RNA–Protein interactions for RNA: ENST00000261509.10

PALLD-201, Transcript of palladin, cytoskeletal associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PALLD, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALLD-201ENST00000261509 DCAF8L2P0C7V8 631 aa17.79■□□□□ 0.44
PALLD-201ENST00000261509 FAM9AQ8IZU1 332 aaPredicted RBP16.99■□□□□ 0.31
PALLD-201ENST00000261509 PELP1Q8IZL8 1130 aaKnown RBP16.51■□□□□ 0.23
PALLD-201ENST00000261509 APLP2Q06481 763 aa16.44■□□□□ 0.22
PALLD-201ENST00000261509 SUPT5HO00267 1087 aaKnown RBP16.23■□□□□ 0.19
PALLD-201ENST00000261509 NISCHQ9Y2I1 1504 aa16.2■□□□□ 0.18
PALLD-201ENST00000261509 EHMT2Q96KQ7 1210 aa15.82■□□□□ 0.12
PALLD-201ENST00000261509 SHROOM4Q9ULL8 1493 aa15.81■□□□□ 0.12
PALLD-201ENST00000261509 CCER1Q8TC90 406 aaPredicted RBP15.79■□□□□ 0.12
PALLD-201ENST00000261509 ATP1B4Q9UN42 357 aaPredicted RBP15.7■□□□□ 0.1
PALLD-201ENST00000261509 ERICH6Q7L0X2 663 aa15.63■□□□□ 0.09
PALLD-201ENST00000261509 MYT1LQ9UL68 1186 aa15.61■□□□□ 0.09
PALLD-201ENST00000261509 MYT1Q01538 1121 aa15.59■□□□□ 0.09
PALLD-201ENST00000261509 RANGAP1P46060 587 aaPredicted RBP15.43■□□□□ 0.06
PALLD-201ENST00000261509 UBTFP17480 764 aaKnown RBP15.31■□□□□ 0.04
PALLD-201ENST00000261509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.3■□□□□ 0.04
PALLD-201ENST00000261509 NEFLP07196 543 aa15.3■□□□□ 0.04
PALLD-201ENST00000261509 HNRNPUL2Q1KMD3 747 aaKnown RBP15.3■□□□□ 0.04
PALLD-201ENST00000261509 TTBK1Q5TCY1 1321 aaPredicted RBP15.3■□□□□ 0.04
PALLD-201ENST00000261509 TRIM41Q8WV44 630 aa15.27■□□□□ 0.03
PALLD-201ENST00000261509 ZEB1P37275 1124 aaPredicted RBP15.26■□□□□ 0.03
PALLD-201ENST00000261509 CENPBP07199 599 aaPredicted RBP15.25■□□□□ 0.03
PALLD-201ENST00000261509 DAXXQ9UER7 740 aaPredicted RBP15.14■□□□□ 0.01
PALLD-201ENST00000261509 PCGF6Q9BYE7 350 aa15.1■□□□□ 0.01
PALLD-201ENST00000261509 SLC4A1APQ9BWU0 796 aaKnown RBP15.04■□□□□ -0
PALLD-201ENST00000261509 CHIC1Q5VXU3 224 aa15.01□□□□□ -0.01
PALLD-201ENST00000261509 YTHDC1Q96MU7 727 aaKnown RBP14.94□□□□□ -0.02
PALLD-201ENST00000261509 POLR3GLQ9BT43 218 aa14.93□□□□□ -0.02
PALLD-201ENST00000261509 ZBTB47Q9UFB7 747 aaPredicted RBP14.8□□□□□ -0.04
PALLD-201ENST00000261509 ESF1Q9H501 851 aaKnown RBP14.76□□□□□ -0.05
PALLD-201ENST00000261509 BCANQ96GW7 911 aa14.76□□□□□ -0.05
PALLD-201ENST00000261509 NEFMP07197 916 aa14.72□□□□□ -0.05
PALLD-201ENST00000261509 ITGAEP38570 1179 aa14.7□□□□□ -0.06
PALLD-201ENST00000261509 ZNF316A6NFI3 1004 aaPredicted RBP14.68□□□□□ -0.06
PALLD-201ENST00000261509 CLSPNQ9HAW4 1339 aa14.68□□□□□ -0.06
PALLD-201ENST00000261509 SLC24A1O60721 1099 aa14.61□□□□□ -0.07
PALLD-201ENST00000261509 FBLN2P98095 1184 aa14.59□□□□□ -0.07
PALLD-201ENST00000261509 TRIM52Q96A61 297 aa14.58□□□□□ -0.08
PALLD-201ENST00000261509 NPM1P06748 294 aaKnown RBP eCLIP14.56□□□□□ -0.08
PALLD-201ENST00000261509 FAM50AQ14320 339 aaKnown RBP14.48□□□□□ -0.09
PALLD-201ENST00000261509 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
PALLD-201ENST00000261509 CNGB1Q14028 1251 aaPredicted RBP14.45□□□□□ -0.1
PALLD-201ENST00000261509 CANXP27824 592 aaKnown RBP14.42□□□□□ -0.1
PALLD-201ENST00000261509 CDK11AQ9UQ88 783 aaPredicted RBP14.41□□□□□ -0.1
PALLD-201ENST00000261509 RTL5Q5HYW3 569 aaPredicted RBP14.41□□□□□ -0.1
PALLD-201ENST00000261509 TRIM26Q12899 539 aaPredicted RBP14.37□□□□□ -0.11
PALLD-201ENST00000261509 ABCC9O60706 1549 aa14.34□□□□□ -0.11
PALLD-201ENST00000261509 PABPN1Q86U42 306 aaKnown RBP eCLIP14.33□□□□□ -0.12
PALLD-201ENST00000261509 PPARGC1BQ86YN6 1023 aaKnown RBP14.3□□□□□ -0.12
PALLD-201ENST00000261509 ZNF326Q5BKZ1 582 aaKnown RBP14.29□□□□□ -0.12
PALLD-201ENST00000261509 NPM2Q86SE8 214 aaKnown RBP14.25□□□□□ -0.13
PALLD-201ENST00000261509 PLPPR3Q6T4P5 718 aa14.23□□□□□ -0.13
PALLD-201ENST00000261509 CDK11BP21127 795 aaKnown RBP14.2□□□□□ -0.14
PALLD-201ENST00000261509 ANP32CO43423 234 aa14.17□□□□□ -0.14
PALLD-201ENST00000261509 SCAF1Q9H7N4 1312 aaKnown RBP14.17□□□□□ -0.14
PALLD-201ENST00000261509 CHGAP10645 457 aaKnown RBP14.17□□□□□ -0.14
PALLD-201ENST00000261509 ZNF777Q9ULD5 760 aaPredicted RBP14.16□□□□□ -0.14
PALLD-201ENST00000261509 NEUROD1Q13562 356 aa14.14□□□□□ -0.15
PALLD-201ENST00000261509 A0A0G2JS52 829 aa14.09□□□□□ -0.15
PALLD-201ENST00000261509 HAP1P54257 671 aaPredicted RBP14.09□□□□□ -0.15
PALLD-201ENST00000261509 BCL11AQ9H165 835 aa14.07□□□□□ -0.16
PALLD-201ENST00000261509 ANP32BQ92688 251 aaKnown RBP14.07□□□□□ -0.16
PALLD-201ENST00000261509 C14orf37Q86TY3 774 aa14.05□□□□□ -0.16
PALLD-201ENST00000261509 PPP1R15AO75807 674 aaPredicted RBP14.01□□□□□ -0.17
PALLD-201ENST00000261509 UPF2Q9HAU5 1272 aaKnown RBP13.98□□□□□ -0.17
PALLD-201ENST00000261509 ARID3CA6NKF2 412 aa13.97□□□□□ -0.17
PALLD-201ENST00000261509 HSP90AA1P07900 732 aaKnown RBP13.96□□□□□ -0.17
PALLD-201ENST00000261509 ARID4BQ4LE39 1312 aaPredicted RBP13.95□□□□□ -0.18
PALLD-201ENST00000261509 MYH16Q9H6N6 1097 aa13.92□□□□□ -0.18
PALLD-201ENST00000261509 CHMP7Q8WUX9 453 aaPredicted RBP13.92□□□□□ -0.18
PALLD-201ENST00000261509 HRCP23327 699 aa13.92□□□□□ -0.18
PALLD-201ENST00000261509 ACIN1Q9UKV3 1341 aaKnown RBP13.92□□□□□ -0.18
PALLD-201ENST00000261509 ZBTB7CA1YPR0 619 aa13.91□□□□□ -0.18
PALLD-201ENST00000261509 P3H3Q8IVL6 736 aa13.9□□□□□ -0.18
PALLD-201ENST00000261509 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.9□□□□□ -0.18
PALLD-201ENST00000261509 TSPY4P0CV99 314 aa13.89□□□□□ -0.19
PALLD-201ENST00000261509 TSPY10P0CW01 314 aa13.89□□□□□ -0.19
PALLD-201ENST00000261509 NPHP1O15259 732 aa13.88□□□□□ -0.19
PALLD-201ENST00000261509 ANP32AP39687 249 aaKnown RBP13.85□□□□□ -0.19
PALLD-201ENST00000261509 EIF5BO60841 1220 aaKnown RBP13.84□□□□□ -0.19
PALLD-201ENST00000261509 EIF4G2P78344 907 aaKnown RBP eCLIP13.83□□□□□ -0.2
PALLD-201ENST00000261509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.83□□□□□ -0.2
PALLD-201ENST00000261509 WDR43Q15061 677 aaKnown RBP eCLIP13.82□□□□□ -0.2
PALLD-201ENST00000261509 DIEXFQ68CQ4 756 aaKnown RBP13.82□□□□□ -0.2
PALLD-201ENST00000261509 TONSLQ96HA7 1378 aa13.8□□□□□ -0.2
PALLD-201ENST00000261509 HDGFP51858 240 aaKnown RBP13.79□□□□□ -0.2
PALLD-201ENST00000261509 GLIPR1L2Q4G1C9 344 aa13.77□□□□□ -0.21
PALLD-201ENST00000261509 LOC105371045A0A1W2PR82 267 aa13.75□□□□□ -0.21
PALLD-201ENST00000261509 TRHP20396 242 aaPredicted RBP13.75□□□□□ -0.21
PALLD-201ENST00000261509 ARXQ96QS3 562 aa13.72□□□□□ -0.21
PALLD-201ENST00000261509 CSRNP3Q8WYN3 585 aa13.72□□□□□ -0.21
PALLD-201ENST00000261509 CFAP53Q96M91 514 aa13.71□□□□□ -0.21
PALLD-201ENST00000261509 ERCC6Q03468 1493 aa13.7□□□□□ -0.22
PALLD-201ENST00000261509 NCLP19338 710 aaKnown RBP13.7□□□□□ -0.22
PALLD-201ENST00000261509 TMX4Q9H1E5 349 aaPredicted RBP13.7□□□□□ -0.22
PALLD-201ENST00000261509 CDCA8Q53HL2 280 aa13.7□□□□□ -0.22
PALLD-201ENST00000261509 PLEKHD1A6NEE1 506 aa13.68□□□□□ -0.22
PALLD-201ENST00000261509 CASC1Q6TDU7 716 aa13.68□□□□□ -0.22
PALLD-201ENST00000261509 ZRSR1Q15695 479 aaKnown RBP13.67□□□□□ -0.22
PALLD-201ENST00000261509 GOLGA2Q08379 1002 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms