RNA–Protein interactions for RNA: ENST00000254661.4

RAMP1-201, Transcript of receptor activity modifying protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAMP1, Length 910 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP1-201ENST00000254661 NISCHQ9Y2I1 1504 aa42.83■■■■■ 4.45
RAMP1-201ENST00000254661 ABCC9O60706 1549 aa39.09■■■■□ 3.85
RAMP1-201ENST00000254661 CCDC180Q9P1Z9 1646 aa38.51■■■■□ 3.76
RAMP1-201ENST00000254661 DNAJC5BQ9UF47 199 aa37.14■■■■□ 3.54
RAMP1-201ENST00000254661 RB1CC1Q8TDY2 1594 aa36.9■■■■□ 3.5
RAMP1-201ENST00000254661 NACADO15069 1562 aa36.53■■■■□ 3.44
RAMP1-201ENST00000254661 DCAF8L2P0C7V8 631 aa36.45■■■■□ 3.43
RAMP1-201ENST00000254661 PABPN1Q86U42 306 aaKnown RBP eCLIP36.4■■■■□ 3.42
RAMP1-201ENST00000254661 UNC13AQ9UPW8 1703 aa36.1■■■■□ 3.37
RAMP1-201ENST00000254661 BICRAQ9NZM4 1560 aa35.93■■■■□ 3.34
RAMP1-201ENST00000254661 MYO15BQ96JP2 1530 aa35.85■■■■□ 3.33
RAMP1-201ENST00000254661 ZCCHC6Q5VYS8 1495 aaKnown RBP35.4■■■■□ 3.26
RAMP1-201ENST00000254661 DCAF1Q9Y4B6 1507 aa35.27■■■■□ 3.24
RAMP1-201ENST00000254661 CC2D2AQ9P2K1 1620 aa35.24■■■■□ 3.23
RAMP1-201ENST00000254661 SHROOM4Q9ULL8 1493 aa35.23■■■■□ 3.23
RAMP1-201ENST00000254661 CECR2Q9BXF3 1484 aa35.22■■■■□ 3.23
RAMP1-201ENST00000254661 SCRIBQ14160 1630 aa35.2■■■■□ 3.23
RAMP1-201ENST00000254661 EIF4G1Q04637 1599 aaKnown RBP35.04■■■■□ 3.2
RAMP1-201ENST00000254661 DNAJC5Q9H3Z4 198 aa34.3■■■■□ 3.08
RAMP1-201ENST00000254661 NCAPD3P42695 1498 aa33.78■■■■□ 3
RAMP1-201ENST00000254661 CUX2O14529 1486 aa33.75■■■□□ 2.99
RAMP1-201ENST00000254661 ERCC6Q03468 1493 aa33.72■■■□□ 2.99
RAMP1-201ENST00000254661 ATAD2BQ9ULI0 1458 aa33.65■■■□□ 2.98
RAMP1-201ENST00000254661 NESP48681 1621 aa33.5■■■□□ 2.95
RAMP1-201ENST00000254661 SMARCA4P51532 1647 aa33.49■■■□□ 2.95
RAMP1-201ENST00000254661 SMARCA2P51531 1590 aa33.46■■■□□ 2.95
RAMP1-201ENST00000254661 HMGXB3Q12766 1538 aa33.45■■■□□ 2.95
RAMP1-201ENST00000254661 BAZ1BQ9UIG0 1483 aaKnown RBP33.28■■■□□ 2.92
RAMP1-201ENST00000254661 BAZ1AQ9NRL2 1556 aaPredicted RBP33.22■■■□□ 2.91
RAMP1-201ENST00000254661 THOC2Q8NI27 1593 aaKnown RBP33.14■■■□□ 2.9
RAMP1-201ENST00000254661 PEG3Q9GZU2 1588 aa33.12■■■□□ 2.89
RAMP1-201ENST00000254661 MROH2BQ7Z745 1585 aa33.05■■■□□ 2.88
RAMP1-201ENST00000254661 LAMC3Q9Y6N6 1575 aa33.04■■■□□ 2.88
RAMP1-201ENST00000254661 KIF21AQ7Z4S6 1674 aa32.95■■■□□ 2.87
RAMP1-201ENST00000254661 PDS5BQ9NTI5 1447 aa32.89■■■□□ 2.86
RAMP1-201ENST00000254661 CADPSQ9ULU8 1353 aa32.76■■■□□ 2.83
RAMP1-201ENST00000254661 TRIM41Q8WV44 630 aa32.68■■■□□ 2.82
RAMP1-201ENST00000254661 MRC2Q9UBG0 1479 aa32.66■■■□□ 2.82
RAMP1-201ENST00000254661 WIZO95785 1651 aa32.62■■■□□ 2.81
RAMP1-201ENST00000254661 WDR62O43379 1518 aa32.57■■■□□ 2.8
RAMP1-201ENST00000254661 CEP164Q9UPV0 1460 aa32.44■■■□□ 2.78
RAMP1-201ENST00000254661 FANCD2Q9BXW9 1451 aa32.4■■■□□ 2.78
RAMP1-201ENST00000254661 CFTRP13569 1480 aa32.29■■■□□ 2.76
RAMP1-201ENST00000254661 RSF1Q96T23 1441 aaPredicted RBP32.21■■■□□ 2.75
RAMP1-201ENST00000254661 OSCARQ8IYS5 282 aa32.2■■■□□ 2.75
RAMP1-201ENST00000254661 URB2Q14146 1524 aaKnown RBP32.19■■■□□ 2.74
RAMP1-201ENST00000254661 TOP2AP11388 1531 aaKnown RBP32.12■■■□□ 2.73
RAMP1-201ENST00000254661 ZNF608Q9ULD9 1512 aaPredicted RBP31.89■■■□□ 2.7
RAMP1-201ENST00000254661 CCDC88BA6NC98 1476 aa31.83■■■□□ 2.69
RAMP1-201ENST00000254661 RIMBP3CA6NJZ7 1639 aa31.82■■■□□ 2.69
RAMP1-201ENST00000254661 RIMBP3BA6NNM3 1639 aa31.82■■■□□ 2.69
RAMP1-201ENST00000254661 RIMBP3Q9UFD9 1639 aa31.82■■■□□ 2.69
RAMP1-201ENST00000254661 PRDM2Q13029 1718 aa31.82■■■□□ 2.68
RAMP1-201ENST00000254661 IFT140Q96RY7 1462 aa31.79■■■□□ 2.68
RAMP1-201ENST00000254661 TOPBP1Q92547 1522 aa31.74■■■□□ 2.67
RAMP1-201ENST00000254661 ARHGEF11O15085 1522 aa31.69■■■□□ 2.66
RAMP1-201ENST00000254661 EIF4G3O43432 1585 aaKnown RBP31.61■■■□□ 2.65
RAMP1-201ENST00000254661 AQRO60306 1485 aaKnown RBP eCLIP31.54■■■□□ 2.64
RAMP1-201ENST00000254661 CYB5RLQ6IPT4 315 aa31.54■■■□□ 2.64
RAMP1-201ENST00000254661 DNMBPQ6XZF7 1577 aa31.54■■■□□ 2.64
RAMP1-201ENST00000254661 ABCC8Q09428 1581 aa31.53■■■□□ 2.64
RAMP1-201ENST00000254661 TARBP1Q13395 1621 aaKnown RBP31.47■■■□□ 2.63
RAMP1-201ENST00000254661 CHD1O14646 1710 aa31.46■■■□□ 2.63
RAMP1-201ENST00000254661 FBLN2P98095 1184 aa31.42■■■□□ 2.62
RAMP1-201ENST00000254661 POLA1P09884 1462 aaPredicted RBP31.39■■■□□ 2.62
RAMP1-201ENST00000254661 ARAP1Q96P48 1450 aa31.38■■■□□ 2.61
RAMP1-201ENST00000254661 RAD54L2Q9Y4B4 1467 aa31.34■■■□□ 2.61
RAMP1-201ENST00000254661 TRHP20396 242 aaPredicted RBP31.3■■■□□ 2.6
RAMP1-201ENST00000254661 TDRD9Q8NDG6 1382 aaKnown RBP31.29■■■□□ 2.6
RAMP1-201ENST00000254661 SOGA1O94964 1423 aa31.24■■■□□ 2.59
RAMP1-201ENST00000254661 SNAPC4Q5SXM2 1469 aa31.17■■■□□ 2.58
RAMP1-201ENST00000254661 FGD5Q6ZNL6 1462 aa31.14■■■□□ 2.58
RAMP1-201ENST00000254661 CLASP1Q7Z460 1538 aa31.09■■■□□ 2.57
RAMP1-201ENST00000254661 CHMP7Q8WUX9 453 aaPredicted RBP31.07■■■□□ 2.56
RAMP1-201ENST00000254661 CUX1P39880 1505 aa31.07■■■□□ 2.56
RAMP1-201ENST00000254661 MAGI1Q96QZ7 1491 aaPredicted RBP31■■■□□ 2.55
RAMP1-201ENST00000254661 WDR97A6NE52 1622 aa30.99■■■□□ 2.55
RAMP1-201ENST00000254661 GRIN2BQ13224 1484 aa30.99■■■□□ 2.55
RAMP1-201ENST00000254661 SYNJ1O43426 1573 aa30.98■■■□□ 2.55
RAMP1-201ENST00000254661 SYNJ2O15056 1496 aa30.93■■■□□ 2.54
RAMP1-201ENST00000254661 GAPVD1Q14C86 1478 aa30.84■■■□□ 2.53
RAMP1-201ENST00000254661 PBRM1Q86U86 1689 aa30.81■■■□□ 2.52
RAMP1-201ENST00000254661 ABCA10Q8WWZ4 1543 aa30.73■■■□□ 2.51
RAMP1-201ENST00000254661 ABCA5Q8WWZ7 1642 aa30.71■■■□□ 2.51
RAMP1-201ENST00000254661 ERCC6L2Q5T890 1561 aa30.66■■■□□ 2.5
RAMP1-201ENST00000254661 AEBP2Q6ZN18 517 aaPredicted RBP30.65■■■□□ 2.5
RAMP1-201ENST00000254661 GRIN2AQ12879 1464 aa30.6■■■□□ 2.49
RAMP1-201ENST00000254661 SUPT5HO00267 1087 aaKnown RBP30.55■■■□□ 2.48
RAMP1-201ENST00000254661 CEP170Q5SW79 1584 aa30.54■■■□□ 2.48
RAMP1-201ENST00000254661 WRNQ14191 1432 aaPredicted RBP eCLIP30.53■■■□□ 2.48
RAMP1-201ENST00000254661 NUP160Q12769 1436 aa30.52■■■□□ 2.48
RAMP1-201ENST00000254661 ADAMTS12P58397 1594 aa30.52■■■□□ 2.48
RAMP1-201ENST00000254661 FHAD1B1AJZ9 1412 aa30.42■■■□□ 2.46
RAMP1-201ENST00000254661 SHROOM2Q13796 1616 aa30.4■■■□□ 2.46
RAMP1-201ENST00000254661 TOP2BQ02880 1626 aa30.39■■■□□ 2.46
RAMP1-201ENST00000254661 BIVM-ERCC5R4GMW8 1640 aa30.38■■■□□ 2.45
RAMP1-201ENST00000254661 ERICH3Q5RHP9 1530 aa30.3■■■□□ 2.44
RAMP1-201ENST00000254661 PRG4Q92954 1404 aaPredicted RBP30.29■■■□□ 2.44
RAMP1-201ENST00000254661 JPH4Q96JJ6 628 aa30.24■■■□□ 2.43
RAMP1-201ENST00000254661 KIF13AQ9H1H9 1805 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms