RNA–Protein interactions for RNA: ENST00000264005.9

LCAT-201, Transcript of lecithin-cholesterol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCAT, Length 1,507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCAT-201ENST00000264005 NISCHQ9Y2I1 1504 aa43.14■■■■■ 4.5
LCAT-201ENST00000264005 CCDC180Q9P1Z9 1646 aa38.48■■■■□ 3.75
LCAT-201ENST00000264005 ABCC9O60706 1549 aa37.56■■■■□ 3.6
LCAT-201ENST00000264005 RB1CC1Q8TDY2 1594 aa36.17■■■■□ 3.38
LCAT-201ENST00000264005 NACADO15069 1562 aa36.11■■■■□ 3.37
LCAT-201ENST00000264005 DCAF8L2P0C7V8 631 aa35.98■■■■□ 3.35
LCAT-201ENST00000264005 ZCCHC6Q5VYS8 1495 aaKnown RBP35.93■■■■□ 3.34
LCAT-201ENST00000264005 MYO15BQ96JP2 1530 aa35.86■■■■□ 3.33
LCAT-201ENST00000264005 DCAF1Q9Y4B6 1507 aa35.7■■■■□ 3.31
LCAT-201ENST00000264005 UNC13AQ9UPW8 1703 aa35.51■■■■□ 3.27
LCAT-201ENST00000264005 BICRAQ9NZM4 1560 aa35.07■■■■□ 3.21
LCAT-201ENST00000264005 SCRIBQ14160 1630 aa35.06■■■■□ 3.2
LCAT-201ENST00000264005 PABPN1Q86U42 306 aaKnown RBP eCLIP35.03■■■■□ 3.25e-7■■■■□ 19.4
LCAT-201ENST00000264005 SHROOM4Q9ULL8 1493 aa34.68■■■■□ 3.14
LCAT-201ENST00000264005 DNAJC5BQ9UF47 199 aa34.43■■■■□ 3.1
LCAT-201ENST00000264005 EIF4G1Q04637 1599 aaKnown RBP34.15■■■■□ 3.06
LCAT-201ENST00000264005 CC2D2AQ9P2K1 1620 aa34.04■■■■□ 3.04
LCAT-201ENST00000264005 CECR2Q9BXF3 1484 aa33.75■■■□□ 2.99
LCAT-201ENST00000264005 SMARCA4P51532 1647 aa33.53■■■□□ 2.96
LCAT-201ENST00000264005 BAZ1AQ9NRL2 1556 aaPredicted RBP33.46■■■□□ 2.95
LCAT-201ENST00000264005 SMARCA2P51531 1590 aa33.29■■■□□ 2.92
LCAT-201ENST00000264005 ATAD2BQ9ULI0 1458 aa33.29■■■□□ 2.92
LCAT-201ENST00000264005 NCAPD3P42695 1498 aa33.26■■■□□ 2.91
LCAT-201ENST00000264005 MROH2BQ7Z745 1585 aa33.24■■■□□ 2.91
LCAT-201ENST00000264005 PEG3Q9GZU2 1588 aa33.19■■■□□ 2.9
LCAT-201ENST00000264005 HMGXB3Q12766 1538 aa33.15■■■□□ 2.9
LCAT-201ENST00000264005 BAZ1BQ9UIG0 1483 aaKnown RBP33.03■■■□□ 2.88
LCAT-201ENST00000264005 WIZO95785 1651 aa32.95■■■□□ 2.87
LCAT-201ENST00000264005 RSF1Q96T23 1441 aaPredicted RBP32.81■■■□□ 2.84
LCAT-201ENST00000264005 TOP2AP11388 1531 aaKnown RBP32.56■■■□□ 2.8
LCAT-201ENST00000264005 NESP48681 1621 aa32.5■■■□□ 2.79
LCAT-201ENST00000264005 LAMC3Q9Y6N6 1575 aa32.47■■■□□ 2.79
LCAT-201ENST00000264005 ERCC6Q03468 1493 aa32.38■■■□□ 2.77
LCAT-201ENST00000264005 CADPSQ9ULU8 1353 aa32.27■■■□□ 2.76
LCAT-201ENST00000264005 KIF21AQ7Z4S6 1674 aa32.25■■■□□ 2.75
LCAT-201ENST00000264005 PDS5BQ9NTI5 1447 aa32.18■■■□□ 2.74
LCAT-201ENST00000264005 CCDC88BA6NC98 1476 aa32.13■■■□□ 2.73
LCAT-201ENST00000264005 CFTRP13569 1480 aa32.1■■■□□ 2.73
LCAT-201ENST00000264005 THOC2Q8NI27 1593 aaKnown RBP32.09■■■□□ 2.73
LCAT-201ENST00000264005 PRDM2Q13029 1718 aa32.08■■■□□ 2.73
LCAT-201ENST00000264005 CUX2O14529 1486 aa32.06■■■□□ 2.72
LCAT-201ENST00000264005 FANCD2Q9BXW9 1451 aa31.94■■■□□ 2.7
LCAT-201ENST00000264005 CEP164Q9UPV0 1460 aa31.92■■■□□ 2.7
LCAT-201ENST00000264005 SUPT5HO00267 1087 aaKnown RBP31.92■■■□□ 2.7
LCAT-201ENST00000264005 MRC2Q9UBG0 1479 aa31.87■■■□□ 2.69
LCAT-201ENST00000264005 WDR62O43379 1518 aa31.8■■■□□ 2.68
LCAT-201ENST00000264005 URB2Q14146 1524 aaKnown RBP31.63■■■□□ 2.65
LCAT-201ENST00000264005 TOPBP1Q92547 1522 aa31.44■■■□□ 2.62
LCAT-201ENST00000264005 ABCC8Q09428 1581 aa31.44■■■□□ 2.62
LCAT-201ENST00000264005 DNMBPQ6XZF7 1577 aa31.44■■■□□ 2.62
LCAT-201ENST00000264005 IFT140Q96RY7 1462 aa31.24■■■□□ 2.59
LCAT-201ENST00000264005 CUX1P39880 1505 aa31.2■■■□□ 2.58
LCAT-201ENST00000264005 POLA1P09884 1462 aaPredicted RBP31.16■■■□□ 2.58
LCAT-201ENST00000264005 TARBP1Q13395 1621 aaKnown RBP31.15■■■□□ 2.58
LCAT-201ENST00000264005 ZNF608Q9ULD9 1512 aaPredicted RBP31.1■■■□□ 2.57
LCAT-201ENST00000264005 FGD5Q6ZNL6 1462 aa31.09■■■□□ 2.57
LCAT-201ENST00000264005 EIF4G3O43432 1585 aaKnown RBP31.05■■■□□ 2.56
LCAT-201ENST00000264005 DNAJC5Q9H3Z4 198 aa31.04■■■□□ 2.56
LCAT-201ENST00000264005 RAD54L2Q9Y4B4 1467 aa31.02■■■□□ 2.56
LCAT-201ENST00000264005 SOGA1O94964 1423 aa31.01■■■□□ 2.55
LCAT-201ENST00000264005 BIVM-ERCC5R4GMW8 1640 aa31■■■□□ 2.55
LCAT-201ENST00000264005 TOP2BQ02880 1626 aa30.96■■■□□ 2.55
LCAT-201ENST00000264005 WRNQ14191 1432 aaPredicted RBP eCLIP30.95■■■□□ 2.55
LCAT-201ENST00000264005 WDR97A6NE52 1622 aa30.95■■■□□ 2.55
LCAT-201ENST00000264005 SYNJ1O43426 1573 aa30.94■■■□□ 2.54
LCAT-201ENST00000264005 AQRO60306 1485 aaKnown RBP eCLIP30.9■■■□□ 2.542e-9■■■■■ 47.9
LCAT-201ENST00000264005 TDRD9Q8NDG6 1382 aaKnown RBP30.82■■■□□ 2.52
LCAT-201ENST00000264005 ABCA10Q8WWZ4 1543 aa30.78■■■□□ 2.52
LCAT-201ENST00000264005 PBRM1Q86U86 1689 aa30.75■■■□□ 2.51
LCAT-201ENST00000264005 CHD1O14646 1710 aa30.73■■■□□ 2.51
LCAT-201ENST00000264005 ABCA5Q8WWZ7 1642 aa30.73■■■□□ 2.51
LCAT-201ENST00000264005 GAPVD1Q14C86 1478 aa30.67■■■□□ 2.5
LCAT-201ENST00000264005 OSCARQ8IYS5 282 aa30.67■■■□□ 2.5
LCAT-201ENST00000264005 GRIN2BQ13224 1484 aa30.66■■■□□ 2.5
LCAT-201ENST00000264005 SNAPC4Q5SXM2 1469 aa30.64■■■□□ 2.5
LCAT-201ENST00000264005 MAGI1Q96QZ7 1491 aaPredicted RBP30.61■■■□□ 2.49
LCAT-201ENST00000264005 FBLN2P98095 1184 aa30.51■■■□□ 2.47
LCAT-201ENST00000264005 SYNJ2O15056 1496 aa30.48■■■□□ 2.47
LCAT-201ENST00000264005 ERICH3Q5RHP9 1530 aa30.43■■■□□ 2.46
LCAT-201ENST00000264005 ADAMTS12P58397 1594 aa30.43■■■□□ 2.46
LCAT-201ENST00000264005 CHMP7Q8WUX9 453 aaPredicted RBP30.42■■■□□ 2.46
LCAT-201ENST00000264005 KIF27Q86VH2 1401 aa30.3■■■□□ 2.44
LCAT-201ENST00000264005 CLASP1Q7Z460 1538 aa30.3■■■□□ 2.44
LCAT-201ENST00000264005 RIMBP3CA6NJZ7 1639 aa30.3■■■□□ 2.44
LCAT-201ENST00000264005 RIMBP3BA6NNM3 1639 aa30.3■■■□□ 2.44
LCAT-201ENST00000264005 RIMBP3Q9UFD9 1639 aa30.3■■■□□ 2.44
LCAT-201ENST00000264005 FHAD1B1AJZ9 1412 aa30.3■■■□□ 2.44
LCAT-201ENST00000264005 GRIN2AQ12879 1464 aa30.29■■■□□ 2.44
LCAT-201ENST00000264005 ARHGEF11O15085 1522 aa30.24■■■□□ 2.43
LCAT-201ENST00000264005 CUL7Q14999 1698 aa30.22■■■□□ 2.43
LCAT-201ENST00000264005 CEP170Q5SW79 1584 aa30.17■■■□□ 2.42
LCAT-201ENST00000264005 TRIM41Q8WV44 630 aa30.17■■■□□ 2.42
LCAT-201ENST00000264005 IGF1RP08069 1367 aa30.15■■■□□ 2.42
LCAT-201ENST00000264005 NUP160Q12769 1436 aa30.13■■■□□ 2.41
LCAT-201ENST00000264005 RUSC2Q8N2Y8 1516 aa30.03■■■□□ 2.4
LCAT-201ENST00000264005 SHROOM2Q13796 1616 aa30■■■□□ 2.39
LCAT-201ENST00000264005 CARMIL1Q5VZK9 1371 aa29.99■■■□□ 2.39
LCAT-201ENST00000264005 ARAP1Q96P48 1450 aa29.98■■■□□ 2.39
LCAT-201ENST00000264005 CYB5RLQ6IPT4 315 aa29.89■■■□□ 2.38
LCAT-201ENST00000264005 ERCC6L2Q5T890 1561 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms