RNA–Protein interactions for RNA: ENST00000252826.9

TRPM4-201, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPM4, Length 4,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-201ENST00000252826 NISCHQ9Y2I1 1504 aa27.11■■□□□ 1.93
TRPM4-201ENST00000252826 DCAF8L2P0C7V8 631 aa24.66■■□□□ 1.54
TRPM4-201ENST00000252826 SHROOM4Q9ULL8 1493 aa23.66■■□□□ 1.38
TRPM4-201ENST00000252826 ABCC9O60706 1549 aa23.14■■□□□ 1.3
TRPM4-201ENST00000252826 SUPT5HO00267 1087 aaKnown RBP23.11■■□□□ 1.29
TRPM4-201ENST00000252826 CCDC180Q9P1Z9 1646 aa23.01■■□□□ 1.27
TRPM4-201ENST00000252826 ZCCHC6Q5VYS8 1495 aaKnown RBP22.58■■□□□ 1.21
TRPM4-201ENST00000252826 PABPN1Q86U42 306 aaKnown RBP eCLIP22.32■■□□□ 1.16
TRPM4-201ENST00000252826 SCRIBQ14160 1630 aa22.1■■□□□ 1.13
TRPM4-201ENST00000252826 PELP1Q8IZL8 1130 aaKnown RBP21.95■■□□□ 1.1
TRPM4-201ENST00000252826 RB1CC1Q8TDY2 1594 aa21.9■■□□□ 1.1
TRPM4-201ENST00000252826 NACADO15069 1562 aa21.88■■□□□ 1.09
TRPM4-201ENST00000252826 DCAF1Q9Y4B6 1507 aa21.85■■□□□ 1.09
TRPM4-201ENST00000252826 EHMT2Q96KQ7 1210 aa21.71■■□□□ 1.07
TRPM4-201ENST00000252826 PCGF6Q9BYE7 350 aa21.69■■□□□ 1.06
TRPM4-201ENST00000252826 FAM9AQ8IZU1 332 aaPredicted RBP21.57■■□□□ 1.04
TRPM4-201ENST00000252826 MYO15BQ96JP2 1530 aa21.49■■□□□ 1.03
TRPM4-201ENST00000252826 TRIM41Q8WV44 630 aa21.47■■□□□ 1.03
TRPM4-201ENST00000252826 PPARGC1BQ86YN6 1023 aaKnown RBP21.44■■□□□ 1.02
TRPM4-201ENST00000252826 MYT1Q01538 1121 aa21.4■■□□□ 1.02
TRPM4-201ENST00000252826 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
TRPM4-201ENST00000252826 CHIC1Q5VXU3 224 aa21.33■■□□□ 1
TRPM4-201ENST00000252826 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
TRPM4-201ENST00000252826 HRCP23327 699 aa21.22■□□□□ 0.99
TRPM4-201ENST00000252826 MROH2BQ7Z745 1585 aa21.07■□□□□ 0.96
TRPM4-201ENST00000252826 BAZ1AQ9NRL2 1556 aaPredicted RBP21.02■□□□□ 0.96
TRPM4-201ENST00000252826 RANGAP1P46060 587 aaPredicted RBP21■□□□□ 0.95
TRPM4-201ENST00000252826 LOC105371045A0A1W2PR82 267 aa20.95■□□□□ 0.94
TRPM4-201ENST00000252826 UBTFP17480 764 aaKnown RBP20.86■□□□□ 0.93
TRPM4-201ENST00000252826 BAZ1BQ9UIG0 1483 aaKnown RBP20.85■□□□□ 0.93
TRPM4-201ENST00000252826 YTHDC1Q96MU7 727 aaKnown RBP20.85■□□□□ 0.93
TRPM4-201ENST00000252826 WIZO95785 1651 aa20.82■□□□□ 0.92
TRPM4-201ENST00000252826 CENPBP07199 599 aaPredicted RBP20.79■□□□□ 0.92
TRPM4-201ENST00000252826 TTBK1Q5TCY1 1321 aaPredicted RBP20.73■□□□□ 0.91
TRPM4-201ENST00000252826 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
TRPM4-201ENST00000252826 SMARCA4P51532 1647 aa20.72■□□□□ 0.91
TRPM4-201ENST00000252826 UNC13AQ9UPW8 1703 aa20.65■□□□□ 0.9
TRPM4-201ENST00000252826 ATAD2BQ9ULI0 1458 aa20.64■□□□□ 0.89
TRPM4-201ENST00000252826 CCDC88BA6NC98 1476 aa20.61■□□□□ 0.89
TRPM4-201ENST00000252826 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
TRPM4-201ENST00000252826 APLP2Q06481 763 aa20.54■□□□□ 0.88
TRPM4-201ENST00000252826 EIF4G1Q04637 1599 aaKnown RBP20.52■□□□□ 0.88
TRPM4-201ENST00000252826 TOP2AP11388 1531 aaKnown RBP20.51■□□□□ 0.87
TRPM4-201ENST00000252826 ATP1B4Q9UN42 357 aaPredicted RBP20.49■□□□□ 0.87
TRPM4-201ENST00000252826 GTF3C3Q9Y5Q9 886 aa20.49■□□□□ 0.87
TRPM4-201ENST00000252826 SCAF1Q9H7N4 1312 aaKnown RBP20.44■□□□□ 0.86
TRPM4-201ENST00000252826 CSRNP3Q8WYN3 585 aa20.42■□□□□ 0.86
TRPM4-201ENST00000252826 ERICH6Q7L0X2 663 aa20.37■□□□□ 0.85
TRPM4-201ENST00000252826 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
TRPM4-201ENST00000252826 ABCC8Q09428 1581 aa20.32■□□□□ 0.84
TRPM4-201ENST00000252826 NCAPD3P42695 1498 aa20.31■□□□□ 0.84
TRPM4-201ENST00000252826 DNAJC5BQ9UF47 199 aa20.29■□□□□ 0.84
TRPM4-201ENST00000252826 ZEB1P37275 1124 aaPredicted RBP20.28■□□□□ 0.84
TRPM4-201ENST00000252826 CCER1Q8TC90 406 aaPredicted RBP20.27■□□□□ 0.84
TRPM4-201ENST00000252826 FBLN2P98095 1184 aa20.27■□□□□ 0.84
TRPM4-201ENST00000252826 CC2D2AQ9P2K1 1620 aa20.26■□□□□ 0.83
TRPM4-201ENST00000252826 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
TRPM4-201ENST00000252826 SOGA1O94964 1423 aa20.12■□□□□ 0.81
TRPM4-201ENST00000252826 ERCC6Q03468 1493 aa20.11■□□□□ 0.81
TRPM4-201ENST00000252826 P3H3Q8IVL6 736 aa20.11■□□□□ 0.81
TRPM4-201ENST00000252826 ACIN1Q9UKV3 1341 aaKnown RBP20.06■□□□□ 0.8
TRPM4-201ENST00000252826 PDS5BQ9NTI5 1447 aa20.04■□□□□ 0.8
TRPM4-201ENST00000252826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.03■□□□□ 0.8
TRPM4-201ENST00000252826 HNRNPUL2Q1KMD3 747 aaKnown RBP20.03■□□□□ 0.8
TRPM4-201ENST00000252826 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
TRPM4-201ENST00000252826 TRIM26Q12899 539 aaPredicted RBP20.02■□□□□ 0.8
TRPM4-201ENST00000252826 NESP48681 1621 aa20.01■□□□□ 0.79
TRPM4-201ENST00000252826 NEUROD1Q13562 356 aa20■□□□□ 0.79
TRPM4-201ENST00000252826 FANCD2Q9BXW9 1451 aa19.97■□□□□ 0.79
TRPM4-201ENST00000252826 PEG3Q9GZU2 1588 aa19.96■□□□□ 0.79
TRPM4-201ENST00000252826 KIF27Q86VH2 1401 aa19.95■□□□□ 0.78
TRPM4-201ENST00000252826 CUX2O14529 1486 aa19.93■□□□□ 0.78
TRPM4-201ENST00000252826 EEA1Q15075 1411 aa19.91■□□□□ 0.78
TRPM4-201ENST00000252826 DIEXFQ68CQ4 756 aaKnown RBP19.91■□□□□ 0.78
TRPM4-201ENST00000252826 CFTRP13569 1480 aa19.9■□□□□ 0.78
TRPM4-201ENST00000252826 ARID3CA6NKF2 412 aa19.9■□□□□ 0.78
TRPM4-201ENST00000252826 TDRD9Q8NDG6 1382 aaKnown RBP19.89■□□□□ 0.78
TRPM4-201ENST00000252826 RUSC2Q8N2Y8 1516 aa19.89■□□□□ 0.78
TRPM4-201ENST00000252826 CEP164Q9UPV0 1460 aa19.89■□□□□ 0.77
TRPM4-201ENST00000252826 ITGAEP38570 1179 aa19.88■□□□□ 0.77
TRPM4-201ENST00000252826 BCL11AQ9H165 835 aa19.86■□□□□ 0.77
TRPM4-201ENST00000252826 CHMP7Q8WUX9 453 aaPredicted RBP19.86■□□□□ 0.77
TRPM4-201ENST00000252826 BCANQ96GW7 911 aa19.84■□□□□ 0.77
TRPM4-201ENST00000252826 GOLGA3Q08378 1498 aa19.81■□□□□ 0.76
TRPM4-201ENST00000252826 CARMIL1Q5VZK9 1371 aa19.76■□□□□ 0.75
TRPM4-201ENST00000252826 CLIP1P30622 1438 aa19.74■□□□□ 0.75
TRPM4-201ENST00000252826 CEP162Q5TB80 1403 aa19.74■□□□□ 0.75
TRPM4-201ENST00000252826 SYNJ1O43426 1573 aa19.73■□□□□ 0.75
TRPM4-201ENST00000252826 RAD54L2Q9Y4B4 1467 aa19.72■□□□□ 0.75
TRPM4-201ENST00000252826 FGD5Q6ZNL6 1462 aa19.72■□□□□ 0.75
TRPM4-201ENST00000252826 TNIKQ9UKE5 1360 aa19.7■□□□□ 0.74
TRPM4-201ENST00000252826 NEFLP07196 543 aa19.66■□□□□ 0.74
TRPM4-201ENST00000252826 CUX1P39880 1505 aa19.63■□□□□ 0.73
TRPM4-201ENST00000252826 FAM50AQ14320 339 aaKnown RBP19.62■□□□□ 0.73
TRPM4-201ENST00000252826 RAPGEF2Q9Y4G8 1499 aa19.61■□□□□ 0.73
TRPM4-201ENST00000252826 TOPBP1Q92547 1522 aa19.56■□□□□ 0.72
TRPM4-201ENST00000252826 IGF1RP08069 1367 aa19.54■□□□□ 0.72
TRPM4-201ENST00000252826 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
TRPM4-201ENST00000252826 AQRO60306 1485 aaKnown RBP eCLIP19.53■□□□□ 0.727e-7■■■■□ 25.1
TRPM4-201ENST00000252826 TOP2BQ02880 1626 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms