RNA–Protein interactions for RNA: ENST00000265538.3

RHOA-201, Transcript of ras homolog family member A, humanhuman

TSL 4

Gene RHOA, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOA-201ENST00000265538 NISCHQ9Y2I1 1504 aa45.57■■■■■ 4.89
RHOA-201ENST00000265538 CCDC180Q9P1Z9 1646 aa40.44■■■■■ 4.06
RHOA-201ENST00000265538 ABCC9O60706 1549 aa39.82■■■■□ 3.97
RHOA-201ENST00000265538 DCAF8L2P0C7V8 631 aa38.22■■■■□ 3.71
RHOA-201ENST00000265538 RB1CC1Q8TDY2 1594 aa38.22■■■■□ 3.71
RHOA-201ENST00000265538 NACADO15069 1562 aa38.19■■■■□ 3.7
RHOA-201ENST00000265538 MYO15BQ96JP2 1530 aa37.97■■■■□ 3.67
RHOA-201ENST00000265538 ZCCHC6Q5VYS8 1495 aaKnown RBP37.9■■■■□ 3.66
RHOA-201ENST00000265538 DCAF1Q9Y4B6 1507 aa37.72■■■■□ 3.63
RHOA-201ENST00000265538 PABPN1Q86U42 306 aaKnown RBP eCLIP37.29■■■■□ 3.56
RHOA-201ENST00000265538 UNC13AQ9UPW8 1703 aa37.18■■■■□ 3.54
RHOA-201ENST00000265538 BICRAQ9NZM4 1560 aa37.07■■■■□ 3.52
RHOA-201ENST00000265538 SCRIBQ14160 1630 aa36.88■■■■□ 3.5
RHOA-201ENST00000265538 DNAJC5BQ9UF47 199 aa36.85■■■■□ 3.49
RHOA-201ENST00000265538 SHROOM4Q9ULL8 1493 aa36.72■■■■□ 3.47
RHOA-201ENST00000265538 EIF4G1Q04637 1599 aaKnown RBP36.1■■■■□ 3.37
RHOA-201ENST00000265538 CC2D2AQ9P2K1 1620 aa35.97■■■■□ 3.35
RHOA-201ENST00000265538 CECR2Q9BXF3 1484 aa35.83■■■■□ 3.33
RHOA-201ENST00000265538 NCAPD3P42695 1498 aa35.32■■■■□ 3.24
RHOA-201ENST00000265538 SMARCA4P51532 1647 aa35.31■■■■□ 3.24
RHOA-201ENST00000265538 BAZ1AQ9NRL2 1556 aaPredicted RBP35.3■■■■□ 3.24
RHOA-201ENST00000265538 ATAD2BQ9ULI0 1458 aa35.28■■■■□ 3.24
RHOA-201ENST00000265538 SMARCA2P51531 1590 aa35.16■■■■□ 3.22
RHOA-201ENST00000265538 MROH2BQ7Z745 1585 aa35.09■■■■□ 3.21
RHOA-201ENST00000265538 PEG3Q9GZU2 1588 aa35.03■■■■□ 3.2
RHOA-201ENST00000265538 HMGXB3Q12766 1538 aa35.01■■■■□ 3.2
RHOA-201ENST00000265538 BAZ1BQ9UIG0 1483 aaKnown RBP34.91■■■■□ 3.18
RHOA-201ENST00000265538 RSF1Q96T23 1441 aaPredicted RBP34.71■■■■□ 3.15
RHOA-201ENST00000265538 WIZO95785 1651 aa34.63■■■■□ 3.13
RHOA-201ENST00000265538 NESP48681 1621 aa34.41■■■■□ 3.1
RHOA-201ENST00000265538 ERCC6Q03468 1493 aa34.33■■■■□ 3.09
RHOA-201ENST00000265538 TOP2AP11388 1531 aaKnown RBP34.3■■■■□ 3.08
RHOA-201ENST00000265538 LAMC3Q9Y6N6 1575 aa34.29■■■■□ 3.08
RHOA-201ENST00000265538 CADPSQ9ULU8 1353 aa34.29■■■■□ 3.08
RHOA-201ENST00000265538 PDS5BQ9NTI5 1447 aa34.17■■■■□ 3.06
RHOA-201ENST00000265538 CUX2O14529 1486 aa34.07■■■■□ 3.04
RHOA-201ENST00000265538 CFTRP13569 1480 aa34.01■■■■□ 3.04
RHOA-201ENST00000265538 CCDC88BA6NC98 1476 aa33.98■■■■□ 3.03
RHOA-201ENST00000265538 KIF21AQ7Z4S6 1674 aa33.85■■■■□ 3.01
RHOA-201ENST00000265538 THOC2Q8NI27 1593 aaKnown RBP33.84■■■■□ 3.01
RHOA-201ENST00000265538 FANCD2Q9BXW9 1451 aa33.82■■■■□ 3
RHOA-201ENST00000265538 MRC2Q9UBG0 1479 aa33.76■■■□□ 2.99
RHOA-201ENST00000265538 CEP164Q9UPV0 1460 aa33.76■■■□□ 2.99
RHOA-201ENST00000265538 SUPT5HO00267 1087 aaKnown RBP33.72■■■□□ 2.99
RHOA-201ENST00000265538 WDR62O43379 1518 aa33.63■■■□□ 2.97
RHOA-201ENST00000265538 URB2Q14146 1524 aaKnown RBP33.47■■■□□ 2.95
RHOA-201ENST00000265538 PRDM2Q13029 1718 aa33.46■■■□□ 2.95
RHOA-201ENST00000265538 DNAJC5Q9H3Z4 198 aa33.34■■■□□ 2.93
RHOA-201ENST00000265538 ABCC8Q09428 1581 aa33.3■■■□□ 2.92
RHOA-201ENST00000265538 TOPBP1Q92547 1522 aa33.24■■■□□ 2.91
RHOA-201ENST00000265538 DNMBPQ6XZF7 1577 aa33.14■■■□□ 2.9
RHOA-201ENST00000265538 IFT140Q96RY7 1462 aa33.11■■■□□ 2.89
RHOA-201ENST00000265538 POLA1P09884 1462 aaPredicted RBP32.95■■■□□ 2.87
RHOA-201ENST00000265538 ZNF608Q9ULD9 1512 aaPredicted RBP32.94■■■□□ 2.86
RHOA-201ENST00000265538 CUX1P39880 1505 aa32.92■■■□□ 2.86
RHOA-201ENST00000265538 SOGA1O94964 1423 aa32.89■■■□□ 2.86
RHOA-201ENST00000265538 TARBP1Q13395 1621 aaKnown RBP32.84■■■□□ 2.85
RHOA-201ENST00000265538 FGD5Q6ZNL6 1462 aa32.83■■■□□ 2.85
RHOA-201ENST00000265538 RAD54L2Q9Y4B4 1467 aa32.83■■■□□ 2.85
RHOA-201ENST00000265538 AQRO60306 1485 aaKnown RBP eCLIP32.78■■■□□ 2.84
RHOA-201ENST00000265538 OSCARQ8IYS5 282 aa32.75■■■□□ 2.83
RHOA-201ENST00000265538 TDRD9Q8NDG6 1382 aaKnown RBP32.71■■■□□ 2.83
RHOA-201ENST00000265538 WRNQ14191 1432 aaPredicted RBP eCLIP32.7■■■□□ 2.83
RHOA-201ENST00000265538 EIF4G3O43432 1585 aaKnown RBP32.69■■■□□ 2.82
RHOA-201ENST00000265538 WDR97A6NE52 1622 aa32.59■■■□□ 2.81
RHOA-201ENST00000265538 TOP2BQ02880 1626 aa32.57■■■□□ 2.8
RHOA-201ENST00000265538 ABCA10Q8WWZ4 1543 aa32.55■■■□□ 2.8
RHOA-201ENST00000265538 SYNJ1O43426 1573 aa32.52■■■□□ 2.8
RHOA-201ENST00000265538 BIVM-ERCC5R4GMW8 1640 aa32.51■■■□□ 2.8
RHOA-201ENST00000265538 GRIN2BQ13224 1484 aa32.48■■■□□ 2.79
RHOA-201ENST00000265538 GAPVD1Q14C86 1478 aa32.46■■■□□ 2.79
RHOA-201ENST00000265538 FBLN2P98095 1184 aa32.44■■■□□ 2.78
RHOA-201ENST00000265538 SNAPC4Q5SXM2 1469 aa32.41■■■□□ 2.78
RHOA-201ENST00000265538 MAGI1Q96QZ7 1491 aaPredicted RBP32.39■■■□□ 2.78
RHOA-201ENST00000265538 CHMP7Q8WUX9 453 aaPredicted RBP32.36■■■□□ 2.77
RHOA-201ENST00000265538 ABCA5Q8WWZ7 1642 aa32.33■■■□□ 2.77
RHOA-201ENST00000265538 SYNJ2O15056 1496 aa32.28■■■□□ 2.76
RHOA-201ENST00000265538 CHD1O14646 1710 aa32.24■■■□□ 2.75
RHOA-201ENST00000265538 PBRM1Q86U86 1689 aa32.2■■■□□ 2.74
RHOA-201ENST00000265538 ERICH3Q5RHP9 1530 aa32.14■■■□□ 2.74
RHOA-201ENST00000265538 FHAD1B1AJZ9 1412 aa32.1■■■□□ 2.73
RHOA-201ENST00000265538 TRIM41Q8WV44 630 aa32.07■■■□□ 2.72
RHOA-201ENST00000265538 ARHGEF11O15085 1522 aa32.05■■■□□ 2.72
RHOA-201ENST00000265538 KIF27Q86VH2 1401 aa32.05■■■□□ 2.72
RHOA-201ENST00000265538 GRIN2AQ12879 1464 aa32.03■■■□□ 2.72
RHOA-201ENST00000265538 ADAMTS12P58397 1594 aa32.02■■■□□ 2.72
RHOA-201ENST00000265538 CLASP1Q7Z460 1538 aa32.02■■■□□ 2.72
RHOA-201ENST00000265538 RIMBP3CA6NJZ7 1639 aa32.02■■■□□ 2.72
RHOA-201ENST00000265538 RIMBP3BA6NNM3 1639 aa32.02■■■□□ 2.72
RHOA-201ENST00000265538 RIMBP3Q9UFD9 1639 aa32.02■■■□□ 2.72
RHOA-201ENST00000265538 IGF1RP08069 1367 aa32.02■■■□□ 2.72
RHOA-201ENST00000265538 NUP160Q12769 1436 aa31.94■■■□□ 2.7
RHOA-201ENST00000265538 CYB5RLQ6IPT4 315 aa31.9■■■□□ 2.7
RHOA-201ENST00000265538 CEP170Q5SW79 1584 aa31.82■■■□□ 2.68
RHOA-201ENST00000265538 ARAP1Q96P48 1450 aa31.79■■■□□ 2.68
RHOA-201ENST00000265538 CARMIL1Q5VZK9 1371 aa31.79■■■□□ 2.68
RHOA-201ENST00000265538 CUL7Q14999 1698 aa31.72■■■□□ 2.67
RHOA-201ENST00000265538 JPH4Q96JJ6 628 aa31.71■■■□□ 2.67
RHOA-201ENST00000265538 RUSC2Q8N2Y8 1516 aa31.68■■■□□ 2.66
RHOA-201ENST00000265538 SHROOM2Q13796 1616 aa31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms