RNA–Protein interactions for RNA: ENST00000253023.7

UBE2M-201, Transcript of ubiquitin conjugating enzyme E2 M, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2M, Length 1,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2M-201ENST00000253023 FTOQ9C0B1 505 aaKnown RBP eCLIP34.61■■■■□ 3.134e-24■□□□□ 8.3
UBE2M-201ENST00000253023 PABPC4Q13310 644 aaKnown RBP eCLIP35.63■■■■□ 3.295e-15■■■■■ 34.2
UBE2M-201ENST00000253023 RPS3P23396 243 aaKnown RBP eCLIP30.11■■■□□ 2.411e-14■■□□□ 13.9
UBE2M-201ENST00000253023 UPF1Q92900 1129 aaKnown RBP eCLIP39.86■■■■□ 3.974e-14■■■□□ 15.1
UBE2M-201ENST00000253023 PUM1Q14671 1186 aaKnown RBP eCLIP29.41■■■□□ 2.31e-11■□□□□ 10.6
UBE2M-201ENST00000253023 ZNF800Q2TB10 664 aaPredicted RBP eCLIP27.56■■■□□ 21e-10■□□□□ 10.6
UBE2M-201ENST00000253023 SUB1P53999 127 aaKnown RBP eCLIP23.78■■□□□ 1.43e-9■□□□□ 9
UBE2M-201ENST00000253023 DDX6P26196 483 aaKnown RBP eCLIP31.97■■■□□ 2.715e-9■■■■□ 20.8
UBE2M-201ENST00000253023 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP25.2■■□□□ 1.636e-9■■■■■ 31.5
UBE2M-201ENST00000253023 YBX3P16989 372 aaKnown RBP eCLIP37.82■■■■□ 3.657e-9■■□□□ 13.6
UBE2M-201ENST00000253023 ZNF622Q969S3 477 aaKnown RBP eCLIP38.19■■■■□ 3.71e-8■■□□□ 11.4
UBE2M-201ENST00000253023 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP47.53■■■■■ 5.21e-8■■■□□ 14.9
UBE2M-201ENST00000253023 BUD13Q9BRD0 619 aaKnown RBP eCLIP33.43■■■□□ 2.942e-8■■□□□ 12.3
UBE2M-201ENST00000253023 LARP4Q71RC2 724 aaKnown RBP eCLIP28.87■■■□□ 2.217e-8■■■■■ 32.1
UBE2M-201ENST00000253023 GRSF1Q12849 480 aaKnown RBP eCLIP31.3■■■□□ 2.69e-8■■□□□ 11.4
UBE2M-201ENST00000253023 DDX3XO00571 662 aaKnown RBP eCLIP32.22■■■□□ 2.751e-7■■■□□ 15.5
UBE2M-201ENST00000253023 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP31.95■■■□□ 2.711e-7■■■■□ 22.4
UBE2M-201ENST00000253023 AKAP1Q92667 903 aaKnown RBP eCLIP26.33■■□□□ 1.812e-7■■■□□ 16.6
UBE2M-201ENST00000253023 DDX24Q9GZR7 859 aaKnown RBP eCLIP37■■■■□ 3.512e-7■□□□□ 9.3
UBE2M-201ENST00000253023 PRPF4O43172 522 aaKnown RBP eCLIP29.5■■■□□ 2.312e-7■■■■■ 31.2
UBE2M-201ENST00000253023 LIN28BQ6ZN17 250 aaKnown RBP eCLIP33.38■■■□□ 2.932e-7■■■■□ 23.8
UBE2M-201ENST00000253023 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP32.56■■■□□ 2.83e-7■■□□□ 12.8
UBE2M-201ENST00000253023 METAP2P50579 478 aaKnown RBP eCLIP35.62■■■■□ 3.294e-7■□□□□ 10.1
UBE2M-201ENST00000253023 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP46.59■■■■■ 5.055e-7■■□□□ 12.2
UBE2M-201ENST00000253023 PPIGQ13427 754 aaKnown RBP eCLIP33.54■■■□□ 2.965e-7■□□□□ 9.9
UBE2M-201ENST00000253023 TIAL1Q01085 375 aaKnown RBP eCLIP29.98■■■□□ 2.395e-7■□□□□ 10.2
UBE2M-201ENST00000253023 EFTUD2Q15029 972 aaKnown RBP eCLIP30.14■■■□□ 2.427e-7■■■■□ 25.2
UBE2M-201ENST00000253023 DDX55Q8NHQ9 600 aaKnown RBP eCLIP36.2■■■■□ 3.398e-7■■□□□ 11.4
UBE2M-201ENST00000253023 SF3B1O75533 1304 aaKnown RBP eCLIP32.82■■■□□ 2.858e-7■■■■■ 56.1
UBE2M-201ENST00000253023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP45.62■■■■■ 4.899e-7■□□□□ 9.2
UBE2M-201ENST00000253023 AQRO60306 1485 aaKnown RBP eCLIP51.34■■■■■ 5.811e-6■■■■■ 29.4
UBE2M-201ENST00000253023 UTP3Q9NQZ2 479 aaKnown RBP eCLIP32.89■■■□□ 2.862e-6■■■■■ 38.3
UBE2M-201ENST00000253023 PCBP2Q15366 365 aaKnown RBP eCLIP29.45■■■□□ 2.32e-6■■■■■ 29.2
UBE2M-201ENST00000253023 GTF2F1P35269 517 aaKnown RBP eCLIP32.45■■■□□ 2.782e-6■■■■■ 36.4
UBE2M-201ENST00000253023 SERBP1Q8NC51 408 aaKnown RBP eCLIP30.35■■■□□ 2.453e-6■■■■■ 28.3
UBE2M-201ENST00000253023 SF3B4Q15427 424 aaKnown RBP eCLIP27.36■■□□□ 1.973e-6■■■■□ 22.8
UBE2M-201ENST00000253023 DHX30Q7L2E3 1194 aaKnown RBP eCLIP35.12■■■■□ 3.213e-6■■■□□ 17.4
UBE2M-201ENST00000253023 XPO5Q9HAV4 1204 aaKnown RBP eCLIP36.34■■■■□ 3.416e-6■■■□□ 15.9
UBE2M-201ENST00000253023 RBM22Q9NW64 420 aaKnown RBP eCLIP31.08■■■□□ 2.571e-5■■■■□ 22.7
Retrieved 39 of 39 RNA–protein pairs in 15.2 ms