RNA–Protein interactions for RNA: ENST00000250092.10

CD68-201, Transcript of CD68 molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD68, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD68-201ENST00000250092 NISCHQ9Y2I1 1504 aa31.94■■■□□ 2.7
CD68-201ENST00000250092 CCDC180Q9P1Z9 1646 aa28.13■■■□□ 2.09
CD68-201ENST00000250092 ABCC9O60706 1549 aa27.29■■□□□ 1.96
CD68-201ENST00000250092 ZCCHC6Q5VYS8 1495 aaKnown RBP26.67■■□□□ 1.86
CD68-201ENST00000250092 DCAF8L2P0C7V8 631 aa26.62■■□□□ 1.85
CD68-201ENST00000250092 HRCP23327 699 aa26.51■■□□□ 1.83
CD68-201ENST00000250092 NACADO15069 1562 aa26.41■■□□□ 1.82
CD68-201ENST00000250092 DCAF1Q9Y4B6 1507 aa26.41■■□□□ 1.82
CD68-201ENST00000250092 MYO15BQ96JP2 1530 aa26.37■■□□□ 1.81
CD68-201ENST00000250092 RB1CC1Q8TDY2 1594 aa26.34■■□□□ 1.81
CD68-201ENST00000250092 PELP1Q8IZL8 1130 aaKnown RBP26.06■■□□□ 1.76
CD68-201ENST00000250092 SCRIBQ14160 1630 aa25.77■■□□□ 1.72
CD68-201ENST00000250092 UNC13AQ9UPW8 1703 aa25.74■■□□□ 1.71
CD68-201ENST00000250092 PABPN1Q86U42 306 aaKnown RBP eCLIP25.63■■□□□ 1.69
CD68-201ENST00000250092 SHROOM4Q9ULL8 1493 aa25.62■■□□□ 1.69
CD68-201ENST00000250092 SUPT5HO00267 1087 aaKnown RBP25.6■■□□□ 1.69
CD68-201ENST00000250092 PCGF6Q9BYE7 350 aa25.58■■□□□ 1.69
CD68-201ENST00000250092 BICRAQ9NZM4 1560 aa25.58■■□□□ 1.69
CD68-201ENST00000250092 CHIC1Q5VXU3 224 aa25.57■■□□□ 1.68
CD68-201ENST00000250092 PPARGC1BQ86YN6 1023 aaKnown RBP25.43■■□□□ 1.66
CD68-201ENST00000250092 MYT1Q01538 1121 aa25.24■■□□□ 1.63
CD68-201ENST00000250092 ZEB1P37275 1124 aaPredicted RBP25.21■■□□□ 1.63
CD68-201ENST00000250092 TRIM26Q12899 539 aaPredicted RBP25.13■■□□□ 1.61
CD68-201ENST00000250092 CECR2Q9BXF3 1484 aa24.89■■□□□ 1.57
CD68-201ENST00000250092 SCAF1Q9H7N4 1312 aaKnown RBP24.88■■□□□ 1.57
CD68-201ENST00000250092 EIF4G1Q04637 1599 aaKnown RBP24.85■■□□□ 1.57
CD68-201ENST00000250092 DNAJC5BQ9UF47 199 aa24.8■■□□□ 1.56
CD68-201ENST00000250092 BAZ1AQ9NRL2 1556 aaPredicted RBP24.69■■□□□ 1.54
CD68-201ENST00000250092 SMARCA4P51532 1647 aa24.67■■□□□ 1.54
CD68-201ENST00000250092 CC2D2AQ9P2K1 1620 aa24.66■■□□□ 1.54
CD68-201ENST00000250092 MROH2BQ7Z745 1585 aa24.64■■□□□ 1.54
CD68-201ENST00000250092 LOC105371045A0A1W2PR82 267 aa24.61■■□□□ 1.53
CD68-201ENST00000250092 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
CD68-201ENST00000250092 ATAD2BQ9ULI0 1458 aa24.49■■□□□ 1.51
CD68-201ENST00000250092 ACIN1Q9UKV3 1341 aaKnown RBP24.46■■□□□ 1.51
CD68-201ENST00000250092 SMARCA2P51531 1590 aa24.42■■□□□ 1.5
CD68-201ENST00000250092 PEG3Q9GZU2 1588 aa24.42■■□□□ 1.5
CD68-201ENST00000250092 NCAPD3P42695 1498 aa24.41■■□□□ 1.5
CD68-201ENST00000250092 WIZO95785 1651 aa24.37■■□□□ 1.49
CD68-201ENST00000250092 BAZ1BQ9UIG0 1483 aaKnown RBP24.28■■□□□ 1.48
CD68-201ENST00000250092 HMGXB3Q12766 1538 aa24.27■■□□□ 1.48
CD68-201ENST00000250092 CENPBP07199 599 aaPredicted RBP24.26■■□□□ 1.47
CD68-201ENST00000250092 NEUROD1Q13562 356 aa24.17■■□□□ 1.46
CD68-201ENST00000250092 TOP2AP11388 1531 aaKnown RBP24.11■■□□□ 1.45
CD68-201ENST00000250092 GTF3C3Q9Y5Q9 886 aa24.05■■□□□ 1.44
CD68-201ENST00000250092 TRIM41Q8WV44 630 aa23.94■■□□□ 1.42
CD68-201ENST00000250092 DIEXFQ68CQ4 756 aaKnown RBP23.92■■□□□ 1.42
CD68-201ENST00000250092 CCDC88BA6NC98 1476 aa23.89■■□□□ 1.41
CD68-201ENST00000250092 TTBK1Q5TCY1 1321 aaPredicted RBP23.8■■□□□ 1.4
CD68-201ENST00000250092 CCER1Q8TC90 406 aaPredicted RBP23.79■■□□□ 1.4
CD68-201ENST00000250092 NESP48681 1621 aa23.74■■□□□ 1.39
CD68-201ENST00000250092 CADPSQ9ULU8 1353 aa23.74■■□□□ 1.39
CD68-201ENST00000250092 WRNQ14191 1432 aaPredicted RBP eCLIP23.66■■□□□ 1.38
CD68-201ENST00000250092 CFTRP13569 1480 aa23.66■■□□□ 1.38
CD68-201ENST00000250092 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.66■■□□□ 1.38
CD68-201ENST00000250092 LAMC3Q9Y6N6 1575 aa23.65■■□□□ 1.38
CD68-201ENST00000250092 CLSPNQ9HAW4 1339 aa23.6■■□□□ 1.37
CD68-201ENST00000250092 ZNF316A6NFI3 1004 aaPredicted RBP23.56■■□□□ 1.36
CD68-201ENST00000250092 PDS5BQ9NTI5 1447 aa23.52■■□□□ 1.36
CD68-201ENST00000250092 FAM9AQ8IZU1 332 aaPredicted RBP23.52■■□□□ 1.36
CD68-201ENST00000250092 ERCC6Q03468 1493 aa23.45■■□□□ 1.34
CD68-201ENST00000250092 FANCD2Q9BXW9 1451 aa23.45■■□□□ 1.34
CD68-201ENST00000250092 KIF21AQ7Z4S6 1674 aa23.4■■□□□ 1.34
CD68-201ENST00000250092 PRDM2Q13029 1718 aa23.39■■□□□ 1.34
CD68-201ENST00000250092 CEP164Q9UPV0 1460 aa23.35■■□□□ 1.33
CD68-201ENST00000250092 MRC2Q9UBG0 1479 aa23.25■■□□□ 1.31
CD68-201ENST00000250092 THOC2Q8NI27 1593 aaKnown RBP23.22■■□□□ 1.31
CD68-201ENST00000250092 CEP162Q5TB80 1403 aa23.21■■□□□ 1.31
CD68-201ENST00000250092 TNIKQ9UKE5 1360 aa23.2■■□□□ 1.3
CD68-201ENST00000250092 URB2Q14146 1524 aaKnown RBP23.2■■□□□ 1.3
CD68-201ENST00000250092 MIER1Q8N108 512 aa23.19■■□□□ 1.3
CD68-201ENST00000250092 EEA1Q15075 1411 aa23.16■■□□□ 1.3
CD68-201ENST00000250092 YTHDC1Q96MU7 727 aaKnown RBP23.15■■□□□ 1.3
CD68-201ENST00000250092 WDR62O43379 1518 aa23.14■■□□□ 1.3
CD68-201ENST00000250092 ANP32EQ9BTT0 268 aa23.13■■□□□ 1.29
CD68-201ENST00000250092 ABCC8Q09428 1581 aa23.12■■□□□ 1.29
CD68-201ENST00000250092 TOPBP1Q92547 1522 aa23.11■■□□□ 1.29
CD68-201ENST00000250092 CUX1P39880 1505 aa23.09■■□□□ 1.29
CD68-201ENST00000250092 DNMBPQ6XZF7 1577 aa23.08■■□□□ 1.29
CD68-201ENST00000250092 EHMT2Q96KQ7 1210 aa23.08■■□□□ 1.29
CD68-201ENST00000250092 CUX2O14529 1486 aa23.04■■□□□ 1.28
CD68-201ENST00000250092 SUPT16HQ9Y5B9 1047 aaKnown RBP23.02■■□□□ 1.28
CD68-201ENST00000250092 SYNJ1O43426 1573 aa22.99■■□□□ 1.27
CD68-201ENST00000250092 BCL11AQ9H165 835 aa22.96■■□□□ 1.27
CD68-201ENST00000250092 POLA1P09884 1462 aaPredicted RBP22.95■■□□□ 1.26
CD68-201ENST00000250092 TOP2BQ02880 1626 aa22.95■■□□□ 1.26
CD68-201ENST00000250092 FGD5Q6ZNL6 1462 aa22.94■■□□□ 1.26
CD68-201ENST00000250092 BIVM-ERCC5R4GMW8 1640 aa22.93■■□□□ 1.26
CD68-201ENST00000250092 TSHZ2Q9NRE2 1034 aa22.92■■□□□ 1.26
CD68-201ENST00000250092 GOLGA3Q08378 1498 aa22.91■■□□□ 1.26
CD68-201ENST00000250092 RAD54L2Q9Y4B4 1467 aa22.88■■□□□ 1.25
CD68-201ENST00000250092 SOGA1O94964 1423 aa22.88■■□□□ 1.25
CD68-201ENST00000250092 IFT140Q96RY7 1462 aa22.85■■□□□ 1.25
CD68-201ENST00000250092 TARBP1Q13395 1621 aaKnown RBP22.81■■□□□ 1.24
CD68-201ENST00000250092 ZNF608Q9ULD9 1512 aaPredicted RBP22.77■■□□□ 1.24
CD68-201ENST00000250092 CSRNP3Q8WYN3 585 aa22.76■■□□□ 1.23
CD68-201ENST00000250092 KIF21BO75037 1637 aa22.75■■□□□ 1.23
CD68-201ENST00000250092 TDRD9Q8NDG6 1382 aaKnown RBP22.73■■□□□ 1.23
CD68-201ENST00000250092 ABCA10Q8WWZ4 1543 aa22.73■■□□□ 1.23
CD68-201ENST00000250092 AQRO60306 1485 aaKnown RBP eCLIP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms