RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 NISCHQ9Y2I1 1504 aa39.09■■■■□ 3.85
PCCB-201ENST00000251654 CCDC180Q9P1Z9 1646 aa34.05■■■■□ 3.04
PCCB-201ENST00000251654 ZCCHC6Q5VYS8 1495 aaKnown RBP32.88■■■□□ 2.85
PCCB-201ENST00000251654 DCAF1Q9Y4B6 1507 aa32.32■■■□□ 2.77
PCCB-201ENST00000251654 DCAF8L2P0C7V8 631 aa32.12■■■□□ 2.73
PCCB-201ENST00000251654 ABCC9O60706 1549 aa32.06■■■□□ 2.72
PCCB-201ENST00000251654 SHROOM4Q9ULL8 1493 aa31.92■■■□□ 2.7
PCCB-201ENST00000251654 MYO15BQ96JP2 1530 aa31.9■■■□□ 2.7
PCCB-201ENST00000251654 NACADO15069 1562 aa31.65■■■□□ 2.66
PCCB-201ENST00000251654 RB1CC1Q8TDY2 1594 aa31.35■■■□□ 2.61
PCCB-201ENST00000251654 SCRIBQ14160 1630 aa31.32■■■□□ 2.6
PCCB-201ENST00000251654 UNC13AQ9UPW8 1703 aa30.83■■■□□ 2.53
PCCB-201ENST00000251654 SUPT5HO00267 1087 aaKnown RBP30.73■■■□□ 2.51
PCCB-201ENST00000251654 BICRAQ9NZM4 1560 aa30.47■■■□□ 2.47
PCCB-201ENST00000251654 CECR2Q9BXF3 1484 aa30.37■■■□□ 2.45
PCCB-201ENST00000251654 RSF1Q96T23 1441 aaPredicted RBP30.36■■■□□ 2.45
PCCB-201ENST00000251654 MROH2BQ7Z745 1585 aa30.22■■■□□ 2.43
PCCB-201ENST00000251654 PABPN1Q86U42 306 aaKnown RBP eCLIP30.21■■■□□ 2.43
PCCB-201ENST00000251654 BAZ1AQ9NRL2 1556 aaPredicted RBP30.16■■■□□ 2.42
PCCB-201ENST00000251654 SMARCA4P51532 1647 aa30.04■■■□□ 2.4
PCCB-201ENST00000251654 WIZO95785 1651 aa29.99■■■□□ 2.39
PCCB-201ENST00000251654 PEG3Q9GZU2 1588 aa29.69■■■□□ 2.34
PCCB-201ENST00000251654 TOP2AP11388 1531 aaKnown RBP29.65■■■□□ 2.34
PCCB-201ENST00000251654 EIF4G1Q04637 1599 aaKnown RBP29.51■■■□□ 2.31
PCCB-201ENST00000251654 CHIC1Q5VXU3 224 aa29.5■■■□□ 2.31
PCCB-201ENST00000251654 ATAD2BQ9ULI0 1458 aa29.49■■■□□ 2.31
PCCB-201ENST00000251654 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
PCCB-201ENST00000251654 CCDC88BA6NC98 1476 aa29.34■■■□□ 2.29
PCCB-201ENST00000251654 BAZ1BQ9UIG0 1483 aaKnown RBP29.32■■■□□ 2.28
PCCB-201ENST00000251654 HMGXB3Q12766 1538 aa29.21■■■□□ 2.27
PCCB-201ENST00000251654 NCAPD3P42695 1498 aa29.21■■■□□ 2.27
PCCB-201ENST00000251654 CC2D2AQ9P2K1 1620 aa29.04■■■□□ 2.24
PCCB-201ENST00000251654 TRIM41Q8WV44 630 aa28.87■■■□□ 2.21
PCCB-201ENST00000251654 ABCC8Q09428 1581 aa28.8■■■□□ 2.2
PCCB-201ENST00000251654 CFTRP13569 1480 aa28.61■■■□□ 2.17
PCCB-201ENST00000251654 WRNQ14191 1432 aaPredicted RBP eCLIP28.55■■■□□ 2.16
PCCB-201ENST00000251654 PRDM2Q13029 1718 aa28.52■■■□□ 2.16
PCCB-201ENST00000251654 SYNJ1O43426 1573 aa28.49■■■□□ 2.15
PCCB-201ENST00000251654 CADPSQ9ULU8 1353 aa28.45■■■□□ 2.14
PCCB-201ENST00000251654 LOC105371045A0A1W2PR82 267 aa28.37■■■□□ 2.13
PCCB-201ENST00000251654 TOP2BQ02880 1626 aa28.35■■■□□ 2.13
PCCB-201ENST00000251654 FAM9AQ8IZU1 332 aaPredicted RBP28.35■■■□□ 2.13
PCCB-201ENST00000251654 BIVM-ERCC5R4GMW8 1640 aa28.33■■■□□ 2.13
PCCB-201ENST00000251654 DNAJC5BQ9UF47 199 aa28.28■■■□□ 2.12
PCCB-201ENST00000251654 SOGA1O94964 1423 aa28.25■■■□□ 2.11
PCCB-201ENST00000251654 CUX1P39880 1505 aa28.25■■■□□ 2.11
PCCB-201ENST00000251654 LAMC3Q9Y6N6 1575 aa28.21■■■□□ 2.11
PCCB-201ENST00000251654 NESP48681 1621 aa28.21■■■□□ 2.11
PCCB-201ENST00000251654 EEA1Q15075 1411 aa28.18■■■□□ 2.1
PCCB-201ENST00000251654 FANCD2Q9BXW9 1451 aa28.15■■■□□ 2.1
PCCB-201ENST00000251654 RUSC2Q8N2Y8 1516 aa28.15■■■□□ 2.1
PCCB-201ENST00000251654 CSRNP3Q8WYN3 585 aa27.99■■■□□ 2.07
PCCB-201ENST00000251654 CEP164Q9UPV0 1460 aa27.96■■■□□ 2.07
PCCB-201ENST00000251654 EHMT2Q96KQ7 1210 aa27.95■■■□□ 2.06
PCCB-201ENST00000251654 DNMBPQ6XZF7 1577 aa27.94■■■□□ 2.06
PCCB-201ENST00000251654 PDS5BQ9NTI5 1447 aa27.94■■■□□ 2.06
PCCB-201ENST00000251654 KIF21AQ7Z4S6 1674 aa27.9■■■□□ 2.06
PCCB-201ENST00000251654 FGD5Q6ZNL6 1462 aa27.9■■■□□ 2.06
PCCB-201ENST00000251654 TOPBP1Q92547 1522 aa27.88■■■□□ 2.05
PCCB-201ENST00000251654 KIF21BO75037 1637 aa27.87■■■□□ 2.05
PCCB-201ENST00000251654 URB2Q14146 1524 aaKnown RBP27.83■■■□□ 2.05
PCCB-201ENST00000251654 GOLGA3Q08378 1498 aa27.82■■■□□ 2.04
PCCB-201ENST00000251654 KIF27Q86VH2 1401 aa27.8■■■□□ 2.04
PCCB-201ENST00000251654 POLA1P09884 1462 aaPredicted RBP27.77■■■□□ 2.04
PCCB-201ENST00000251654 TNIKQ9UKE5 1360 aa27.73■■■□□ 2.03
PCCB-201ENST00000251654 CUX2O14529 1486 aa27.72■■■□□ 2.03
PCCB-201ENST00000251654 PRXQ9BXM0 1461 aa27.69■■■□□ 2.02
PCCB-201ENST00000251654 RAPGEF2Q9Y4G8 1499 aa27.68■■■□□ 2.02
PCCB-201ENST00000251654 ERICH3Q5RHP9 1530 aa27.66■■■□□ 2.02
PCCB-201ENST00000251654 ABCA10Q8WWZ4 1543 aa27.66■■■□□ 2.02
PCCB-201ENST00000251654 RAD54L2Q9Y4B4 1467 aa27.65■■■□□ 2.02
PCCB-201ENST00000251654 CEP162Q5TB80 1403 aa27.63■■■□□ 2.01
PCCB-201ENST00000251654 WDR97A6NE52 1622 aa27.62■■■□□ 2.01
PCCB-201ENST00000251654 UBTFP17480 764 aaKnown RBP27.61■■■□□ 2.01
PCCB-201ENST00000251654 MRC2Q9UBG0 1479 aa27.6■■■□□ 2.01
PCCB-201ENST00000251654 IGF1RP08069 1367 aa27.56■■■□□ 2
PCCB-201ENST00000251654 TARBP1Q13395 1621 aaKnown RBP27.5■■□□□ 1.99
PCCB-201ENST00000251654 WDR62O43379 1518 aa27.49■■□□□ 1.99
PCCB-201ENST00000251654 ABCA5Q8WWZ7 1642 aa27.47■■□□□ 1.99
PCCB-201ENST00000251654 ERCC6Q03468 1493 aa27.44■■□□□ 1.98
PCCB-201ENST00000251654 THOC2Q8NI27 1593 aaKnown RBP27.41■■□□□ 1.98
PCCB-201ENST00000251654 CARMIL1Q5VZK9 1371 aa27.4■■□□□ 1.98
PCCB-201ENST00000251654 CUL7Q14999 1698 aa27.37■■□□□ 1.97
PCCB-201ENST00000251654 CLIP1P30622 1438 aa27.37■■□□□ 1.97
PCCB-201ENST00000251654 TDRD9Q8NDG6 1382 aaKnown RBP27.35■■□□□ 1.97
PCCB-201ENST00000251654 GAPVD1Q14C86 1478 aa27.34■■□□□ 1.97
PCCB-201ENST00000251654 IFT140Q96RY7 1462 aa27.27■■□□□ 1.96
PCCB-201ENST00000251654 PBRM1Q86U86 1689 aa27.23■■□□□ 1.95
PCCB-201ENST00000251654 AQRO60306 1485 aaKnown RBP eCLIP27.18■■□□□ 1.942e-6■■■■□ 22.2
PCCB-201ENST00000251654 PCGF6Q9BYE7 350 aa27.17■■□□□ 1.94
PCCB-201ENST00000251654 ZNF608Q9ULD9 1512 aaPredicted RBP27.17■■□□□ 1.94
PCCB-201ENST00000251654 VPS8Q8N3P4 1428 aa27.16■■□□□ 1.94
PCCB-201ENST00000251654 RANGAP1P46060 587 aaPredicted RBP27.13■■□□□ 1.93
PCCB-201ENST00000251654 TRIM26Q12899 539 aaPredicted RBP27.13■■□□□ 1.93
PCCB-201ENST00000251654 ARAP1Q96P48 1450 aa27.13■■□□□ 1.93
PCCB-201ENST00000251654 CTTNBP2Q8WZ74 1663 aa27.11■■□□□ 1.93
PCCB-201ENST00000251654 GRIN2BQ13224 1484 aa27.1■■□□□ 1.93
PCCB-201ENST00000251654 EIF4G3O43432 1585 aaKnown RBP27.1■■□□□ 1.93
PCCB-201ENST00000251654 ARHGAP35Q9NRY4 1499 aa27.1■■□□□ 1.93
PCCB-201ENST00000251654 ADAMTS12P58397 1594 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 380.5 ms