RNA–Protein interactions for RNA: ENST00000264052.9

SP100-201, Transcript of SP100 nuclear antigen, humanhuman

TSL 1 (best) BASIC

Gene SP100, Length 3,882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP100-201ENST00000264052 NISCHQ9Y2I1 1504 aa18.91■□□□□ 0.62
SP100-201ENST00000264052 SHROOM4Q9ULL8 1493 aa17.7■□□□□ 0.42
SP100-201ENST00000264052 SUPT5HO00267 1087 aaKnown RBP17.62■□□□□ 0.41
SP100-201ENST00000264052 PPARGC1BQ86YN6 1023 aaKnown RBP17.32■□□□□ 0.36
SP100-201ENST00000264052 PCGF6Q9BYE7 350 aa17.31■□□□□ 0.36
SP100-201ENST00000264052 HRCP23327 699 aa17.18■□□□□ 0.34
SP100-201ENST00000264052 DCAF8L2P0C7V8 631 aa17.01■□□□□ 0.31
SP100-201ENST00000264052 MYO15BQ96JP2 1530 aa16.85■□□□□ 0.29
SP100-201ENST00000264052 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
SP100-201ENST00000264052 LOC105371045A0A1W2PR82 267 aa16.8■□□□□ 0.28
SP100-201ENST00000264052 EHMT2Q96KQ7 1210 aa16.77■□□□□ 0.27
SP100-201ENST00000264052 FAM9AQ8IZU1 332 aaPredicted RBP16.47■□□□□ 0.23
SP100-201ENST00000264052 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
SP100-201ENST00000264052 TRIM26Q12899 539 aaPredicted RBP16.36■□□□□ 0.21
SP100-201ENST00000264052 TTBK1Q5TCY1 1321 aaPredicted RBP16.27■□□□□ 0.19
SP100-201ENST00000264052 PELP1Q8IZL8 1130 aaKnown RBP16.22■□□□□ 0.19
SP100-201ENST00000264052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.16
SP100-201ENST00000264052 DCAF1Q9Y4B6 1507 aa16.08■□□□□ 0.16
SP100-201ENST00000264052 ZEB1P37275 1124 aaPredicted RBP16.04■□□□□ 0.16
SP100-201ENST00000264052 TRIM41Q8WV44 630 aa16.03■□□□□ 0.16
SP100-201ENST00000264052 NEUROD1Q13562 356 aa16.03■□□□□ 0.16
SP100-201ENST00000264052 YTHDC1Q96MU7 727 aaKnown RBP16.02■□□□□ 0.16
SP100-201ENST00000264052 GTF3C3Q9Y5Q9 886 aa16■□□□□ 0.15
SP100-201ENST00000264052 CCER1Q8TC90 406 aaPredicted RBP16■□□□□ 0.15
SP100-201ENST00000264052 ZCCHC6Q5VYS8 1495 aaKnown RBP15.98■□□□□ 0.15
SP100-201ENST00000264052 ACIN1Q9UKV3 1341 aaKnown RBP15.91■□□□□ 0.14
SP100-201ENST00000264052 CCDC180Q9P1Z9 1646 aa15.85■□□□□ 0.13
SP100-201ENST00000264052 DIEXFQ68CQ4 756 aaKnown RBP15.82■□□□□ 0.12
SP100-201ENST00000264052 CENPBP07199 599 aaPredicted RBP15.79■□□□□ 0.12
SP100-201ENST00000264052 RANGAP1P46060 587 aaPredicted RBP15.53■□□□□ 0.08
SP100-201ENST00000264052 HNRNPUL2Q1KMD3 747 aaKnown RBP15.49■□□□□ 0.07
SP100-201ENST00000264052 MIER1Q8N108 512 aa15.46■□□□□ 0.07
SP100-201ENST00000264052 MYT1Q01538 1121 aa15.44■□□□□ 0.06
SP100-201ENST00000264052 ZNF316A6NFI3 1004 aaPredicted RBP15.4■□□□□ 0.06
SP100-201ENST00000264052 UBTFP17480 764 aaKnown RBP15.39■□□□□ 0.05
SP100-201ENST00000264052 RB1CC1Q8TDY2 1594 aa15.37■□□□□ 0.05
SP100-201ENST00000264052 RSF1Q96T23 1441 aaPredicted RBP15.36■□□□□ 0.05
SP100-201ENST00000264052 SCRIBQ14160 1630 aa15.33■□□□□ 0.05
SP100-201ENST00000264052 BCANQ96GW7 911 aa15.28■□□□□ 0.04
SP100-201ENST00000264052 ABCC9O60706 1549 aa15.16■□□□□ 0.02
SP100-201ENST00000264052 CECR2Q9BXF3 1484 aa15.11■□□□□ 0.01
SP100-201ENST00000264052 ITGAEP38570 1179 aa15.09■□□□□ 0.01
SP100-201ENST00000264052 APLP2Q06481 763 aa15.08■□□□□ 0.01
SP100-201ENST00000264052 SUPT16HQ9Y5B9 1047 aaKnown RBP15.07■□□□□ 0
SP100-201ENST00000264052 CEP162Q5TB80 1403 aa15.06■□□□□ 0
SP100-201ENST00000264052 ABCC8Q09428 1581 aa15.01□□□□□ -0.01
SP100-201ENST00000264052 KCNH8Q96L42 1107 aa15.01□□□□□ -0.01
SP100-201ENST00000264052 SOGA1O94964 1423 aa15□□□□□ -0.01
SP100-201ENST00000264052 TSHZ2Q9NRE2 1034 aa14.97□□□□□ -0.01
SP100-201ENST00000264052 BCL11AQ9H165 835 aa14.96□□□□□ -0.01
SP100-201ENST00000264052 CCDC88BA6NC98 1476 aa14.96□□□□□ -0.01
SP100-201ENST00000264052 MROH2BQ7Z745 1585 aa14.96□□□□□ -0.01
SP100-201ENST00000264052 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.01
SP100-201ENST00000264052 WIZO95785 1651 aa14.93□□□□□ -0.02
SP100-201ENST00000264052 ANP32EQ9BTT0 268 aa14.92□□□□□ -0.02
SP100-201ENST00000264052 RUSC2Q8N2Y8 1516 aa14.92□□□□□ -0.02
SP100-201ENST00000264052 FKBP8Q14318 412 aa14.92□□□□□ -0.02
SP100-201ENST00000264052 HIRIP3Q9BW71 556 aaPredicted RBP14.91□□□□□ -0.02
SP100-201ENST00000264052 TRIM52Q96A61 297 aa14.83□□□□□ -0.03
SP100-201ENST00000264052 DDX10Q13206 875 aaKnown RBP14.79□□□□□ -0.04
SP100-201ENST00000264052 IRX6P78412 446 aaPredicted RBP14.79□□□□□ -0.04
SP100-201ENST00000264052 TNIKQ9UKE5 1360 aa14.78□□□□□ -0.04
SP100-201ENST00000264052 NEFLP07196 543 aa14.76□□□□□ -0.05
SP100-201ENST00000264052 WRNQ14191 1432 aaPredicted RBP eCLIP14.73□□□□□ -0.05
SP100-201ENST00000264052 ATP1B4Q9UN42 357 aaPredicted RBP14.71□□□□□ -0.05
SP100-201ENST00000264052 ERICH6Q7L0X2 663 aa14.71□□□□□ -0.05
SP100-201ENST00000264052 PABPN1Q86U42 306 aaKnown RBP eCLIP14.71□□□□□ -0.05
SP100-201ENST00000264052 CLIP1P30622 1438 aa14.7□□□□□ -0.06
SP100-201ENST00000264052 RBM19Q9Y4C8 960 aaKnown RBP14.68□□□□□ -0.06
SP100-201ENST00000264052 CNGB1Q14028 1251 aaPredicted RBP14.68□□□□□ -0.06
SP100-201ENST00000264052 KANK4Q5T7N3 995 aaPredicted RBP14.67□□□□□ -0.06
SP100-201ENST00000264052 GOLGA3Q08378 1498 aa14.64□□□□□ -0.07
SP100-201ENST00000264052 SIN3AQ96ST3 1273 aa14.63□□□□□ -0.07
SP100-201ENST00000264052 DHX57Q6P158 1386 aaKnown RBP14.6□□□□□ -0.07
SP100-201ENST00000264052 SENP3-EIF4A1A0A087X0R7 540 aa14.58□□□□□ -0.08
SP100-201ENST00000264052 FAM50AQ14320 339 aaKnown RBP14.57□□□□□ -0.08
SP100-201ENST00000264052 CLSPNQ9HAW4 1339 aa14.53□□□□□ -0.08
SP100-201ENST00000264052 MSH5O43196 834 aa14.52□□□□□ -0.09
SP100-201ENST00000264052 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
SP100-201ENST00000264052 VPS8Q8N3P4 1428 aa14.51□□□□□ -0.09
SP100-201ENST00000264052 NBR1Q14596 966 aa14.51□□□□□ -0.09
SP100-201ENST00000264052 RAPGEF2Q9Y4G8 1499 aa14.5□□□□□ -0.09
SP100-201ENST00000264052 P3H3Q8IVL6 736 aa14.5□□□□□ -0.09
SP100-201ENST00000264052 ANP32CO43423 234 aa14.49□□□□□ -0.09
SP100-201ENST00000264052 HNRNPUQ00839 825 aaKnown RBP eCLIP14.48□□□□□ -0.09
SP100-201ENST00000264052 CEP164Q9UPV0 1460 aa14.45□□□□□ -0.1
SP100-201ENST00000264052 CDK11AQ9UQ88 783 aaPredicted RBP14.44□□□□□ -0.1
SP100-201ENST00000264052 EEA1Q15075 1411 aa14.42□□□□□ -0.1
SP100-201ENST00000264052 SMARCA2P51531 1590 aa14.42□□□□□ -0.1
SP100-201ENST00000264052 EIF4G1Q04637 1599 aaKnown RBP14.42□□□□□ -0.1
SP100-201ENST00000264052 NACADO15069 1562 aa14.39□□□□□ -0.11
SP100-201ENST00000264052 TOP2AP11388 1531 aaKnown RBP14.38□□□□□ -0.11
SP100-201ENST00000264052 B4GALNT3Q6L9W6 998 aa14.37□□□□□ -0.11
SP100-201ENST00000264052 RAB3GAP2Q9H2M9 1393 aa14.37□□□□□ -0.11
SP100-201ENST00000264052 FAM9BQ8IZU0 186 aa14.35□□□□□ -0.11
SP100-201ENST00000264052 POLR3GLQ9BT43 218 aa14.35□□□□□ -0.11
SP100-201ENST00000264052 BAZ1BQ9UIG0 1483 aaKnown RBP14.35□□□□□ -0.11
SP100-201ENST00000264052 KIF21BO75037 1637 aa14.34□□□□□ -0.11
SP100-201ENST00000264052 RTN4Q9NQC3 1192 aaKnown RBP14.34□□□□□ -0.11
SP100-201ENST00000264052 DEKP35659 375 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms