RNA–Protein interactions for RNA: ENST00000245458.10

RPS29-201, Transcript of ribosomal protein S29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS29, Length 296 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29-201ENST00000245458 NISCHQ9Y2I1 1504 aa16.44■□□□□ 0.22
RPS29-201ENST00000245458 CCDC180Q9P1Z9 1646 aa14.77□□□□□ -0.04
RPS29-201ENST00000245458 ABCC9O60706 1549 aa14.34□□□□□ -0.11
RPS29-201ENST00000245458 MYO15BQ96JP2 1530 aa14□□□□□ -0.17
RPS29-201ENST00000245458 NACADO15069 1562 aa13.97□□□□□ -0.17
RPS29-201ENST00000245458 RB1CC1Q8TDY2 1594 aa13.96□□□□□ -0.17
RPS29-201ENST00000245458 DCAF1Q9Y4B6 1507 aa13.8□□□□□ -0.2
RPS29-201ENST00000245458 ZCCHC6Q5VYS8 1495 aaKnown RBP13.67□□□□□ -0.22
RPS29-201ENST00000245458 SHROOM4Q9ULL8 1493 aa13.66□□□□□ -0.22
RPS29-201ENST00000245458 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
RPS29-201ENST00000245458 BICRAQ9NZM4 1560 aa13.41□□□□□ -0.26
RPS29-201ENST00000245458 UNC13AQ9UPW8 1703 aa13.4□□□□□ -0.26
RPS29-201ENST00000245458 PABPN1Q86U42 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
RPS29-201ENST00000245458 DNAJC5BQ9UF47 199 aa13.28□□□□□ -0.28
RPS29-201ENST00000245458 SCRIBQ14160 1630 aa13.17□□□□□ -0.3
RPS29-201ENST00000245458 EIF4G1Q04637 1599 aaKnown RBP13.12□□□□□ -0.31
RPS29-201ENST00000245458 CC2D2AQ9P2K1 1620 aa13.05□□□□□ -0.32
RPS29-201ENST00000245458 CECR2Q9BXF3 1484 aa13.04□□□□□ -0.32
RPS29-201ENST00000245458 NCAPD3P42695 1498 aa12.9□□□□□ -0.34
RPS29-201ENST00000245458 SMARCA2P51531 1590 aa12.83□□□□□ -0.36
RPS29-201ENST00000245458 HMGXB3Q12766 1538 aa12.81□□□□□ -0.36
RPS29-201ENST00000245458 BAZ1AQ9NRL2 1556 aaPredicted RBP12.81□□□□□ -0.36
RPS29-201ENST00000245458 PEG3Q9GZU2 1588 aa12.79□□□□□ -0.36
RPS29-201ENST00000245458 ATAD2BQ9ULI0 1458 aa12.77□□□□□ -0.37
RPS29-201ENST00000245458 SMARCA4P51532 1647 aa12.74□□□□□ -0.37
RPS29-201ENST00000245458 BAZ1BQ9UIG0 1483 aaKnown RBP12.63□□□□□ -0.39
RPS29-201ENST00000245458 CUX2O14529 1486 aa12.59□□□□□ -0.39
RPS29-201ENST00000245458 LAMC3Q9Y6N6 1575 aa12.55□□□□□ -0.4
RPS29-201ENST00000245458 MROH2BQ7Z745 1585 aa12.54□□□□□ -0.4
RPS29-201ENST00000245458 PDS5BQ9NTI5 1447 aa12.5□□□□□ -0.41
RPS29-201ENST00000245458 ERCC6Q03468 1493 aa12.48□□□□□ -0.41
RPS29-201ENST00000245458 CADPSQ9ULU8 1353 aa12.45□□□□□ -0.42
RPS29-201ENST00000245458 RSF1Q96T23 1441 aaPredicted RBP12.42□□□□□ -0.42
RPS29-201ENST00000245458 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
RPS29-201ENST00000245458 CFTRP13569 1480 aa12.36□□□□□ -0.43
RPS29-201ENST00000245458 NESP48681 1621 aa12.33□□□□□ -0.44
RPS29-201ENST00000245458 WIZO95785 1651 aa12.32□□□□□ -0.44
RPS29-201ENST00000245458 DNAJC5Q9H3Z4 198 aa12.32□□□□□ -0.44
RPS29-201ENST00000245458 THOC2Q8NI27 1593 aaKnown RBP12.31□□□□□ -0.44
RPS29-201ENST00000245458 MRC2Q9UBG0 1479 aa12.28□□□□□ -0.44
RPS29-201ENST00000245458 WDR62O43379 1518 aa12.27□□□□□ -0.44
RPS29-201ENST00000245458 CEP164Q9UPV0 1460 aa12.26□□□□□ -0.45
RPS29-201ENST00000245458 FANCD2Q9BXW9 1451 aa12.23□□□□□ -0.45
RPS29-201ENST00000245458 ABCC8Q09428 1581 aa12.22□□□□□ -0.45
RPS29-201ENST00000245458 KIF21AQ7Z4S6 1674 aa12.19□□□□□ -0.46
RPS29-201ENST00000245458 CCDC88BA6NC98 1476 aa12.15□□□□□ -0.46
RPS29-201ENST00000245458 PRDM2Q13029 1718 aa12.15□□□□□ -0.46
RPS29-201ENST00000245458 IFT140Q96RY7 1462 aa12.07□□□□□ -0.48
RPS29-201ENST00000245458 URB2Q14146 1524 aaKnown RBP12.06□□□□□ -0.48
RPS29-201ENST00000245458 WDR97A6NE52 1622 aa12.03□□□□□ -0.48
RPS29-201ENST00000245458 DNMBPQ6XZF7 1577 aa12.01□□□□□ -0.49
RPS29-201ENST00000245458 TOPBP1Q92547 1522 aa12.01□□□□□ -0.49
RPS29-201ENST00000245458 OSCARQ8IYS5 282 aa11.97□□□□□ -0.49
RPS29-201ENST00000245458 POLA1P09884 1462 aaPredicted RBP11.89□□□□□ -0.51
RPS29-201ENST00000245458 TARBP1Q13395 1621 aaKnown RBP11.88□□□□□ -0.51
RPS29-201ENST00000245458 SOGA1O94964 1423 aa11.86□□□□□ -0.51
RPS29-201ENST00000245458 MAGI1Q96QZ7 1491 aaPredicted RBP11.83□□□□□ -0.52
RPS29-201ENST00000245458 ZNF608Q9ULD9 1512 aaPredicted RBP11.82□□□□□ -0.52
RPS29-201ENST00000245458 EIF4G3O43432 1585 aaKnown RBP11.82□□□□□ -0.52
RPS29-201ENST00000245458 ABCA10Q8WWZ4 1543 aa11.81□□□□□ -0.52
RPS29-201ENST00000245458 FGD5Q6ZNL6 1462 aa11.8□□□□□ -0.52
RPS29-201ENST00000245458 CUX1P39880 1505 aa11.8□□□□□ -0.52
RPS29-201ENST00000245458 GRIN2BQ13224 1484 aa11.79□□□□□ -0.52
RPS29-201ENST00000245458 WRNQ14191 1432 aaPredicted RBP eCLIP11.78□□□□□ -0.522e-7■□□□□ 9.9
RPS29-201ENST00000245458 AQRO60306 1485 aaKnown RBP eCLIP11.76□□□□□ -0.537e-11■■■■■ 26.9
RPS29-201ENST00000245458 SYNJ2O15056 1496 aa11.74□□□□□ -0.53
RPS29-201ENST00000245458 TOP2BQ02880 1626 aa11.74□□□□□ -0.53
RPS29-201ENST00000245458 SUPT5HO00267 1087 aaKnown RBP11.73□□□□□ -0.53
RPS29-201ENST00000245458 GAPVD1Q14C86 1478 aa11.73□□□□□ -0.53
RPS29-201ENST00000245458 BIVM-ERCC5R4GMW8 1640 aa11.71□□□□□ -0.53
RPS29-201ENST00000245458 RAD54L2Q9Y4B4 1467 aa11.71□□□□□ -0.53
RPS29-201ENST00000245458 SYNJ1O43426 1573 aa11.71□□□□□ -0.54
RPS29-201ENST00000245458 TDRD9Q8NDG6 1382 aaKnown RBP11.7□□□□□ -0.54
RPS29-201ENST00000245458 ERICH3Q5RHP9 1530 aa11.7□□□□□ -0.54
RPS29-201ENST00000245458 ABCA5Q8WWZ7 1642 aa11.69□□□□□ -0.54
RPS29-201ENST00000245458 CHMP7Q8WUX9 453 aaPredicted RBP11.69□□□□□ -0.54
RPS29-201ENST00000245458 ARHGEF11O15085 1522 aa11.69□□□□□ -0.54
RPS29-201ENST00000245458 SNAPC4Q5SXM2 1469 aa11.68□□□□□ -0.54
RPS29-201ENST00000245458 CLASP1Q7Z460 1538 aa11.65□□□□□ -0.54
RPS29-201ENST00000245458 FHAD1B1AJZ9 1412 aa11.64□□□□□ -0.55
RPS29-201ENST00000245458 RIMBP3CA6NJZ7 1639 aa11.64□□□□□ -0.55
RPS29-201ENST00000245458 RIMBP3BA6NNM3 1639 aa11.64□□□□□ -0.55
RPS29-201ENST00000245458 RIMBP3Q9UFD9 1639 aa11.64□□□□□ -0.55
RPS29-201ENST00000245458 CHD1O14646 1710 aa11.63□□□□□ -0.55
RPS29-201ENST00000245458 NUP160Q12769 1436 aa11.62□□□□□ -0.55
RPS29-201ENST00000245458 PBRM1Q86U86 1689 aa11.6□□□□□ -0.55
RPS29-201ENST00000245458 GRIN2AQ12879 1464 aa11.6□□□□□ -0.55
RPS29-201ENST00000245458 FBLN2P98095 1184 aa11.59□□□□□ -0.55
RPS29-201ENST00000245458 TRIM41Q8WV44 630 aa11.57□□□□□ -0.56
RPS29-201ENST00000245458 ADAMTS12P58397 1594 aa11.57□□□□□ -0.56
RPS29-201ENST00000245458 KIF27Q86VH2 1401 aa11.56□□□□□ -0.56
RPS29-201ENST00000245458 ARAP1Q96P48 1450 aa11.55□□□□□ -0.56
RPS29-201ENST00000245458 SHROOM2Q13796 1616 aa11.51□□□□□ -0.57
RPS29-201ENST00000245458 CYB5RLQ6IPT4 315 aa11.51□□□□□ -0.57
RPS29-201ENST00000245458 CUL7Q14999 1698 aa11.5□□□□□ -0.57
RPS29-201ENST00000245458 IGF1RP08069 1367 aa11.49□□□□□ -0.57
RPS29-201ENST00000245458 KIAA0586Q9BVV6 1533 aa11.47□□□□□ -0.57
RPS29-201ENST00000245458 CEP170Q5SW79 1584 aa11.45□□□□□ -0.58
RPS29-201ENST00000245458 JPH4Q96JJ6 628 aa11.44□□□□□ -0.58
RPS29-201ENST00000245458 CARMIL1Q5VZK9 1371 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms