RNA–Protein interactions for RNA: ENST00000270625.6

RPS11-201, Transcript of ribosomal protein S11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS11, Length 614 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS11-201ENST00000270625 NISCHQ9Y2I1 1504 aa23.46■■□□□ 1.35
RPS11-201ENST00000270625 CCDC180Q9P1Z9 1646 aa20.96■□□□□ 0.95
RPS11-201ENST00000270625 ABCC9O60706 1549 aa20.88■□□□□ 0.93
RPS11-201ENST00000270625 RB1CC1Q8TDY2 1594 aa19.91■□□□□ 0.78
RPS11-201ENST00000270625 NACADO15069 1562 aa19.82■□□□□ 0.76
RPS11-201ENST00000270625 DCAF8L2P0C7V8 631 aa19.73■□□□□ 0.75
RPS11-201ENST00000270625 MYO15BQ96JP2 1530 aa19.6■□□□□ 0.73
RPS11-201ENST00000270625 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.72
RPS11-201ENST00000270625 UNC13AQ9UPW8 1703 aa19.49■□□□□ 0.71
RPS11-201ENST00000270625 PABPN1Q86U42 306 aaKnown RBP eCLIP19.49■□□□□ 0.71
RPS11-201ENST00000270625 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
RPS11-201ENST00000270625 DCAF1Q9Y4B6 1507 aa19.39■□□□□ 0.69
RPS11-201ENST00000270625 BICRAQ9NZM4 1560 aa19.37■□□□□ 0.69
RPS11-201ENST00000270625 SCRIBQ14160 1630 aa19.11■□□□□ 0.65
RPS11-201ENST00000270625 SHROOM4Q9ULL8 1493 aa19.09■□□□□ 0.65
RPS11-201ENST00000270625 CC2D2AQ9P2K1 1620 aa18.88■□□□□ 0.61
RPS11-201ENST00000270625 EIF4G1Q04637 1599 aaKnown RBP18.86■□□□□ 0.61
RPS11-201ENST00000270625 CECR2Q9BXF3 1484 aa18.8■□□□□ 0.6
RPS11-201ENST00000270625 NCAPD3P42695 1498 aa18.33■□□□□ 0.52
RPS11-201ENST00000270625 ATAD2BQ9ULI0 1458 aa18.27■□□□□ 0.52
RPS11-201ENST00000270625 SMARCA4P51532 1647 aa18.26■□□□□ 0.51
RPS11-201ENST00000270625 SMARCA2P51531 1590 aa18.19■□□□□ 0.5
RPS11-201ENST00000270625 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
RPS11-201ENST00000270625 HMGXB3Q12766 1538 aa18.16■□□□□ 0.5
RPS11-201ENST00000270625 PEG3Q9GZU2 1588 aa18.1■□□□□ 0.49
RPS11-201ENST00000270625 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.49
RPS11-201ENST00000270625 BAZ1BQ9UIG0 1483 aaKnown RBP18.07■□□□□ 0.48
RPS11-201ENST00000270625 NESP48681 1621 aa17.99■□□□□ 0.47
RPS11-201ENST00000270625 ERCC6Q03468 1493 aa17.99■□□□□ 0.47
RPS11-201ENST00000270625 CUX2O14529 1486 aa17.95■□□□□ 0.46
RPS11-201ENST00000270625 DNAJC5Q9H3Z4 198 aa17.87■□□□□ 0.45
RPS11-201ENST00000270625 LAMC3Q9Y6N6 1575 aa17.86■□□□□ 0.45
RPS11-201ENST00000270625 WIZO95785 1651 aa17.86■□□□□ 0.45
RPS11-201ENST00000270625 THOC2Q8NI27 1593 aaKnown RBP17.77■□□□□ 0.44
RPS11-201ENST00000270625 CADPSQ9ULU8 1353 aa17.77■□□□□ 0.43
RPS11-201ENST00000270625 RSF1Q96T23 1441 aaPredicted RBP17.75■□□□□ 0.43
RPS11-201ENST00000270625 PDS5BQ9NTI5 1447 aa17.75■□□□□ 0.43
RPS11-201ENST00000270625 KIF21AQ7Z4S6 1674 aa17.73■□□□□ 0.43
RPS11-201ENST00000270625 TOP2AP11388 1531 aaKnown RBP17.62■□□□□ 0.41
RPS11-201ENST00000270625 MRC2Q9UBG0 1479 aa17.59■□□□□ 0.41
RPS11-201ENST00000270625 CFTRP13569 1480 aa17.58■□□□□ 0.41
RPS11-201ENST00000270625 WDR62O43379 1518 aa17.56■□□□□ 0.4
RPS11-201ENST00000270625 FANCD2Q9BXW9 1451 aa17.54■□□□□ 0.4
RPS11-201ENST00000270625 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
RPS11-201ENST00000270625 CCDC88BA6NC98 1476 aa17.45■□□□□ 0.38
RPS11-201ENST00000270625 URB2Q14146 1524 aaKnown RBP17.41■□□□□ 0.38
RPS11-201ENST00000270625 PRDM2Q13029 1718 aa17.37■□□□□ 0.37
RPS11-201ENST00000270625 TOPBP1Q92547 1522 aa17.23■□□□□ 0.35
RPS11-201ENST00000270625 IFT140Q96RY7 1462 aa17.19■□□□□ 0.34
RPS11-201ENST00000270625 ABCC8Q09428 1581 aa17.19■□□□□ 0.34
RPS11-201ENST00000270625 ZNF608Q9ULD9 1512 aaPredicted RBP17.17■□□□□ 0.34
RPS11-201ENST00000270625 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
RPS11-201ENST00000270625 DNMBPQ6XZF7 1577 aa17.16■□□□□ 0.34
RPS11-201ENST00000270625 TRIM41Q8WV44 630 aa17.08■□□□□ 0.32
RPS11-201ENST00000270625 TARBP1Q13395 1621 aaKnown RBP17.07■□□□□ 0.32
RPS11-201ENST00000270625 POLA1P09884 1462 aaPredicted RBP17.05■□□□□ 0.32
RPS11-201ENST00000270625 EIF4G3O43432 1585 aaKnown RBP17.05■□□□□ 0.32
RPS11-201ENST00000270625 AQRO60306 1485 aaKnown RBP eCLIP17.04■□□□□ 0.32not detected■■■■■ 69
RPS11-201ENST00000270625 SUPT5HO00267 1087 aaKnown RBP17.01■□□□□ 0.31
RPS11-201ENST00000270625 RAD54L2Q9Y4B4 1467 aa17■□□□□ 0.31
RPS11-201ENST00000270625 SOGA1O94964 1423 aa16.98■□□□□ 0.31
RPS11-201ENST00000270625 CUX1P39880 1505 aa16.97■□□□□ 0.31
RPS11-201ENST00000270625 FGD5Q6ZNL6 1462 aa16.96■□□□□ 0.31
RPS11-201ENST00000270625 TDRD9Q8NDG6 1382 aaKnown RBP16.95■□□□□ 0.3
RPS11-201ENST00000270625 RIMBP3CA6NJZ7 1639 aa16.92■□□□□ 0.3
RPS11-201ENST00000270625 RIMBP3BA6NNM3 1639 aa16.92■□□□□ 0.3
RPS11-201ENST00000270625 RIMBP3Q9UFD9 1639 aa16.92■□□□□ 0.3
RPS11-201ENST00000270625 CHD1O14646 1710 aa16.91■□□□□ 0.3
RPS11-201ENST00000270625 ARHGEF11O15085 1522 aa16.88■□□□□ 0.29
RPS11-201ENST00000270625 WDR97A6NE52 1622 aa16.88■□□□□ 0.29
RPS11-201ENST00000270625 FBLN2P98095 1184 aa16.87■□□□□ 0.29
RPS11-201ENST00000270625 SNAPC4Q5SXM2 1469 aa16.84■□□□□ 0.29
RPS11-201ENST00000270625 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
RPS11-201ENST00000270625 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
RPS11-201ENST00000270625 ABCA10Q8WWZ4 1543 aa16.78■□□□□ 0.28
RPS11-201ENST00000270625 CHMP7Q8WUX9 453 aaPredicted RBP16.77■□□□□ 0.28
RPS11-201ENST00000270625 GAPVD1Q14C86 1478 aa16.77■□□□□ 0.28
RPS11-201ENST00000270625 CYB5RLQ6IPT4 315 aa16.76■□□□□ 0.27
RPS11-201ENST00000270625 SYNJ2O15056 1496 aa16.75■□□□□ 0.27
RPS11-201ENST00000270625 CLASP1Q7Z460 1538 aa16.74■□□□□ 0.27
RPS11-201ENST00000270625 ABCA5Q8WWZ7 1642 aa16.74■□□□□ 0.27
RPS11-201ENST00000270625 PBRM1Q86U86 1689 aa16.73■□□□□ 0.27
RPS11-201ENST00000270625 ARAP1Q96P48 1450 aa16.73■□□□□ 0.27
RPS11-201ENST00000270625 WRNQ14191 1432 aaPredicted RBP eCLIP16.72■□□□□ 0.27
RPS11-201ENST00000270625 TOP2BQ02880 1626 aa16.72■□□□□ 0.27
RPS11-201ENST00000270625 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
RPS11-201ENST00000270625 SYNJ1O43426 1573 aa16.7■□□□□ 0.26
RPS11-201ENST00000270625 GRIN2AQ12879 1464 aa16.6■□□□□ 0.25
RPS11-201ENST00000270625 ADAMTS12P58397 1594 aa16.6■□□□□ 0.25
RPS11-201ENST00000270625 ERICH3Q5RHP9 1530 aa16.56■□□□□ 0.24
RPS11-201ENST00000270625 FHAD1B1AJZ9 1412 aa16.56■□□□□ 0.24
RPS11-201ENST00000270625 NUP160Q12769 1436 aa16.56■□□□□ 0.24
RPS11-201ENST00000270625 CEP170Q5SW79 1584 aa16.54■□□□□ 0.24
RPS11-201ENST00000270625 TRHP20396 242 aaPredicted RBP16.5■□□□□ 0.23
RPS11-201ENST00000270625 ERCC6L2Q5T890 1561 aa16.5■□□□□ 0.23
RPS11-201ENST00000270625 SHROOM2Q13796 1616 aa16.46■□□□□ 0.23
RPS11-201ENST00000270625 IGF1RP08069 1367 aa16.42■□□□□ 0.22
RPS11-201ENST00000270625 JPH4Q96JJ6 628 aa16.4■□□□□ 0.22
RPS11-201ENST00000270625 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
RPS11-201ENST00000270625 PRG4Q92954 1404 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms