RNA–Protein interactions for RNA: ENST00000256996.8

DDB2-201, Transcript of damage specific DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB2, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-201ENST00000256996 NISCHQ9Y2I1 1504 aa28■■■□□ 2.07
DDB2-201ENST00000256996 CCDC180Q9P1Z9 1646 aa24.42■■□□□ 1.5
DDB2-201ENST00000256996 ZCCHC6Q5VYS8 1495 aaKnown RBP23.48■■□□□ 1.35
DDB2-201ENST00000256996 ABCC9O60706 1549 aa23.29■■□□□ 1.32
DDB2-201ENST00000256996 DCAF8L2P0C7V8 631 aa23.19■■□□□ 1.3
DDB2-201ENST00000256996 DCAF1Q9Y4B6 1507 aa23.16■■□□□ 1.3
DDB2-201ENST00000256996 MYO15BQ96JP2 1530 aa22.96■■□□□ 1.27
DDB2-201ENST00000256996 NACADO15069 1562 aa22.84■■□□□ 1.25
DDB2-201ENST00000256996 SHROOM4Q9ULL8 1493 aa22.72■■□□□ 1.23
DDB2-201ENST00000256996 RB1CC1Q8TDY2 1594 aa22.66■■□□□ 1.22
DDB2-201ENST00000256996 SCRIBQ14160 1630 aa22.44■■□□□ 1.18
DDB2-201ENST00000256996 DNAJC5BQ9UF47 199 aa22.3■■□□□ 1.16
DDB2-201ENST00000256996 UNC13AQ9UPW8 1703 aa22.09■■□□□ 1.13
DDB2-201ENST00000256996 BICRAQ9NZM4 1560 aa21.99■■□□□ 1.11
DDB2-201ENST00000256996 PABPN1Q86U42 306 aaKnown RBP eCLIP21.96■■□□□ 1.11
DDB2-201ENST00000256996 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
DDB2-201ENST00000256996 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.08
DDB2-201ENST00000256996 RSF1Q96T23 1441 aaPredicted RBP21.68■■□□□ 1.06
DDB2-201ENST00000256996 BAZ1AQ9NRL2 1556 aaPredicted RBP21.62■■□□□ 1.05
DDB2-201ENST00000256996 MROH2BQ7Z745 1585 aa21.62■■□□□ 1.05
DDB2-201ENST00000256996 SMARCA4P51532 1647 aa21.52■■□□□ 1.04
DDB2-201ENST00000256996 WIZO95785 1651 aa21.38■■□□□ 1.01
DDB2-201ENST00000256996 EIF4G1Q04637 1599 aaKnown RBP21.34■■□□□ 1.01
DDB2-201ENST00000256996 PEG3Q9GZU2 1588 aa21.3■■□□□ 1
DDB2-201ENST00000256996 ATAD2BQ9ULI0 1458 aa21.25■□□□□ 0.99
DDB2-201ENST00000256996 SMARCA2P51531 1590 aa21.22■□□□□ 0.99
DDB2-201ENST00000256996 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
DDB2-201ENST00000256996 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
DDB2-201ENST00000256996 BAZ1BQ9UIG0 1483 aaKnown RBP21.11■□□□□ 0.97
DDB2-201ENST00000256996 CC2D2AQ9P2K1 1620 aa21.04■□□□□ 0.96
DDB2-201ENST00000256996 HMGXB3Q12766 1538 aa21.04■□□□□ 0.96
DDB2-201ENST00000256996 DNAJC5Q9H3Z4 198 aa21.03■□□□□ 0.96
DDB2-201ENST00000256996 CCDC88BA6NC98 1476 aa21■□□□□ 0.95
DDB2-201ENST00000256996 CHIC1Q5VXU3 224 aa20.81■□□□□ 0.92
DDB2-201ENST00000256996 CFTRP13569 1480 aa20.6■□□□□ 0.89
DDB2-201ENST00000256996 CADPSQ9ULU8 1353 aa20.57■□□□□ 0.88
DDB2-201ENST00000256996 TRIM41Q8WV44 630 aa20.53■□□□□ 0.88
DDB2-201ENST00000256996 ABCC8Q09428 1581 aa20.47■□□□□ 0.87
DDB2-201ENST00000256996 WRNQ14191 1432 aaPredicted RBP eCLIP20.41■□□□□ 0.86
DDB2-201ENST00000256996 NESP48681 1621 aa20.4■□□□□ 0.86
DDB2-201ENST00000256996 LAMC3Q9Y6N6 1575 aa20.37■□□□□ 0.85
DDB2-201ENST00000256996 PRDM2Q13029 1718 aa20.32■□□□□ 0.84
DDB2-201ENST00000256996 FANCD2Q9BXW9 1451 aa20.31■□□□□ 0.84
DDB2-201ENST00000256996 SYNJ1O43426 1573 aa20.28■□□□□ 0.84
DDB2-201ENST00000256996 PDS5BQ9NTI5 1447 aa20.27■□□□□ 0.83
DDB2-201ENST00000256996 PELP1Q8IZL8 1130 aaKnown RBP20.24■□□□□ 0.83
DDB2-201ENST00000256996 CUX2O14529 1486 aa20.23■□□□□ 0.83
DDB2-201ENST00000256996 TOP2BQ02880 1626 aa20.22■□□□□ 0.83
DDB2-201ENST00000256996 CUX1P39880 1505 aa20.22■□□□□ 0.83
DDB2-201ENST00000256996 CEP164Q9UPV0 1460 aa20.19■□□□□ 0.82
DDB2-201ENST00000256996 BIVM-ERCC5R4GMW8 1640 aa20.17■□□□□ 0.82
DDB2-201ENST00000256996 HRCP23327 699 aa20.13■□□□□ 0.81
DDB2-201ENST00000256996 FAM9AQ8IZU1 332 aaPredicted RBP20.12■□□□□ 0.81
DDB2-201ENST00000256996 SOGA1O94964 1423 aa20.1■□□□□ 0.81
DDB2-201ENST00000256996 DNMBPQ6XZF7 1577 aa20.07■□□□□ 0.8
DDB2-201ENST00000256996 KIF21AQ7Z4S6 1674 aa20.07■□□□□ 0.8
DDB2-201ENST00000256996 TOPBP1Q92547 1522 aa20.06■□□□□ 0.8
DDB2-201ENST00000256996 URB2Q14146 1524 aaKnown RBP20.06■□□□□ 0.8
DDB2-201ENST00000256996 ERCC6Q03468 1493 aa20.05■□□□□ 0.8
DDB2-201ENST00000256996 EEA1Q15075 1411 aa20.03■□□□□ 0.8
DDB2-201ENST00000256996 FGD5Q6ZNL6 1462 aa20.02■□□□□ 0.8
DDB2-201ENST00000256996 RUSC2Q8N2Y8 1516 aa20.01■□□□□ 0.79
DDB2-201ENST00000256996 LOC105371045A0A1W2PR82 267 aa19.99■□□□□ 0.79
DDB2-201ENST00000256996 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
DDB2-201ENST00000256996 POLA1P09884 1462 aaPredicted RBP19.97■□□□□ 0.79
DDB2-201ENST00000256996 CSRNP3Q8WYN3 585 aa19.96■□□□□ 0.79
DDB2-201ENST00000256996 KIF27Q86VH2 1401 aa19.91■□□□□ 0.78
DDB2-201ENST00000256996 RAD54L2Q9Y4B4 1467 aa19.89■□□□□ 0.77
DDB2-201ENST00000256996 WDR62O43379 1518 aa19.88■□□□□ 0.77
DDB2-201ENST00000256996 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
DDB2-201ENST00000256996 THOC2Q8NI27 1593 aaKnown RBP19.82■□□□□ 0.76
DDB2-201ENST00000256996 EHMT2Q96KQ7 1210 aa19.82■□□□□ 0.76
DDB2-201ENST00000256996 PCGF6Q9BYE7 350 aa19.81■□□□□ 0.76
DDB2-201ENST00000256996 IGF1RP08069 1367 aa19.77■□□□□ 0.76
DDB2-201ENST00000256996 TARBP1Q13395 1621 aaKnown RBP19.76■□□□□ 0.75
DDB2-201ENST00000256996 TDRD9Q8NDG6 1382 aaKnown RBP19.74■□□□□ 0.75
DDB2-201ENST00000256996 MYT1Q01538 1121 aa19.74■□□□□ 0.75
DDB2-201ENST00000256996 PRXQ9BXM0 1461 aa19.74■□□□□ 0.75
DDB2-201ENST00000256996 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
DDB2-201ENST00000256996 GOLGA3Q08378 1498 aa19.73■□□□□ 0.75
DDB2-201ENST00000256996 WDR97A6NE52 1622 aa19.72■□□□□ 0.75
DDB2-201ENST00000256996 KIF21BO75037 1637 aa19.72■□□□□ 0.75
DDB2-201ENST00000256996 RAPGEF2Q9Y4G8 1499 aa19.69■□□□□ 0.74
DDB2-201ENST00000256996 GAPVD1Q14C86 1478 aa19.68■□□□□ 0.74
DDB2-201ENST00000256996 UBTFP17480 764 aaKnown RBP19.68■□□□□ 0.74
DDB2-201ENST00000256996 ABCA5Q8WWZ7 1642 aa19.67■□□□□ 0.74
DDB2-201ENST00000256996 TNIKQ9UKE5 1360 aa19.66■□□□□ 0.74
DDB2-201ENST00000256996 CARMIL1Q5VZK9 1371 aa19.65■□□□□ 0.74
DDB2-201ENST00000256996 ERICH3Q5RHP9 1530 aa19.65■□□□□ 0.74
DDB2-201ENST00000256996 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.731e-7■■■■■ 29.2
DDB2-201ENST00000256996 ZNF608Q9ULD9 1512 aaPredicted RBP19.62■□□□□ 0.73
DDB2-201ENST00000256996 PPARGC1BQ86YN6 1023 aaKnown RBP19.58■□□□□ 0.73
DDB2-201ENST00000256996 GRIN2BQ13224 1484 aa19.56■□□□□ 0.72
DDB2-201ENST00000256996 CUL7Q14999 1698 aa19.54■□□□□ 0.72
DDB2-201ENST00000256996 CEP162Q5TB80 1403 aa19.52■□□□□ 0.72
DDB2-201ENST00000256996 EIF4G3O43432 1585 aaKnown RBP19.5■□□□□ 0.71
DDB2-201ENST00000256996 FHAD1B1AJZ9 1412 aa19.48■□□□□ 0.71
DDB2-201ENST00000256996 PBRM1Q86U86 1689 aa19.47■□□□□ 0.71
DDB2-201ENST00000256996 CLIP1P30622 1438 aa19.42■□□□□ 0.7
DDB2-201ENST00000256996 ADAMTS12P58397 1594 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms