000274891 ZCCHC6Q5VYS8 1495 aaKnown RBP12.38□□□□□ -0.43
PRIM2-201ENST00000274891 DCAF1Q9Y4B6 1507 aa12.32□□□□□ -0.44
PRIM2-201ENST00000274891 CHRDL2Q6WN34 429 aa12.31□□□□□ -0.44
PRIM2-201ENST00000274891 UNC13AQ9UPW8 1703 aa12.3□□□□□ -0.44
PRIM2-201ENST00000274891 BICRAQ9NZM4 1560 aa12.26□□□□□ -0.45
PRIM2-201ENST00000274891 SAMD1Q6SPF0 538 aaPredicted RBP12.26□□□□□ -0.45
PRIM2-201ENST00000274891 SHROOM4Q9ULL8 1493 aa12.24□□□□□ -0.45
PRIM2-201ENST00000274891 SCRIBQ14160 1630 aa12.22□□□□□ -0.45
PRIM2-201ENST00000274891 SLC4A2P04920 1241 aa12.22□□□□□ -0.45
PRIM2-201ENST00000274891 SP7Q8TDD2 431 aaPredicted RBP12.18□□□□□ -0.46
PRIM2-201ENST00000274891 KCNA4P22459 653 aa12.09□□□□□ -0.47
PRIM2-201ENST00000274891 CECR2Q9BXF3 1484 aa12.08□□□□□ -0.47
PRIM2-201ENST00000274891 CC2D2AQ9P2K1 1620 aa12.06□□□□□ -0.48
PRIM2-201ENST00000274891 EIF4G1Q04637 1599 aaKnown RBP12.05□□□□□ -0.48
PRIM2-201ENST00000274891 POLA2Q14181 598 aa12.02□□□□□ -0.49
PRIM2-201ENST00000274891 AKT1S1Q96B36 256 aa11.97□□□□□ -0.49
PRIM2-201ENST00000274891 HAX1O00165 279 aa11.88□□□□□ -0.51
PRIM2-201ENST00000274891 ZBTB12Q9Y330 459 aaPredicted RBP11.86□□□□□ -0.51
PRIM2-201ENST00000274891 MYCNP04198 464 aaPredicted RBP11.84□□□□□ -0.51
PRIM2-201ENST00000274891 PIP4P2Q8N4L2 257 aa11.84□□□□□ -0.51
PRIM2-201ENST00000274891 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
PRIM2-201ENST00000274891 NCAPD3P42695 1498 aa11.7□□□□□ -0.54
PRIM2-201ENST00000274891 FXR2P51116 673 aaKnown RBP eCLIP11.68□□□□□ -0.54
PRIM2-201ENST00000274891 SMARCA2P51531 1590 aa11.67□□□□□ -0.54
PRIM2-201ENST00000274891 ERCC6Q03468 1493 aa11.66□□□□□ -0.54
PRIM2-201ENST00000274891 ATAD2BQ9ULI0 1458 aa11.65□□□□□ -0.54
PRIM2-201ENST00000274891 PITPNM1O00562 1244 aa11.65□□□□□ -0.54
PRIM2-201ENST00000274891 BAZ1AQ9NRL2 1556 aaPredicted RBP11.64□□□□□ -0.55
PRIM2-201ENST00000274891 SMARCA4P51532 1647 aa11.64□□□□□ -0.55
PRIM2-201ENST00000274891 HMGXB3Q12766 1538 aa11.61□□□□□ -0.55
PRIM2-201ENST00000274891 OSCARQ8IYS5 282 aa11.61□□□□□ -0.55
PRIM2-201ENST00000274891 BAZ1BQ9UIG0 1483 aaKnown RBP11.61□□□□□ -0.55
PRIM2-201ENST00000274891 CUX2O14529 1486 aa11.56□□□□□ -0.56
PRIM2-201ENST00000274891 EVX2Q03828 476 aa11.5□□□□□ -0.57
PRIM2-201ENST00000274891 MROH2BQ7Z745 1585 aa11.49□□□□□ -0.57
PRIM2-201ENST00000274891 PEG3Q9GZU2 1588 aa11.49□□□□□ -0.57
PRIM2-201ENST00000274891 DNAJC5Q9H3Z4 198 aa11.48□□□□□ -0.57
PRIM2-201ENST00000274891 NESP48681 1621 aa11.46□□□□□ -0.57
PRIM2-201ENST00000274891 SLC4A1APQ9BWU0 796 aaKnown RBP11.45□□□□□ -0.58
PRIM2-201ENST00000274891 PDS5BQ9NTI5 1447 aa11.44□□□□□ -0.58
PRIM2-201ENST00000274891 ATF5Q9Y2D1 282 aaPredicted RBP11.44□□□□□ -0.58
PRIM2-201ENST00000274891 LAMC3Q9Y6N6 1575 aa11.44□□□□□ -0.58
PRIM2-201ENST00000274891 LHX8Q68G74 356 aa11.43□□□□□ -0.58
PRIM2-201ENST00000274891 PRKAR2AP13861 404 aaKnown RBP11.39□□□□□ -0.59
PRIM2-201ENST00000274891 CADPSQ9ULU8 1353 aa11.38□□□□□ -0.59
PRIM2-201ENST00000274891 FOXD4L1Q9NU39 408 aa11.37□□□□□ -0.59
PRIM2-201ENST00000274891 SPDYE2BA6NHP3 402 aa11.36□□□□□ -0.59
PRIM2-201ENST00000274891 SPDYE6P0CI01 402 aa11.36□□□□□ -0.59
PRIM2-201ENST00000274891 SPDYE2Q495Y8 402 aa11.36□□□□□ -0.59
PRIM2-201ENST00000274891 SPDYE1Q8NFV5 336 aaPredicted RBP11.34□□□□□ -0.59
PRIM2-201ENST00000274891 WIZO95785 1651 aa11.33□□□□□ -0.6
PRIM2-201ENST00000274891 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
PRIM2-201ENST00000274891 CLEC11AQ9Y240 323 aa11.33□□□□□ -0.6
PRIM2-201ENST00000274891 GABBR2O75899 941 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 345.1 ms