RNA–Protein interactions for RNA: ENST00000266458.9

GABARAPL1-201, Transcript of GABA type A receptor associated protein like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABARAPL1, Length 1,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-201ENST00000266458 NISCHQ9Y2I1 1504 aa40.12■■■■■ 4.01
GABARAPL1-201ENST00000266458 CCDC180Q9P1Z9 1646 aa35.79■■■■□ 3.32
GABARAPL1-201ENST00000266458 ABCC9O60706 1549 aa35.67■■■■□ 3.3
GABARAPL1-201ENST00000266458 RB1CC1Q8TDY2 1594 aa33.99■■■■□ 3.03
GABARAPL1-201ENST00000266458 DCAF8L2P0C7V8 631 aa33.91■■■■□ 3.02
GABARAPL1-201ENST00000266458 NACADO15069 1562 aa33.82■■■■□ 3.01
GABARAPL1-201ENST00000266458 MYO15BQ96JP2 1530 aa33.43■■■□□ 2.94
GABARAPL1-201ENST00000266458 PABPN1Q86U42 306 aaKnown RBP eCLIP33.32■■■□□ 2.92
GABARAPL1-201ENST00000266458 ZCCHC6Q5VYS8 1495 aaKnown RBP33.3■■■□□ 2.92
GABARAPL1-201ENST00000266458 DNAJC5BQ9UF47 199 aa33.27■■■□□ 2.92
GABARAPL1-201ENST00000266458 UNC13AQ9UPW8 1703 aa33.17■■■□□ 2.9
GABARAPL1-201ENST00000266458 DCAF1Q9Y4B6 1507 aa33.11■■■□□ 2.89
GABARAPL1-201ENST00000266458 BICRAQ9NZM4 1560 aa33■■■□□ 2.87
GABARAPL1-201ENST00000266458 SCRIBQ14160 1630 aa32.73■■■□□ 2.83
GABARAPL1-201ENST00000266458 SHROOM4Q9ULL8 1493 aa32.52■■■□□ 2.8
GABARAPL1-201ENST00000266458 EIF4G1Q04637 1599 aaKnown RBP32.18■■■□□ 2.74
GABARAPL1-201ENST00000266458 CC2D2AQ9P2K1 1620 aa32.17■■■□□ 2.74
GABARAPL1-201ENST00000266458 CECR2Q9BXF3 1484 aa32.08■■■□□ 2.73
GABARAPL1-201ENST00000266458 NCAPD3P42695 1498 aa31.26■■■□□ 2.59
GABARAPL1-201ENST00000266458 ATAD2BQ9ULI0 1458 aa31.22■■■□□ 2.59
GABARAPL1-201ENST00000266458 SMARCA4P51532 1647 aa31.21■■■□□ 2.59
GABARAPL1-201ENST00000266458 BAZ1AQ9NRL2 1556 aaPredicted RBP31.11■■■□□ 2.57
GABARAPL1-201ENST00000266458 SMARCA2P51531 1590 aa31.11■■■□□ 2.57
GABARAPL1-201ENST00000266458 HMGXB3Q12766 1538 aa31.01■■■□□ 2.55
GABARAPL1-201ENST00000266458 MROH2BQ7Z745 1585 aa30.94■■■□□ 2.54
GABARAPL1-201ENST00000266458 BAZ1BQ9UIG0 1483 aaKnown RBP30.93■■■□□ 2.54
GABARAPL1-201ENST00000266458 PEG3Q9GZU2 1588 aa30.89■■■□□ 2.53
GABARAPL1-201ENST00000266458 ERCC6Q03468 1493 aa30.76■■■□□ 2.52
GABARAPL1-201ENST00000266458 NESP48681 1621 aa30.72■■■□□ 2.51
GABARAPL1-201ENST00000266458 WIZO95785 1651 aa30.57■■■□□ 2.48
GABARAPL1-201ENST00000266458 CUX2O14529 1486 aa30.56■■■□□ 2.48
GABARAPL1-201ENST00000266458 LAMC3Q9Y6N6 1575 aa30.47■■■□□ 2.47
GABARAPL1-201ENST00000266458 RSF1Q96T23 1441 aaPredicted RBP30.42■■■□□ 2.46
GABARAPL1-201ENST00000266458 CADPSQ9ULU8 1353 aa30.36■■■□□ 2.45
GABARAPL1-201ENST00000266458 PDS5BQ9NTI5 1447 aa30.34■■■□□ 2.45
GABARAPL1-201ENST00000266458 DNAJC5Q9H3Z4 198 aa30.3■■■□□ 2.44
GABARAPL1-201ENST00000266458 THOC2Q8NI27 1593 aaKnown RBP30.26■■■□□ 2.44
GABARAPL1-201ENST00000266458 KIF21AQ7Z4S6 1674 aa30.25■■■□□ 2.43
GABARAPL1-201ENST00000266458 TOP2AP11388 1531 aaKnown RBP30.18■■■□□ 2.42
GABARAPL1-201ENST00000266458 CFTRP13569 1480 aa30.04■■■□□ 2.4
GABARAPL1-201ENST00000266458 MRC2Q9UBG0 1479 aa30.04■■■□□ 2.4
GABARAPL1-201ENST00000266458 FANCD2Q9BXW9 1451 aa29.99■■■□□ 2.39
GABARAPL1-201ENST00000266458 CEP164Q9UPV0 1460 aa29.98■■■□□ 2.39
GABARAPL1-201ENST00000266458 WDR62O43379 1518 aa29.93■■■□□ 2.38
GABARAPL1-201ENST00000266458 CCDC88BA6NC98 1476 aa29.89■■■□□ 2.38
GABARAPL1-201ENST00000266458 SUPT5HO00267 1087 aaKnown RBP29.76■■■□□ 2.35
GABARAPL1-201ENST00000266458 URB2Q14146 1524 aaKnown RBP29.72■■■□□ 2.35
GABARAPL1-201ENST00000266458 PRDM2Q13029 1718 aa29.64■■■□□ 2.33
GABARAPL1-201ENST00000266458 TOPBP1Q92547 1522 aa29.45■■■□□ 2.3
GABARAPL1-201ENST00000266458 ABCC8Q09428 1581 aa29.38■■■□□ 2.29
GABARAPL1-201ENST00000266458 IFT140Q96RY7 1462 aa29.38■■■□□ 2.29
GABARAPL1-201ENST00000266458 ZNF608Q9ULD9 1512 aaPredicted RBP29.33■■■□□ 2.29
GABARAPL1-201ENST00000266458 DNMBPQ6XZF7 1577 aa29.33■■■□□ 2.29
GABARAPL1-201ENST00000266458 OSCARQ8IYS5 282 aa29.3■■■□□ 2.28
GABARAPL1-201ENST00000266458 POLA1P09884 1462 aaPredicted RBP29.17■■■□□ 2.26
GABARAPL1-201ENST00000266458 CHIC1Q5VXU3 224 aa29.15■■■□□ 2.26
GABARAPL1-201ENST00000266458 TRIM41Q8WV44 630 aa29.15■■■□□ 2.26
GABARAPL1-201ENST00000266458 TARBP1Q13395 1621 aaKnown RBP29.13■■■□□ 2.25
GABARAPL1-201ENST00000266458 AQRO60306 1485 aaKnown RBP eCLIP29.13■■■□□ 2.25
GABARAPL1-201ENST00000266458 EIF4G3O43432 1585 aaKnown RBP29.12■■■□□ 2.25
GABARAPL1-201ENST00000266458 RAD54L2Q9Y4B4 1467 aa29.1■■■□□ 2.25
GABARAPL1-201ENST00000266458 SOGA1O94964 1423 aa29.08■■■□□ 2.25
GABARAPL1-201ENST00000266458 CUX1P39880 1505 aa29.04■■■□□ 2.24
GABARAPL1-201ENST00000266458 FGD5Q6ZNL6 1462 aa29.03■■■□□ 2.24
GABARAPL1-201ENST00000266458 TDRD9Q8NDG6 1382 aaKnown RBP29.01■■■□□ 2.23
GABARAPL1-201ENST00000266458 FBLN2P98095 1184 aa28.94■■■□□ 2.22
GABARAPL1-201ENST00000266458 CHD1O14646 1710 aa28.83■■■□□ 2.21
GABARAPL1-201ENST00000266458 RIMBP3CA6NJZ7 1639 aa28.81■■■□□ 2.2
GABARAPL1-201ENST00000266458 RIMBP3BA6NNM3 1639 aa28.81■■■□□ 2.2
GABARAPL1-201ENST00000266458 RIMBP3Q9UFD9 1639 aa28.81■■■□□ 2.2
GABARAPL1-201ENST00000266458 SNAPC4Q5SXM2 1469 aa28.81■■■□□ 2.2
GABARAPL1-201ENST00000266458 WDR97A6NE52 1622 aa28.8■■■□□ 2.2
GABARAPL1-201ENST00000266458 ARHGEF11O15085 1522 aa28.77■■■□□ 2.2
GABARAPL1-201ENST00000266458 GRIN2BQ13224 1484 aa28.76■■■□□ 2.19
GABARAPL1-201ENST00000266458 CHMP7Q8WUX9 453 aaPredicted RBP28.74■■■□□ 2.19
GABARAPL1-201ENST00000266458 GAPVD1Q14C86 1478 aa28.71■■■□□ 2.19
GABARAPL1-201ENST00000266458 MAGI1Q96QZ7 1491 aaPredicted RBP28.71■■■□□ 2.19
GABARAPL1-201ENST00000266458 ABCA10Q8WWZ4 1543 aa28.7■■■□□ 2.19
GABARAPL1-201ENST00000266458 WRNQ14191 1432 aaPredicted RBP eCLIP28.69■■■□□ 2.18
GABARAPL1-201ENST00000266458 CYB5RLQ6IPT4 315 aa28.64■■■□□ 2.17
GABARAPL1-201ENST00000266458 TOP2BQ02880 1626 aa28.62■■■□□ 2.17
GABARAPL1-201ENST00000266458 SYNJ1O43426 1573 aa28.62■■■□□ 2.17
GABARAPL1-201ENST00000266458 SYNJ2O15056 1496 aa28.62■■■□□ 2.17
GABARAPL1-201ENST00000266458 ABCA5Q8WWZ7 1642 aa28.6■■■□□ 2.17
GABARAPL1-201ENST00000266458 BIVM-ERCC5R4GMW8 1640 aa28.6■■■□□ 2.17
GABARAPL1-201ENST00000266458 PBRM1Q86U86 1689 aa28.59■■■□□ 2.17
GABARAPL1-201ENST00000266458 CLASP1Q7Z460 1538 aa28.53■■■□□ 2.16
GABARAPL1-201ENST00000266458 ARAP1Q96P48 1450 aa28.51■■■□□ 2.15
GABARAPL1-201ENST00000266458 HRCP23327 699 aa28.41■■■□□ 2.14
GABARAPL1-201ENST00000266458 GRIN2AQ12879 1464 aa28.39■■■□□ 2.13
GABARAPL1-201ENST00000266458 ADAMTS12P58397 1594 aa28.37■■■□□ 2.13
GABARAPL1-201ENST00000266458 FHAD1B1AJZ9 1412 aa28.35■■■□□ 2.13
GABARAPL1-201ENST00000266458 ERICH3Q5RHP9 1530 aa28.33■■■□□ 2.13
GABARAPL1-201ENST00000266458 NUP160Q12769 1436 aa28.27■■■□□ 2.12
GABARAPL1-201ENST00000266458 CEP170Q5SW79 1584 aa28.26■■■□□ 2.11
GABARAPL1-201ENST00000266458 TRHP20396 242 aaPredicted RBP28.23■■■□□ 2.11
GABARAPL1-201ENST00000266458 ERCC6L2Q5T890 1561 aa28.16■■■□□ 2.1
GABARAPL1-201ENST00000266458 PCGF6Q9BYE7 350 aa28.15■■■□□ 2.1
GABARAPL1-201ENST00000266458 KIF27Q86VH2 1401 aa28.12■■■□□ 2.09
GABARAPL1-201ENST00000266458 IGF1RP08069 1367 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms