RNA–Protein interactions for RNA: ENST00000263895.8

RND3-201, Transcript of Rho family GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RND3, Length 2,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RND3-201ENST00000263895 NISCHQ9Y2I1 1504 aa16.61■□□□□ 0.25
RND3-201ENST00000263895 CCDC180Q9P1Z9 1646 aa14.43□□□□□ -0.1
RND3-201ENST00000263895 ZCCHC6Q5VYS8 1495 aaKnown RBP13.98□□□□□ -0.17
RND3-201ENST00000263895 DCAF1Q9Y4B6 1507 aa13.71□□□□□ -0.22
RND3-201ENST00000263895 DCAF8L2P0C7V8 631 aa13.67□□□□□ -0.22
RND3-201ENST00000263895 SHROOM4Q9ULL8 1493 aa13.64□□□□□ -0.23
RND3-201ENST00000263895 ABCC9O60706 1549 aa13.61□□□□□ -0.23
RND3-201ENST00000263895 MYO15BQ96JP2 1530 aa13.5□□□□□ -0.25
RND3-201ENST00000263895 NACADO15069 1562 aa13.41□□□□□ -0.26
RND3-201ENST00000263895 SCRIBQ14160 1630 aa13.32□□□□□ -0.28
RND3-201ENST00000263895 RB1CC1Q8TDY2 1594 aa13.28□□□□□ -0.28
RND3-201ENST00000263895 SUPT5HO00267 1087 aaKnown RBP13.12□□□□□ -0.31
RND3-201ENST00000263895 UNC13AQ9UPW8 1703 aa13.1□□□□□ -0.31
RND3-201ENST00000263895 BICRAQ9NZM4 1560 aa12.94□□□□□ -0.34
RND3-201ENST00000263895 CECR2Q9BXF3 1484 aa12.94□□□□□ -0.34
RND3-201ENST00000263895 RSF1Q96T23 1441 aaPredicted RBP12.93□□□□□ -0.34
RND3-201ENST00000263895 MROH2BQ7Z745 1585 aa12.86□□□□□ -0.35
RND3-201ENST00000263895 PABPN1Q86U42 306 aaKnown RBP eCLIP12.85□□□□□ -0.35
RND3-201ENST00000263895 BAZ1AQ9NRL2 1556 aaPredicted RBP12.8□□□□□ -0.36
RND3-201ENST00000263895 WIZO95785 1651 aa12.77□□□□□ -0.36
RND3-201ENST00000263895 SMARCA4P51532 1647 aa12.76□□□□□ -0.37
RND3-201ENST00000263895 CHIC1Q5VXU3 224 aa12.61□□□□□ -0.39
RND3-201ENST00000263895 TOP2AP11388 1531 aaKnown RBP12.6□□□□□ -0.39
RND3-201ENST00000263895 PEG3Q9GZU2 1588 aa12.59□□□□□ -0.39
RND3-201ENST00000263895 ATAD2BQ9ULI0 1458 aa12.53□□□□□ -0.4
RND3-201ENST00000263895 EIF4G1Q04637 1599 aaKnown RBP12.52□□□□□ -0.41
RND3-201ENST00000263895 SMARCA2P51531 1590 aa12.51□□□□□ -0.41
RND3-201ENST00000263895 CCDC88BA6NC98 1476 aa12.49□□□□□ -0.41
RND3-201ENST00000263895 BAZ1BQ9UIG0 1483 aaKnown RBP12.44□□□□□ -0.42
RND3-201ENST00000263895 NCAPD3P42695 1498 aa12.38□□□□□ -0.43
RND3-201ENST00000263895 HMGXB3Q12766 1538 aa12.38□□□□□ -0.43
RND3-201ENST00000263895 CC2D2AQ9P2K1 1620 aa12.32□□□□□ -0.44
RND3-201ENST00000263895 TRIM41Q8WV44 630 aa12.3□□□□□ -0.44
RND3-201ENST00000263895 ABCC8Q09428 1581 aa12.28□□□□□ -0.44
RND3-201ENST00000263895 LOC105371045A0A1W2PR82 267 aa12.15□□□□□ -0.46
RND3-201ENST00000263895 CFTRP13569 1480 aa12.15□□□□□ -0.47
RND3-201ENST00000263895 WRNQ14191 1432 aaPredicted RBP eCLIP12.14□□□□□ -0.47
RND3-201ENST00000263895 SYNJ1O43426 1573 aa12.14□□□□□ -0.47
RND3-201ENST00000263895 FAM9AQ8IZU1 332 aaPredicted RBP12.12□□□□□ -0.47
RND3-201ENST00000263895 PRDM2Q13029 1718 aa12.1□□□□□ -0.47
RND3-201ENST00000263895 CADPSQ9ULU8 1353 aa12.07□□□□□ -0.48
RND3-201ENST00000263895 DNAJC5BQ9UF47 199 aa12.05□□□□□ -0.48
RND3-201ENST00000263895 SOGA1O94964 1423 aa12.05□□□□□ -0.48
RND3-201ENST00000263895 TOP2BQ02880 1626 aa12.05□□□□□ -0.48
RND3-201ENST00000263895 BIVM-ERCC5R4GMW8 1640 aa12.04□□□□□ -0.48
RND3-201ENST00000263895 RUSC2Q8N2Y8 1516 aa12.03□□□□□ -0.48
RND3-201ENST00000263895 CUX1P39880 1505 aa12.02□□□□□ -0.49
RND3-201ENST00000263895 NESP48681 1621 aa12□□□□□ -0.49
RND3-201ENST00000263895 EHMT2Q96KQ7 1210 aa11.97□□□□□ -0.49
RND3-201ENST00000263895 EEA1Q15075 1411 aa11.96□□□□□ -0.49
RND3-201ENST00000263895 FANCD2Q9BXW9 1451 aa11.96□□□□□ -0.5
RND3-201ENST00000263895 LAMC3Q9Y6N6 1575 aa11.95□□□□□ -0.5
RND3-201ENST00000263895 CSRNP3Q8WYN3 585 aa11.92□□□□□ -0.5
RND3-201ENST00000263895 FGD5Q6ZNL6 1462 aa11.86□□□□□ -0.51
RND3-201ENST00000263895 CEP164Q9UPV0 1460 aa11.86□□□□□ -0.51
RND3-201ENST00000263895 DNMBPQ6XZF7 1577 aa11.86□□□□□ -0.51
RND3-201ENST00000263895 KIF21BO75037 1637 aa11.85□□□□□ -0.51
RND3-201ENST00000263895 KIF21AQ7Z4S6 1674 aa11.85□□□□□ -0.51
RND3-201ENST00000263895 TOPBP1Q92547 1522 aa11.84□□□□□ -0.51
RND3-201ENST00000263895 GOLGA3Q08378 1498 aa11.83□□□□□ -0.51
RND3-201ENST00000263895 PDS5BQ9NTI5 1447 aa11.83□□□□□ -0.52
RND3-201ENST00000263895 URB2Q14146 1524 aaKnown RBP11.83□□□□□ -0.52
RND3-201ENST00000263895 KIF27Q86VH2 1401 aa11.81□□□□□ -0.52
RND3-201ENST00000263895 TNIKQ9UKE5 1360 aa11.81□□□□□ -0.52
RND3-201ENST00000263895 RAPGEF2Q9Y4G8 1499 aa11.8□□□□□ -0.52
RND3-201ENST00000263895 POLA1P09884 1462 aaPredicted RBP11.8□□□□□ -0.52
RND3-201ENST00000263895 CUX2O14529 1486 aa11.79□□□□□ -0.52
RND3-201ENST00000263895 PRXQ9BXM0 1461 aa11.78□□□□□ -0.52
RND3-201ENST00000263895 CEP162Q5TB80 1403 aa11.78□□□□□ -0.52
RND3-201ENST00000263895 RAD54L2Q9Y4B4 1467 aa11.77□□□□□ -0.53
RND3-201ENST00000263895 UBTFP17480 764 aaKnown RBP11.77□□□□□ -0.53
RND3-201ENST00000263895 ERICH3Q5RHP9 1530 aa11.75□□□□□ -0.53
RND3-201ENST00000263895 ABCA10Q8WWZ4 1543 aa11.74□□□□□ -0.53
RND3-201ENST00000263895 WDR97A6NE52 1622 aa11.73□□□□□ -0.53
RND3-201ENST00000263895 IGF1RP08069 1367 aa11.72□□□□□ -0.53
RND3-201ENST00000263895 MRC2Q9UBG0 1479 aa11.7□□□□□ -0.54
RND3-201ENST00000263895 TARBP1Q13395 1621 aaKnown RBP11.67□□□□□ -0.54
RND3-201ENST00000263895 ABCA5Q8WWZ7 1642 aa11.66□□□□□ -0.54
RND3-201ENST00000263895 CLIP1P30622 1438 aa11.65□□□□□ -0.54
RND3-201ENST00000263895 WDR62O43379 1518 aa11.65□□□□□ -0.54
RND3-201ENST00000263895 PCGF6Q9BYE7 350 aa11.65□□□□□ -0.54
RND3-201ENST00000263895 CARMIL1Q5VZK9 1371 aa11.65□□□□□ -0.54
RND3-201ENST00000263895 TDRD9Q8NDG6 1382 aaKnown RBP11.63□□□□□ -0.55
RND3-201ENST00000263895 THOC2Q8NI27 1593 aaKnown RBP11.62□□□□□ -0.55
RND3-201ENST00000263895 ERCC6Q03468 1493 aa11.62□□□□□ -0.55
RND3-201ENST00000263895 CUL7Q14999 1698 aa11.61□□□□□ -0.55
RND3-201ENST00000263895 GAPVD1Q14C86 1478 aa11.61□□□□□ -0.55
RND3-201ENST00000263895 RANGAP1P46060 587 aaPredicted RBP11.59□□□□□ -0.55
RND3-201ENST00000263895 TRIM26Q12899 539 aaPredicted RBP11.59□□□□□ -0.55
RND3-201ENST00000263895 PPARGC1BQ86YN6 1023 aaKnown RBP11.59□□□□□ -0.55
RND3-201ENST00000263895 PBRM1Q86U86 1689 aa11.57□□□□□ -0.56
RND3-201ENST00000263895 ARAP1Q96P48 1450 aa11.57□□□□□ -0.56
RND3-201ENST00000263895 VPS8Q8N3P4 1428 aa11.57□□□□□ -0.56
RND3-201ENST00000263895 IFT140Q96RY7 1462 aa11.56□□□□□ -0.56
RND3-201ENST00000263895 ZNF608Q9ULD9 1512 aaPredicted RBP11.55□□□□□ -0.56
RND3-201ENST00000263895 AQRO60306 1485 aaKnown RBP eCLIP11.55□□□□□ -0.56
RND3-201ENST00000263895 ARHGAP35Q9NRY4 1499 aa11.55□□□□□ -0.56
RND3-201ENST00000263895 CTTNBP2Q8WZ74 1663 aa11.52□□□□□ -0.57
RND3-201ENST00000263895 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
RND3-201ENST00000263895 ADAMTS12P58397 1594 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms