RNA–Protein interactions for RNA: ENST00000262139.9

WIPI1-201, Transcript of WD repeat domain, phosphoinositide interacting 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene WIPI1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI1-201ENST00000262139 NISCHQ9Y2I1 1504 aa32.83■■■□□ 2.85
WIPI1-201ENST00000262139 ABCC9O60706 1549 aa29.7■■■□□ 2.34
WIPI1-201ENST00000262139 CCDC180Q9P1Z9 1646 aa29.47■■■□□ 2.31
WIPI1-201ENST00000262139 RB1CC1Q8TDY2 1594 aa28.15■■■□□ 2.1
WIPI1-201ENST00000262139 DNAJC5BQ9UF47 199 aa27.99■■■□□ 2.07
WIPI1-201ENST00000262139 NACADO15069 1562 aa27.92■■■□□ 2.06
WIPI1-201ENST00000262139 DCAF8L2P0C7V8 631 aa27.88■■■□□ 2.05
WIPI1-201ENST00000262139 PABPN1Q86U42 306 aaKnown RBP eCLIP27.67■■■□□ 2.02
WIPI1-201ENST00000262139 UNC13AQ9UPW8 1703 aa27.48■■□□□ 1.99
WIPI1-201ENST00000262139 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
WIPI1-201ENST00000262139 BICRAQ9NZM4 1560 aa27.34■■□□□ 1.97
WIPI1-201ENST00000262139 ZCCHC6Q5VYS8 1495 aaKnown RBP27.18■■□□□ 1.94
WIPI1-201ENST00000262139 DCAF1Q9Y4B6 1507 aa27.07■■□□□ 1.92
WIPI1-201ENST00000262139 SHROOM4Q9ULL8 1493 aa26.92■■□□□ 1.9
WIPI1-201ENST00000262139 SCRIBQ14160 1630 aa26.91■■□□□ 1.9
WIPI1-201ENST00000262139 CC2D2AQ9P2K1 1620 aa26.78■■□□□ 1.88
WIPI1-201ENST00000262139 CECR2Q9BXF3 1484 aa26.75■■□□□ 1.87
WIPI1-201ENST00000262139 EIF4G1Q04637 1599 aaKnown RBP26.68■■□□□ 1.86
WIPI1-201ENST00000262139 NCAPD3P42695 1498 aa25.79■■□□□ 1.72
WIPI1-201ENST00000262139 DNAJC5Q9H3Z4 198 aa25.77■■□□□ 1.72
WIPI1-201ENST00000262139 ATAD2BQ9ULI0 1458 aa25.71■■□□□ 1.71
WIPI1-201ENST00000262139 ERCC6Q03468 1493 aa25.65■■□□□ 1.7
WIPI1-201ENST00000262139 SMARCA4P51532 1647 aa25.63■■□□□ 1.69
WIPI1-201ENST00000262139 SMARCA2P51531 1590 aa25.61■■□□□ 1.69
WIPI1-201ENST00000262139 CUX2O14529 1486 aa25.61■■□□□ 1.69
WIPI1-201ENST00000262139 HMGXB3Q12766 1538 aa25.57■■□□□ 1.68
WIPI1-201ENST00000262139 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
WIPI1-201ENST00000262139 NESP48681 1621 aa25.46■■□□□ 1.67
WIPI1-201ENST00000262139 BAZ1BQ9UIG0 1483 aaKnown RBP25.46■■□□□ 1.67
WIPI1-201ENST00000262139 PEG3Q9GZU2 1588 aa25.35■■□□□ 1.65
WIPI1-201ENST00000262139 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
WIPI1-201ENST00000262139 LAMC3Q9Y6N6 1575 aa25.21■■□□□ 1.63
WIPI1-201ENST00000262139 THOC2Q8NI27 1593 aaKnown RBP25.19■■□□□ 1.62
WIPI1-201ENST00000262139 PDS5BQ9NTI5 1447 aa25.11■■□□□ 1.61
WIPI1-201ENST00000262139 KIF21AQ7Z4S6 1674 aa25.09■■□□□ 1.61
WIPI1-201ENST00000262139 CADPSQ9ULU8 1353 aa25.03■■□□□ 1.6
WIPI1-201ENST00000262139 WIZO95785 1651 aa24.99■■□□□ 1.59
WIPI1-201ENST00000262139 MRC2Q9UBG0 1479 aa24.9■■□□□ 1.58
WIPI1-201ENST00000262139 WDR62O43379 1518 aa24.82■■□□□ 1.56
WIPI1-201ENST00000262139 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
WIPI1-201ENST00000262139 FANCD2Q9BXW9 1451 aa24.74■■□□□ 1.55
WIPI1-201ENST00000262139 RSF1Q96T23 1441 aaPredicted RBP24.74■■□□□ 1.55
WIPI1-201ENST00000262139 CFTRP13569 1480 aa24.69■■□□□ 1.54
WIPI1-201ENST00000262139 TOP2AP11388 1531 aaKnown RBP24.66■■□□□ 1.54
WIPI1-201ENST00000262139 TRIM41Q8WV44 630 aa24.65■■□□□ 1.54
WIPI1-201ENST00000262139 URB2Q14146 1524 aaKnown RBP24.54■■□□□ 1.52
WIPI1-201ENST00000262139 OSCARQ8IYS5 282 aa24.46■■□□□ 1.51
WIPI1-201ENST00000262139 CCDC88BA6NC98 1476 aa24.41■■□□□ 1.5
WIPI1-201ENST00000262139 PRDM2Q13029 1718 aa24.37■■□□□ 1.49
WIPI1-201ENST00000262139 IFT140Q96RY7 1462 aa24.28■■□□□ 1.48
WIPI1-201ENST00000262139 ZNF608Q9ULD9 1512 aaPredicted RBP24.28■■□□□ 1.48
WIPI1-201ENST00000262139 TOPBP1Q92547 1522 aa24.25■■□□□ 1.47
WIPI1-201ENST00000262139 ABCC8Q09428 1581 aa24.17■■□□□ 1.46
WIPI1-201ENST00000262139 DNMBPQ6XZF7 1577 aa24.14■■□□□ 1.45
WIPI1-201ENST00000262139 RIMBP3CA6NJZ7 1639 aa24.12■■□□□ 1.45
WIPI1-201ENST00000262139 RIMBP3BA6NNM3 1639 aa24.12■■□□□ 1.45
WIPI1-201ENST00000262139 RIMBP3Q9UFD9 1639 aa24.12■■□□□ 1.45
WIPI1-201ENST00000262139 EIF4G3O43432 1585 aaKnown RBP24.1■■□□□ 1.45
WIPI1-201ENST00000262139 AQRO60306 1485 aaKnown RBP eCLIP24.05■■□□□ 1.446e-6■■■■□ 23.2
WIPI1-201ENST00000262139 ARHGEF11O15085 1522 aa24.04■■□□□ 1.44
WIPI1-201ENST00000262139 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
WIPI1-201ENST00000262139 POLA1P09884 1462 aaPredicted RBP24■■□□□ 1.43
WIPI1-201ENST00000262139 FBLN2P98095 1184 aa23.96■■□□□ 1.43
WIPI1-201ENST00000262139 RAD54L2Q9Y4B4 1467 aa23.94■■□□□ 1.42
WIPI1-201ENST00000262139 CHD1O14646 1710 aa23.94■■□□□ 1.42
WIPI1-201ENST00000262139 CYB5RLQ6IPT4 315 aa23.92■■□□□ 1.42
WIPI1-201ENST00000262139 SOGA1O94964 1423 aa23.9■■□□□ 1.42
WIPI1-201ENST00000262139 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.42
WIPI1-201ENST00000262139 FGD5Q6ZNL6 1462 aa23.84■■□□□ 1.41
WIPI1-201ENST00000262139 ARAP1Q96P48 1450 aa23.8■■□□□ 1.4
WIPI1-201ENST00000262139 CUX1P39880 1505 aa23.79■■□□□ 1.4
WIPI1-201ENST00000262139 SNAPC4Q5SXM2 1469 aa23.79■■□□□ 1.4
WIPI1-201ENST00000262139 CHMP7Q8WUX9 453 aaPredicted RBP23.74■■□□□ 1.39
WIPI1-201ENST00000262139 WDR97A6NE52 1622 aa23.74■■□□□ 1.39
WIPI1-201ENST00000262139 TRHP20396 242 aaPredicted RBP23.72■■□□□ 1.39
WIPI1-201ENST00000262139 GRIN2BQ13224 1484 aa23.7■■□□□ 1.38
WIPI1-201ENST00000262139 MAGI1Q96QZ7 1491 aaPredicted RBP23.69■■□□□ 1.38
WIPI1-201ENST00000262139 CLASP1Q7Z460 1538 aa23.67■■□□□ 1.38
WIPI1-201ENST00000262139 SYNJ1O43426 1573 aa23.65■■□□□ 1.38
WIPI1-201ENST00000262139 SUPT5HO00267 1087 aaKnown RBP23.63■■□□□ 1.37
WIPI1-201ENST00000262139 SYNJ2O15056 1496 aa23.62■■□□□ 1.37
WIPI1-201ENST00000262139 GAPVD1Q14C86 1478 aa23.6■■□□□ 1.37
WIPI1-201ENST00000262139 PBRM1Q86U86 1689 aa23.56■■□□□ 1.36
WIPI1-201ENST00000262139 ABCA10Q8WWZ4 1543 aa23.54■■□□□ 1.36
WIPI1-201ENST00000262139 ABCA5Q8WWZ7 1642 aa23.5■■□□□ 1.35
WIPI1-201ENST00000262139 WRNQ14191 1432 aaPredicted RBP eCLIP23.43■■□□□ 1.34
WIPI1-201ENST00000262139 GRIN2AQ12879 1464 aa23.38■■□□□ 1.33
WIPI1-201ENST00000262139 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
WIPI1-201ENST00000262139 TOP2BQ02880 1626 aa23.35■■□□□ 1.33
WIPI1-201ENST00000262139 BIVM-ERCC5R4GMW8 1640 aa23.34■■□□□ 1.33
WIPI1-201ENST00000262139 ERCC6L2Q5T890 1561 aa23.32■■□□□ 1.32
WIPI1-201ENST00000262139 NUP160Q12769 1436 aa23.31■■□□□ 1.32
WIPI1-201ENST00000262139 CEP170Q5SW79 1584 aa23.3■■□□□ 1.32
WIPI1-201ENST00000262139 FHAD1B1AJZ9 1412 aa23.3■■□□□ 1.32
WIPI1-201ENST00000262139 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
WIPI1-201ENST00000262139 SHROOM2Q13796 1616 aa23.19■■□□□ 1.3
WIPI1-201ENST00000262139 PRG4Q92954 1404 aaPredicted RBP23.13■■□□□ 1.29
WIPI1-201ENST00000262139 AEBP2Q6ZN18 517 aaPredicted RBP23.12■■□□□ 1.29
WIPI1-201ENST00000262139 JPH4Q96JJ6 628 aa23.1■■□□□ 1.29
WIPI1-201ENST00000262139 RUSC2Q8N2Y8 1516 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms