RNA–Protein interactions for RNA: ENST00000245222.8

SPHK2-201, Transcript of sphingosine kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK2, Length 2,963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2-201ENST00000245222 NISCHQ9Y2I1 1504 aa29.17■■■□□ 2.26
SPHK2-201ENST00000245222 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
SPHK2-201ENST00000245222 ZCCHC6Q5VYS8 1495 aaKnown RBP24.61■■□□□ 1.53
SPHK2-201ENST00000245222 SHROOM4Q9ULL8 1493 aa24.52■■□□□ 1.52
SPHK2-201ENST00000245222 SUPT5HO00267 1087 aaKnown RBP24.16■■□□□ 1.46
SPHK2-201ENST00000245222 DCAF8L2P0C7V8 631 aa24.12■■□□□ 1.45
SPHK2-201ENST00000245222 ABCC9O60706 1549 aa23.99■■□□□ 1.43
SPHK2-201ENST00000245222 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
SPHK2-201ENST00000245222 MYO15BQ96JP2 1530 aa23.44■■□□□ 1.34
SPHK2-201ENST00000245222 CHIC1Q5VXU3 224 aa23.43■■□□□ 1.34
SPHK2-201ENST00000245222 HRCP23327 699 aa23.37■■□□□ 1.33
SPHK2-201ENST00000245222 NACADO15069 1562 aa23.36■■□□□ 1.33
SPHK2-201ENST00000245222 PCGF6Q9BYE7 350 aa23.33■■□□□ 1.33
SPHK2-201ENST00000245222 SCRIBQ14160 1630 aa23.3■■□□□ 1.32
SPHK2-201ENST00000245222 RB1CC1Q8TDY2 1594 aa23.27■■□□□ 1.32
SPHK2-201ENST00000245222 PPARGC1BQ86YN6 1023 aaKnown RBP23.16■■□□□ 1.3
SPHK2-201ENST00000245222 LOC105371045A0A1W2PR82 267 aa23.01■■□□□ 1.27
SPHK2-201ENST00000245222 RSF1Q96T23 1441 aaPredicted RBP22.95■■□□□ 1.27
SPHK2-201ENST00000245222 UNC13AQ9UPW8 1703 aa22.83■■□□□ 1.25
SPHK2-201ENST00000245222 CECR2Q9BXF3 1484 aa22.79■■□□□ 1.24
SPHK2-201ENST00000245222 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
SPHK2-201ENST00000245222 BICRAQ9NZM4 1560 aa22.62■■□□□ 1.21
SPHK2-201ENST00000245222 WIZO95785 1651 aa22.53■■□□□ 1.2
SPHK2-201ENST00000245222 TRIM26Q12899 539 aaPredicted RBP22.52■■□□□ 1.2
SPHK2-201ENST00000245222 PABPN1Q86U42 306 aaKnown RBP eCLIP22.49■■□□□ 1.19
SPHK2-201ENST00000245222 EHMT2Q96KQ7 1210 aa22.46■■□□□ 1.19
SPHK2-201ENST00000245222 FAM9AQ8IZU1 332 aaPredicted RBP22.42■■□□□ 1.18
SPHK2-201ENST00000245222 BAZ1AQ9NRL2 1556 aaPredicted RBP22.39■■□□□ 1.18
SPHK2-201ENST00000245222 SMARCA4P51532 1647 aa22.28■■□□□ 1.16
SPHK2-201ENST00000245222 TRIM41Q8WV44 630 aa22.28■■□□□ 1.16
SPHK2-201ENST00000245222 TOP2AP11388 1531 aaKnown RBP22.15■■□□□ 1.14
SPHK2-201ENST00000245222 EIF4G1Q04637 1599 aaKnown RBP22.13■■□□□ 1.13
SPHK2-201ENST00000245222 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
SPHK2-201ENST00000245222 ZEB1P37275 1124 aaPredicted RBP22.05■■□□□ 1.12
SPHK2-201ENST00000245222 SMARCA2P51531 1590 aa22.04■■□□□ 1.12
SPHK2-201ENST00000245222 SCAF1Q9H7N4 1312 aaKnown RBP21.92■■□□□ 1.1
SPHK2-201ENST00000245222 PEG3Q9GZU2 1588 aa21.9■■□□□ 1.1
SPHK2-201ENST00000245222 ABCC8Q09428 1581 aa21.88■■□□□ 1.09
SPHK2-201ENST00000245222 PELP1Q8IZL8 1130 aaKnown RBP21.87■■□□□ 1.09
SPHK2-201ENST00000245222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
SPHK2-201ENST00000245222 ATAD2BQ9ULI0 1458 aa21.79■■□□□ 1.08
SPHK2-201ENST00000245222 TTBK1Q5TCY1 1321 aaPredicted RBP21.78■■□□□ 1.08
SPHK2-201ENST00000245222 CC2D2AQ9P2K1 1620 aa21.75■■□□□ 1.07
SPHK2-201ENST00000245222 CCER1Q8TC90 406 aaPredicted RBP21.69■■□□□ 1.06
SPHK2-201ENST00000245222 BAZ1BQ9UIG0 1483 aaKnown RBP21.66■■□□□ 1.06
SPHK2-201ENST00000245222 DNAJC5BQ9UF47 199 aa21.63■■□□□ 1.05
SPHK2-201ENST00000245222 SOGA1O94964 1423 aa21.61■■□□□ 1.05
SPHK2-201ENST00000245222 RUSC2Q8N2Y8 1516 aa21.56■■□□□ 1.04
SPHK2-201ENST00000245222 NCAPD3P42695 1498 aa21.55■■□□□ 1.04
SPHK2-201ENST00000245222 NEUROD1Q13562 356 aa21.54■■□□□ 1.04
SPHK2-201ENST00000245222 WRNQ14191 1432 aaPredicted RBP eCLIP21.52■■□□□ 1.04
SPHK2-201ENST00000245222 HMGXB3Q12766 1538 aa21.51■■□□□ 1.03
SPHK2-201ENST00000245222 SYNJ1O43426 1573 aa21.48■■□□□ 1.03
SPHK2-201ENST00000245222 ACIN1Q9UKV3 1341 aaKnown RBP21.47■■□□□ 1.03
SPHK2-201ENST00000245222 DIEXFQ68CQ4 756 aaKnown RBP21.43■■□□□ 1.02
SPHK2-201ENST00000245222 CSRNP3Q8WYN3 585 aa21.41■■□□□ 1.02
SPHK2-201ENST00000245222 EEA1Q15075 1411 aa21.38■■□□□ 1.01
SPHK2-201ENST00000245222 GTF3C3Q9Y5Q9 886 aa21.37■■□□□ 1.01
SPHK2-201ENST00000245222 TNIKQ9UKE5 1360 aa21.32■■□□□ 1
SPHK2-201ENST00000245222 CEP162Q5TB80 1403 aa21.31■■□□□ 1
SPHK2-201ENST00000245222 UBTFP17480 764 aaKnown RBP21.25■□□□□ 0.99
SPHK2-201ENST00000245222 CENPBP07199 599 aaPredicted RBP21.24■□□□□ 0.99
SPHK2-201ENST00000245222 TOP2BQ02880 1626 aa21.24■□□□□ 0.99
SPHK2-201ENST00000245222 GOLGA3Q08378 1498 aa21.23■□□□□ 0.99
SPHK2-201ENST00000245222 YTHDC1Q96MU7 727 aaKnown RBP21.22■□□□□ 0.99
SPHK2-201ENST00000245222 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
SPHK2-201ENST00000245222 KIF21BO75037 1637 aa21.16■□□□□ 0.98
SPHK2-201ENST00000245222 CFTRP13569 1480 aa21.16■□□□□ 0.98
SPHK2-201ENST00000245222 CEP164Q9UPV0 1460 aa21.14■□□□□ 0.98
SPHK2-201ENST00000245222 CUX1P39880 1505 aa21.13■□□□□ 0.97
SPHK2-201ENST00000245222 HNRNPUL2Q1KMD3 747 aaKnown RBP21.11■□□□□ 0.97
SPHK2-201ENST00000245222 RAPGEF2Q9Y4G8 1499 aa21.09■□□□□ 0.97
SPHK2-201ENST00000245222 ZNF316A6NFI3 1004 aaPredicted RBP21.09■□□□□ 0.97
SPHK2-201ENST00000245222 RANGAP1P46060 587 aaPredicted RBP21.05■□□□□ 0.96
SPHK2-201ENST00000245222 PRDM2Q13029 1718 aa20.99■□□□□ 0.95
SPHK2-201ENST00000245222 MIER1Q8N108 512 aa20.98■□□□□ 0.95
SPHK2-201ENST00000245222 CLIP1P30622 1438 aa20.97■□□□□ 0.95
SPHK2-201ENST00000245222 CADPSQ9ULU8 1353 aa20.97■□□□□ 0.95
SPHK2-201ENST00000245222 PRXQ9BXM0 1461 aa20.95■□□□□ 0.94
SPHK2-201ENST00000245222 MYT1Q01538 1121 aa20.94■□□□□ 0.94
SPHK2-201ENST00000245222 NESP48681 1621 aa20.93■□□□□ 0.94
SPHK2-201ENST00000245222 LAMC3Q9Y6N6 1575 aa20.91■□□□□ 0.94
SPHK2-201ENST00000245222 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
SPHK2-201ENST00000245222 KIF27Q86VH2 1401 aa20.86■□□□□ 0.93
SPHK2-201ENST00000245222 VPS8Q8N3P4 1428 aa20.85■□□□□ 0.93
SPHK2-201ENST00000245222 APLP2Q06481 763 aa20.77■□□□□ 0.92
SPHK2-201ENST00000245222 FGD5Q6ZNL6 1462 aa20.76■□□□□ 0.91
SPHK2-201ENST00000245222 CUX2O14529 1486 aa20.75■□□□□ 0.91
SPHK2-201ENST00000245222 FANCD2Q9BXW9 1451 aa20.75■□□□□ 0.91
SPHK2-201ENST00000245222 IGF1RP08069 1367 aa20.74■□□□□ 0.91
SPHK2-201ENST00000245222 ARAP1Q96P48 1450 aa20.74■□□□□ 0.91
SPHK2-201ENST00000245222 PDS5BQ9NTI5 1447 aa20.72■□□□□ 0.91
SPHK2-201ENST00000245222 KIF21AQ7Z4S6 1674 aa20.71■□□□□ 0.91
SPHK2-201ENST00000245222 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
SPHK2-201ENST00000245222 ARHGAP35Q9NRY4 1499 aa20.61■□□□□ 0.89
SPHK2-201ENST00000245222 DNMBPQ6XZF7 1577 aa20.61■□□□□ 0.89
SPHK2-201ENST00000245222 ERCC6Q03468 1493 aa20.61■□□□□ 0.89
SPHK2-201ENST00000245222 TOPBP1Q92547 1522 aa20.61■□□□□ 0.89
SPHK2-201ENST00000245222 CARMIL1Q5VZK9 1371 aa20.6■□□□□ 0.89
SPHK2-201ENST00000245222 POLA1P09884 1462 aaPredicted RBP20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms