RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 NISCHQ9Y2I1 1504 aa29.77■■■□□ 2.36
SCAMP2-201ENST00000268099 SHROOM4Q9ULL8 1493 aa26.04■■□□□ 1.76
SCAMP2-201ENST00000268099 HRCP23327 699 aa26■■□□□ 1.75
SCAMP2-201ENST00000268099 SUPT5HO00267 1087 aaKnown RBP25.85■■□□□ 1.73
SCAMP2-201ENST00000268099 MYO15BQ96JP2 1530 aa25.63■■□□□ 1.69
SCAMP2-201ENST00000268099 PCGF6Q9BYE7 350 aa25.48■■□□□ 1.67
SCAMP2-201ENST00000268099 CHIC1Q5VXU3 224 aa25.46■■□□□ 1.67
SCAMP2-201ENST00000268099 PPARGC1BQ86YN6 1023 aaKnown RBP25.37■■□□□ 1.65
SCAMP2-201ENST00000268099 ZCCHC6Q5VYS8 1495 aaKnown RBP25.33■■□□□ 1.65
SCAMP2-201ENST00000268099 DCAF1Q9Y4B6 1507 aa25.14■■□□□ 1.62
SCAMP2-201ENST00000268099 CCDC180Q9P1Z9 1646 aa24.95■■□□□ 1.58
SCAMP2-201ENST00000268099 PELP1Q8IZL8 1130 aaKnown RBP24.88■■□□□ 1.57
SCAMP2-201ENST00000268099 TRIM26Q12899 539 aaPredicted RBP24.79■■□□□ 1.56
SCAMP2-201ENST00000268099 LOC105371045A0A1W2PR82 267 aa24.78■■□□□ 1.56
SCAMP2-201ENST00000268099 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.53
SCAMP2-201ENST00000268099 ZEB1P37275 1124 aaPredicted RBP24.58■■□□□ 1.53
SCAMP2-201ENST00000268099 SCAF1Q9H7N4 1312 aaKnown RBP24.47■■□□□ 1.51
SCAMP2-201ENST00000268099 ABCC9O60706 1549 aa24.08■■□□□ 1.45
SCAMP2-201ENST00000268099 TRIM41Q8WV44 630 aa23.98■■□□□ 1.43
SCAMP2-201ENST00000268099 ACIN1Q9UKV3 1341 aaKnown RBP23.95■■□□□ 1.42
SCAMP2-201ENST00000268099 MYT1Q01538 1121 aa23.88■■□□□ 1.41
SCAMP2-201ENST00000268099 FAM9AQ8IZU1 332 aaPredicted RBP23.88■■□□□ 1.41
SCAMP2-201ENST00000268099 RSF1Q96T23 1441 aaPredicted RBP23.86■■□□□ 1.41
SCAMP2-201ENST00000268099 NEUROD1Q13562 356 aa23.86■■□□□ 1.41
SCAMP2-201ENST00000268099 RB1CC1Q8TDY2 1594 aa23.79■■□□□ 1.4
SCAMP2-201ENST00000268099 EHMT2Q96KQ7 1210 aa23.72■■□□□ 1.39
SCAMP2-201ENST00000268099 GTF3C3Q9Y5Q9 886 aa23.7■■□□□ 1.38
SCAMP2-201ENST00000268099 CENPBP07199 599 aaPredicted RBP23.69■■□□□ 1.38
SCAMP2-201ENST00000268099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.68■■□□□ 1.38
SCAMP2-201ENST00000268099 CCER1Q8TC90 406 aaPredicted RBP23.66■■□□□ 1.38
SCAMP2-201ENST00000268099 DIEXFQ68CQ4 756 aaKnown RBP23.62■■□□□ 1.37
SCAMP2-201ENST00000268099 SCRIBQ14160 1630 aa23.58■■□□□ 1.37
SCAMP2-201ENST00000268099 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
SCAMP2-201ENST00000268099 ZNF316A6NFI3 1004 aaPredicted RBP23.23■■□□□ 1.31
SCAMP2-201ENST00000268099 CECR2Q9BXF3 1484 aa23.23■■□□□ 1.31
SCAMP2-201ENST00000268099 MROH2BQ7Z745 1585 aa23.21■■□□□ 1.31
SCAMP2-201ENST00000268099 EIF4G1Q04637 1599 aaKnown RBP23.17■■□□□ 1.3
SCAMP2-201ENST00000268099 WIZO95785 1651 aa23.16■■□□□ 1.3
SCAMP2-201ENST00000268099 TTBK1Q5TCY1 1321 aaPredicted RBP23.15■■□□□ 1.3
SCAMP2-201ENST00000268099 YTHDC1Q96MU7 727 aaKnown RBP23.14■■□□□ 1.29
SCAMP2-201ENST00000268099 CEP162Q5TB80 1403 aa23.09■■□□□ 1.29
SCAMP2-201ENST00000268099 BAZ1AQ9NRL2 1556 aaPredicted RBP23.06■■□□□ 1.28
SCAMP2-201ENST00000268099 MIER1Q8N108 512 aa23.02■■□□□ 1.28
SCAMP2-201ENST00000268099 TNIKQ9UKE5 1360 aa22.96■■□□□ 1.27
SCAMP2-201ENST00000268099 CCDC88BA6NC98 1476 aa22.93■■□□□ 1.26
SCAMP2-201ENST00000268099 ABCC8Q09428 1581 aa22.92■■□□□ 1.26
SCAMP2-201ENST00000268099 NACADO15069 1562 aa22.87■■□□□ 1.25
SCAMP2-201ENST00000268099 SOGA1O94964 1423 aa22.83■■□□□ 1.25
SCAMP2-201ENST00000268099 EEA1Q15075 1411 aa22.79■■□□□ 1.24
SCAMP2-201ENST00000268099 TOP2AP11388 1531 aaKnown RBP22.75■■□□□ 1.23
SCAMP2-201ENST00000268099 UBTFP17480 764 aaKnown RBP22.74■■□□□ 1.23
SCAMP2-201ENST00000268099 CSRNP3Q8WYN3 585 aa22.74■■□□□ 1.23
SCAMP2-201ENST00000268099 CLSPNQ9HAW4 1339 aa22.72■■□□□ 1.23
SCAMP2-201ENST00000268099 HNRNPUL2Q1KMD3 747 aaKnown RBP22.72■■□□□ 1.23
SCAMP2-201ENST00000268099 GOLGA3Q08378 1498 aa22.71■■□□□ 1.23
SCAMP2-201ENST00000268099 RUSC2Q8N2Y8 1516 aa22.69■■□□□ 1.22
SCAMP2-201ENST00000268099 SMARCA2P51531 1590 aa22.68■■□□□ 1.22
SCAMP2-201ENST00000268099 SUPT16HQ9Y5B9 1047 aaKnown RBP22.64■■□□□ 1.21
SCAMP2-201ENST00000268099 SMARCA4P51532 1647 aa22.54■■□□□ 1.2
SCAMP2-201ENST00000268099 TSHZ2Q9NRE2 1034 aa22.5■■□□□ 1.19
SCAMP2-201ENST00000268099 KIF21BO75037 1637 aa22.49■■□□□ 1.19
SCAMP2-201ENST00000268099 CEP164Q9UPV0 1460 aa22.49■■□□□ 1.19
SCAMP2-201ENST00000268099 CLIP1P30622 1438 aa22.48■■□□□ 1.19
SCAMP2-201ENST00000268099 VPS8Q8N3P4 1428 aa22.48■■□□□ 1.19
SCAMP2-201ENST00000268099 ANP32EQ9BTT0 268 aa22.48■■□□□ 1.19
SCAMP2-201ENST00000268099 APLP2Q06481 763 aa22.4■■□□□ 1.18
SCAMP2-201ENST00000268099 DHX57Q6P158 1386 aaKnown RBP22.38■■□□□ 1.17
SCAMP2-201ENST00000268099 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
SCAMP2-201ENST00000268099 SYNJ1O43426 1573 aa22.29■■□□□ 1.16
SCAMP2-201ENST00000268099 BCL11AQ9H165 835 aa22.28■■□□□ 1.16
SCAMP2-201ENST00000268099 RAPGEF2Q9Y4G8 1499 aa22.24■■□□□ 1.15
SCAMP2-201ENST00000268099 UNC13AQ9UPW8 1703 aa22.22■■□□□ 1.15
SCAMP2-201ENST00000268099 PABPN1Q86U42 306 aaKnown RBP eCLIP22.2■■□□□ 1.14
SCAMP2-201ENST00000268099 RANGAP1P46060 587 aaPredicted RBP22.18■■□□□ 1.14
SCAMP2-201ENST00000268099 KCNH8Q96L42 1107 aa22.11■■□□□ 1.13
SCAMP2-201ENST00000268099 BCANQ96GW7 911 aa22.1■■□□□ 1.13
SCAMP2-201ENST00000268099 CUX2O14529 1486 aa22.08■■□□□ 1.13
SCAMP2-201ENST00000268099 RRBP1Q9P2E9 1410 aaKnown RBP22.07■■□□□ 1.12
SCAMP2-201ENST00000268099 FKBP8Q14318 412 aa22.05■■□□□ 1.12
SCAMP2-201ENST00000268099 BICRAQ9NZM4 1560 aa22.05■■□□□ 1.12
SCAMP2-201ENST00000268099 ARAP1Q96P48 1450 aa22.05■■□□□ 1.12
SCAMP2-201ENST00000268099 KANK4Q5T7N3 995 aaPredicted RBP22.03■■□□□ 1.12
SCAMP2-201ENST00000268099 PEG3Q9GZU2 1588 aa22.03■■□□□ 1.12
SCAMP2-201ENST00000268099 ERICH3Q5RHP9 1530 aa21.98■■□□□ 1.11
SCAMP2-201ENST00000268099 RBM19Q9Y4C8 960 aaKnown RBP21.98■■□□□ 1.11
SCAMP2-201ENST00000268099 CCNB3Q8WWL7 1395 aa21.94■■□□□ 1.1
SCAMP2-201ENST00000268099 TOP2BQ02880 1626 aa21.93■■□□□ 1.1
SCAMP2-201ENST00000268099 MAPKBP1O60336 1514 aa21.92■■□□□ 1.1
SCAMP2-201ENST00000268099 NEFLP07196 543 aa21.91■■□□□ 1.1
SCAMP2-201ENST00000268099 PRXQ9BXM0 1461 aa21.9■■□□□ 1.1
SCAMP2-201ENST00000268099 DDX10Q13206 875 aaKnown RBP21.86■■□□□ 1.09
SCAMP2-201ENST00000268099 RAB3GAP2Q9H2M9 1393 aa21.85■■□□□ 1.09
SCAMP2-201ENST00000268099 BIVM-ERCC5R4GMW8 1640 aa21.84■■□□□ 1.09
SCAMP2-201ENST00000268099 ITGAEP38570 1179 aa21.83■■□□□ 1.09
SCAMP2-201ENST00000268099 WDR97A6NE52 1622 aa21.83■■□□□ 1.08
SCAMP2-201ENST00000268099 PPP1R15AO75807 674 aaPredicted RBP21.79■■□□□ 1.08
SCAMP2-201ENST00000268099 CCER2I3L3R5 266 aa21.77■■□□□ 1.07
SCAMP2-201ENST00000268099 ATAD2BQ9ULI0 1458 aa21.76■■□□□ 1.07
SCAMP2-201ENST00000268099 MSH5O43196 834 aa21.75■■□□□ 1.07
SCAMP2-201ENST00000268099 TRIM52Q96A61 297 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms