RNA–Protein interactions for RNA: ENST00000269980.6

BCKDHA-201, Transcript of branched chain keto acid dehydrogenase E1, alpha polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCKDHA, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHA-201ENST00000269980 NISCHQ9Y2I1 1504 aa31.8■■■□□ 2.68
BCKDHA-201ENST00000269980 CCDC180Q9P1Z9 1646 aa27.49■■□□□ 1.99
BCKDHA-201ENST00000269980 ABCC9O60706 1549 aa27.09■■□□□ 1.93
BCKDHA-201ENST00000269980 ZCCHC6Q5VYS8 1495 aaKnown RBP26.91■■□□□ 1.9
BCKDHA-201ENST00000269980 SHROOM4Q9ULL8 1493 aa26.85■■□□□ 1.89
BCKDHA-201ENST00000269980 DCAF8L2P0C7V8 631 aa26.61■■□□□ 1.85
BCKDHA-201ENST00000269980 SUPT5HO00267 1087 aaKnown RBP26.23■■□□□ 1.79
BCKDHA-201ENST00000269980 DCAF1Q9Y4B6 1507 aa26.15■■□□□ 1.78
BCKDHA-201ENST00000269980 NACADO15069 1562 aa25.85■■□□□ 1.73
BCKDHA-201ENST00000269980 RB1CC1Q8TDY2 1594 aa25.83■■□□□ 1.73
BCKDHA-201ENST00000269980 MYO15BQ96JP2 1530 aa25.67■■□□□ 1.7
BCKDHA-201ENST00000269980 PABPN1Q86U42 306 aaKnown RBP eCLIP25.58■■□□□ 1.69
BCKDHA-201ENST00000269980 CHIC1Q5VXU3 224 aa25.57■■□□□ 1.68
BCKDHA-201ENST00000269980 SCRIBQ14160 1630 aa25.54■■□□□ 1.68
BCKDHA-201ENST00000269980 UNC13AQ9UPW8 1703 aa25.42■■□□□ 1.66
BCKDHA-201ENST00000269980 BICRAQ9NZM4 1560 aa25.26■■□□□ 1.63
BCKDHA-201ENST00000269980 RSF1Q96T23 1441 aaPredicted RBP25.09■■□□□ 1.61
BCKDHA-201ENST00000269980 DNAJC5BQ9UF47 199 aa24.8■■□□□ 1.56
BCKDHA-201ENST00000269980 CECR2Q9BXF3 1484 aa24.8■■□□□ 1.56
BCKDHA-201ENST00000269980 LOC105371045A0A1W2PR82 267 aa24.77■■□□□ 1.56
BCKDHA-201ENST00000269980 MROH2BQ7Z745 1585 aa24.72■■□□□ 1.55
BCKDHA-201ENST00000269980 WIZO95785 1651 aa24.63■■□□□ 1.53
BCKDHA-201ENST00000269980 HRCP23327 699 aa24.56■■□□□ 1.52
BCKDHA-201ENST00000269980 PCGF6Q9BYE7 350 aa24.56■■□□□ 1.52
BCKDHA-201ENST00000269980 EIF4G1Q04637 1599 aaKnown RBP24.5■■□□□ 1.51
BCKDHA-201ENST00000269980 BAZ1AQ9NRL2 1556 aaPredicted RBP24.46■■□□□ 1.51
BCKDHA-201ENST00000269980 TRIM41Q8WV44 630 aa24.44■■□□□ 1.5
BCKDHA-201ENST00000269980 CC2D2AQ9P2K1 1620 aa24.36■■□□□ 1.49
BCKDHA-201ENST00000269980 SMARCA4P51532 1647 aa24.3■■□□□ 1.48
BCKDHA-201ENST00000269980 FAM9AQ8IZU1 332 aaPredicted RBP24.21■■□□□ 1.47
BCKDHA-201ENST00000269980 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.46
BCKDHA-201ENST00000269980 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
BCKDHA-201ENST00000269980 ATAD2BQ9ULI0 1458 aa24.14■■□□□ 1.46
BCKDHA-201ENST00000269980 SMARCA2P51531 1590 aa24.1■■□□□ 1.45
BCKDHA-201ENST00000269980 PPARGC1BQ86YN6 1023 aaKnown RBP24.08■■□□□ 1.45
BCKDHA-201ENST00000269980 CCDC88BA6NC98 1476 aa24.06■■□□□ 1.44
BCKDHA-201ENST00000269980 ABCC8Q09428 1581 aa23.98■■□□□ 1.43
BCKDHA-201ENST00000269980 NCAPD3P42695 1498 aa23.97■■□□□ 1.43
BCKDHA-201ENST00000269980 EHMT2Q96KQ7 1210 aa23.96■■□□□ 1.43
BCKDHA-201ENST00000269980 BAZ1BQ9UIG0 1483 aaKnown RBP23.93■■□□□ 1.42
BCKDHA-201ENST00000269980 PEG3Q9GZU2 1588 aa23.91■■□□□ 1.42
BCKDHA-201ENST00000269980 HMGXB3Q12766 1538 aa23.77■■□□□ 1.4
BCKDHA-201ENST00000269980 SOGA1O94964 1423 aa23.69■■□□□ 1.38
BCKDHA-201ENST00000269980 RUSC2Q8N2Y8 1516 aa23.63■■□□□ 1.37
BCKDHA-201ENST00000269980 NESP48681 1621 aa23.62■■□□□ 1.37
BCKDHA-201ENST00000269980 SYNJ1O43426 1573 aa23.53■■□□□ 1.36
BCKDHA-201ENST00000269980 WRNQ14191 1432 aaPredicted RBP eCLIP23.52■■□□□ 1.36
BCKDHA-201ENST00000269980 EEA1Q15075 1411 aa23.52■■□□□ 1.36
BCKDHA-201ENST00000269980 CEP162Q5TB80 1403 aa23.51■■□□□ 1.35
BCKDHA-201ENST00000269980 ZEB1P37275 1124 aaPredicted RBP23.51■■□□□ 1.35
BCKDHA-201ENST00000269980 TNIKQ9UKE5 1360 aa23.48■■□□□ 1.35
BCKDHA-201ENST00000269980 CSRNP3Q8WYN3 585 aa23.45■■□□□ 1.34
BCKDHA-201ENST00000269980 CADPSQ9ULU8 1353 aa23.38■■□□□ 1.33
BCKDHA-201ENST00000269980 GOLGA3Q08378 1498 aa23.36■■□□□ 1.33
BCKDHA-201ENST00000269980 KIF21BO75037 1637 aa23.33■■□□□ 1.32
BCKDHA-201ENST00000269980 CFTRP13569 1480 aa23.28■■□□□ 1.32
BCKDHA-201ENST00000269980 UBTFP17480 764 aaKnown RBP23.26■■□□□ 1.31
BCKDHA-201ENST00000269980 TOP2BQ02880 1626 aa23.25■■□□□ 1.31
BCKDHA-201ENST00000269980 CEP164Q9UPV0 1460 aa23.25■■□□□ 1.31
BCKDHA-201ENST00000269980 BIVM-ERCC5R4GMW8 1640 aa23.21■■□□□ 1.31
BCKDHA-201ENST00000269980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.21■■□□□ 1.31
BCKDHA-201ENST00000269980 LAMC3Q9Y6N6 1575 aa23.18■■□□□ 1.3
BCKDHA-201ENST00000269980 TTBK1Q5TCY1 1321 aaPredicted RBP23.17■■□□□ 1.3
BCKDHA-201ENST00000269980 ERCC6Q03468 1493 aa23.16■■□□□ 1.3
BCKDHA-201ENST00000269980 KIF21AQ7Z4S6 1674 aa23.13■■□□□ 1.29
BCKDHA-201ENST00000269980 FANCD2Q9BXW9 1451 aa23.13■■□□□ 1.29
BCKDHA-201ENST00000269980 RAPGEF2Q9Y4G8 1499 aa23.13■■□□□ 1.29
BCKDHA-201ENST00000269980 PDS5BQ9NTI5 1447 aa23.09■■□□□ 1.29
BCKDHA-201ENST00000269980 CCER1Q8TC90 406 aaPredicted RBP23.07■■□□□ 1.28
BCKDHA-201ENST00000269980 CLIP1P30622 1438 aa23.06■■□□□ 1.28
BCKDHA-201ENST00000269980 CUX1P39880 1505 aa23.03■■□□□ 1.28
BCKDHA-201ENST00000269980 VPS8Q8N3P4 1428 aa22.99■■□□□ 1.27
BCKDHA-201ENST00000269980 PRDM2Q13029 1718 aa22.97■■□□□ 1.27
BCKDHA-201ENST00000269980 PRXQ9BXM0 1461 aa22.95■■□□□ 1.26
BCKDHA-201ENST00000269980 URB2Q14146 1524 aaKnown RBP22.95■■□□□ 1.26
BCKDHA-201ENST00000269980 ERICH3Q5RHP9 1530 aa22.95■■□□□ 1.26
BCKDHA-201ENST00000269980 THOC2Q8NI27 1593 aaKnown RBP22.88■■□□□ 1.25
BCKDHA-201ENST00000269980 MRC2Q9UBG0 1479 aa22.86■■□□□ 1.25
BCKDHA-201ENST00000269980 ARAP1Q96P48 1450 aa22.81■■□□□ 1.24
BCKDHA-201ENST00000269980 TOPBP1Q92547 1522 aa22.79■■□□□ 1.24
BCKDHA-201ENST00000269980 RANGAP1P46060 587 aaPredicted RBP22.78■■□□□ 1.24
BCKDHA-201ENST00000269980 KIF27Q86VH2 1401 aa22.77■■□□□ 1.24
BCKDHA-201ENST00000269980 WDR62O43379 1518 aa22.74■■□□□ 1.23
BCKDHA-201ENST00000269980 RAD54L2Q9Y4B4 1467 aa22.72■■□□□ 1.23
BCKDHA-201ENST00000269980 HNRNPUL2Q1KMD3 747 aaKnown RBP22.7■■□□□ 1.23
BCKDHA-201ENST00000269980 CUX2O14529 1486 aa22.7■■□□□ 1.22
BCKDHA-201ENST00000269980 DNMBPQ6XZF7 1577 aa22.68■■□□□ 1.22
BCKDHA-201ENST00000269980 FGD5Q6ZNL6 1462 aa22.67■■□□□ 1.22
BCKDHA-201ENST00000269980 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
BCKDHA-201ENST00000269980 APLP2Q06481 763 aa22.64■■□□□ 1.22
BCKDHA-201ENST00000269980 ARHGAP35Q9NRY4 1499 aa22.62■■□□□ 1.21
BCKDHA-201ENST00000269980 ZNF608Q9ULD9 1512 aaPredicted RBP22.61■■□□□ 1.21
BCKDHA-201ENST00000269980 DIEXFQ68CQ4 756 aaKnown RBP22.6■■□□□ 1.21
BCKDHA-201ENST00000269980 TDRD9Q8NDG6 1382 aaKnown RBP22.59■■□□□ 1.21
BCKDHA-201ENST00000269980 KANK4Q5T7N3 995 aaPredicted RBP22.58■■□□□ 1.21
BCKDHA-201ENST00000269980 IGF1RP08069 1367 aa22.58■■□□□ 1.2
BCKDHA-201ENST00000269980 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
BCKDHA-201ENST00000269980 AQRO60306 1485 aaKnown RBP eCLIP22.55■■□□□ 1.23e-6■■■■■ 34.2
BCKDHA-201ENST00000269980 TARBP1Q13395 1621 aaKnown RBP22.48■■□□□ 1.19
BCKDHA-201ENST00000269980 ZNF316A6NFI3 1004 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms