RNA–Protein interactions for RNA: ENST00000268042.6

ARRDC4-201, Transcript of arrestin domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARRDC4, Length 4,072 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC4-201ENST00000268042 NISCHQ9Y2I1 1504 aa28.22■■■□□ 2.11
ARRDC4-201ENST00000268042 DCAF8L2P0C7V8 631 aa27.18■■□□□ 1.94
ARRDC4-201ENST00000268042 SHROOM4Q9ULL8 1493 aa25.68■■□□□ 1.7
ARRDC4-201ENST00000268042 SUPT5HO00267 1087 aaKnown RBP25.26■■□□□ 1.63
ARRDC4-201ENST00000268042 ABCC9O60706 1549 aa24.66■■□□□ 1.54
ARRDC4-201ENST00000268042 PCGF6Q9BYE7 350 aa24.27■■□□□ 1.48
ARRDC4-201ENST00000268042 PPARGC1BQ86YN6 1023 aaKnown RBP24.23■■□□□ 1.47
ARRDC4-201ENST00000268042 EHMT2Q96KQ7 1210 aa24.18■■□□□ 1.46
ARRDC4-201ENST00000268042 HRCP23327 699 aa24.12■■□□□ 1.45
ARRDC4-201ENST00000268042 PABPN1Q86U42 306 aaKnown RBP eCLIP24.11■■□□□ 1.45
ARRDC4-201ENST00000268042 FAM9AQ8IZU1 332 aaPredicted RBP23.72■■□□□ 1.39
ARRDC4-201ENST00000268042 PELP1Q8IZL8 1130 aaKnown RBP23.68■■□□□ 1.38
ARRDC4-201ENST00000268042 CCDC180Q9P1Z9 1646 aa23.48■■□□□ 1.35
ARRDC4-201ENST00000268042 ZCCHC6Q5VYS8 1495 aaKnown RBP23.37■■□□□ 1.33
ARRDC4-201ENST00000268042 RANGAP1P46060 587 aaPredicted RBP23.28■■□□□ 1.32
ARRDC4-201ENST00000268042 TRIM41Q8WV44 630 aa23.28■■□□□ 1.32
ARRDC4-201ENST00000268042 SCRIBQ14160 1630 aa23.25■■□□□ 1.31
ARRDC4-201ENST00000268042 LOC105371045A0A1W2PR82 267 aa23.11■■□□□ 1.29
ARRDC4-201ENST00000268042 SCAF1Q9H7N4 1312 aaKnown RBP23.09■■□□□ 1.29
ARRDC4-201ENST00000268042 TTBK1Q5TCY1 1321 aaPredicted RBP23.05■■□□□ 1.28
ARRDC4-201ENST00000268042 CHIC1Q5VXU3 224 aa23.03■■□□□ 1.28
ARRDC4-201ENST00000268042 TRIM26Q12899 539 aaPredicted RBP22.81■■□□□ 1.24
ARRDC4-201ENST00000268042 RB1CC1Q8TDY2 1594 aa22.81■■□□□ 1.24
ARRDC4-201ENST00000268042 UBTFP17480 764 aaKnown RBP22.8■■□□□ 1.24
ARRDC4-201ENST00000268042 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
ARRDC4-201ENST00000268042 MYT1Q01538 1121 aa22.77■■□□□ 1.24
ARRDC4-201ENST00000268042 YTHDC1Q96MU7 727 aaKnown RBP22.73■■□□□ 1.23
ARRDC4-201ENST00000268042 GTF3C3Q9Y5Q9 886 aa22.7■■□□□ 1.22
ARRDC4-201ENST00000268042 ATP1B4Q9UN42 357 aaPredicted RBP22.69■■□□□ 1.22
ARRDC4-201ENST00000268042 ZEB1P37275 1124 aaPredicted RBP22.67■■□□□ 1.22
ARRDC4-201ENST00000268042 NACADO15069 1562 aa22.66■■□□□ 1.22
ARRDC4-201ENST00000268042 CENPBP07199 599 aaPredicted RBP22.62■■□□□ 1.21
ARRDC4-201ENST00000268042 APLP2Q06481 763 aa22.56■■□□□ 1.2
ARRDC4-201ENST00000268042 NEUROD1Q13562 356 aa22.55■■□□□ 1.2
ARRDC4-201ENST00000268042 ACIN1Q9UKV3 1341 aaKnown RBP22.49■■□□□ 1.19
ARRDC4-201ENST00000268042 CCER1Q8TC90 406 aaPredicted RBP22.49■■□□□ 1.19
ARRDC4-201ENST00000268042 CECR2Q9BXF3 1484 aa22.47■■□□□ 1.19
ARRDC4-201ENST00000268042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.39■■□□□ 1.17
ARRDC4-201ENST00000268042 RSF1Q96T23 1441 aaPredicted RBP22.35■■□□□ 1.17
ARRDC4-201ENST00000268042 DCAF1Q9Y4B6 1507 aa22.34■■□□□ 1.17
ARRDC4-201ENST00000268042 DIEXFQ68CQ4 756 aaKnown RBP22.26■■□□□ 1.15
ARRDC4-201ENST00000268042 FBLN2P98095 1184 aa22.26■■□□□ 1.15
ARRDC4-201ENST00000268042 HNRNPUL2Q1KMD3 747 aaKnown RBP22.11■■□□□ 1.13
ARRDC4-201ENST00000268042 MROH2BQ7Z745 1585 aa22.05■■□□□ 1.12
ARRDC4-201ENST00000268042 BAZ1BQ9UIG0 1483 aaKnown RBP22■■□□□ 1.11
ARRDC4-201ENST00000268042 P3H3Q8IVL6 736 aa21.97■■□□□ 1.11
ARRDC4-201ENST00000268042 ITGAEP38570 1179 aa21.95■■□□□ 1.1
ARRDC4-201ENST00000268042 ARID3CA6NKF2 412 aa21.92■■□□□ 1.1
ARRDC4-201ENST00000268042 BAZ1AQ9NRL2 1556 aaPredicted RBP21.91■■□□□ 1.1
ARRDC4-201ENST00000268042 CSRNP3Q8WYN3 585 aa21.89■■□□□ 1.1
ARRDC4-201ENST00000268042 WIZO95785 1651 aa21.72■■□□□ 1.07
ARRDC4-201ENST00000268042 BCANQ96GW7 911 aa21.68■■□□□ 1.06
ARRDC4-201ENST00000268042 DNAJC5BQ9UF47 199 aa21.66■■□□□ 1.06
ARRDC4-201ENST00000268042 MYT1LQ9UL68 1186 aa21.65■■□□□ 1.06
ARRDC4-201ENST00000268042 CCDC88BA6NC98 1476 aa21.64■■□□□ 1.05
ARRDC4-201ENST00000268042 BCL11AQ9H165 835 aa21.63■■□□□ 1.05
ARRDC4-201ENST00000268042 ATAD2BQ9ULI0 1458 aa21.59■■□□□ 1.05
ARRDC4-201ENST00000268042 MIER1Q8N108 512 aa21.58■■□□□ 1.05
ARRDC4-201ENST00000268042 ZNF316A6NFI3 1004 aaPredicted RBP21.55■■□□□ 1.04
ARRDC4-201ENST00000268042 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
ARRDC4-201ENST00000268042 ERCC6Q03468 1493 aa21.54■■□□□ 1.04
ARRDC4-201ENST00000268042 CHMP7Q8WUX9 453 aaPredicted RBP21.5■■□□□ 1.03
ARRDC4-201ENST00000268042 SMARCA4P51532 1647 aa21.47■■□□□ 1.03
ARRDC4-201ENST00000268042 SMARCA2P51531 1590 aa21.46■■□□□ 1.03
ARRDC4-201ENST00000268042 FAM50AQ14320 339 aaKnown RBP21.45■■□□□ 1.02
ARRDC4-201ENST00000268042 ABCC8Q09428 1581 aa21.43■■□□□ 1.02
ARRDC4-201ENST00000268042 ERICH6Q7L0X2 663 aa21.41■■□□□ 1.02
ARRDC4-201ENST00000268042 EIF4G1Q04637 1599 aaKnown RBP21.36■■□□□ 1.01
ARRDC4-201ENST00000268042 ANP32EQ9BTT0 268 aa21.36■■□□□ 1.01
ARRDC4-201ENST00000268042 SOGA1O94964 1423 aa21.34■■□□□ 1.01
ARRDC4-201ENST00000268042 CADPSQ9ULU8 1353 aa21.33■■□□□ 1.01
ARRDC4-201ENST00000268042 BICRAQ9NZM4 1560 aa21.32■■□□□ 1
ARRDC4-201ENST00000268042 TDRD9Q8NDG6 1382 aaKnown RBP21.31■■□□□ 1
ARRDC4-201ENST00000268042 TOP2AP11388 1531 aaKnown RBP21.29■■□□□ 1
ARRDC4-201ENST00000268042 ZNF777Q9ULD5 760 aaPredicted RBP21.25■□□□□ 0.99
ARRDC4-201ENST00000268042 PDS5BQ9NTI5 1447 aa21.2■□□□□ 0.98
ARRDC4-201ENST00000268042 CUX2O14529 1486 aa21.19■□□□□ 0.98
ARRDC4-201ENST00000268042 SUPT16HQ9Y5B9 1047 aaKnown RBP21.19■□□□□ 0.98
ARRDC4-201ENST00000268042 KIF27Q86VH2 1401 aa21.17■□□□□ 0.98
ARRDC4-201ENST00000268042 NEFLP07196 543 aa21.17■□□□□ 0.98
ARRDC4-201ENST00000268042 NESP48681 1621 aa21.14■□□□□ 0.98
ARRDC4-201ENST00000268042 NCAPD3P42695 1498 aa21.14■□□□□ 0.97
ARRDC4-201ENST00000268042 CC2D2AQ9P2K1 1620 aa21.13■□□□□ 0.97
ARRDC4-201ENST00000268042 TSHZ2Q9NRE2 1034 aa21.11■□□□□ 0.97
ARRDC4-201ENST00000268042 FKBP8Q14318 412 aa21.08■□□□□ 0.96
ARRDC4-201ENST00000268042 TRIM52Q96A61 297 aa21.07■□□□□ 0.96
ARRDC4-201ENST00000268042 KCNH8Q96L42 1107 aa21.05■□□□□ 0.96
ARRDC4-201ENST00000268042 FANCD2Q9BXW9 1451 aa21.05■□□□□ 0.96
ARRDC4-201ENST00000268042 CLIP1P30622 1438 aa21.05■□□□□ 0.96
ARRDC4-201ENST00000268042 CARMIL1Q5VZK9 1371 aa21.03■□□□□ 0.96
ARRDC4-201ENST00000268042 RUSC2Q8N2Y8 1516 aa21.03■□□□□ 0.96
ARRDC4-201ENST00000268042 UNC13AQ9UPW8 1703 aa21.02■□□□□ 0.96
ARRDC4-201ENST00000268042 NPM1P06748 294 aaKnown RBP eCLIP20.99■□□□□ 0.95
ARRDC4-201ENST00000268042 CHIC2Q9UKJ5 165 aa20.97■□□□□ 0.95
ARRDC4-201ENST00000268042 CEP164Q9UPV0 1460 aa20.97■□□□□ 0.95
ARRDC4-201ENST00000268042 CEP162Q5TB80 1403 aa20.96■□□□□ 0.95
ARRDC4-201ENST00000268042 CNGB1Q14028 1251 aaPredicted RBP20.95■□□□□ 0.94
ARRDC4-201ENST00000268042 CDK11AQ9UQ88 783 aaPredicted RBP20.95■□□□□ 0.94
ARRDC4-201ENST00000268042 GOLGA3Q08378 1498 aa20.93■□□□□ 0.94
ARRDC4-201ENST00000268042 POLR3GLQ9BT43 218 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms