RNA–Protein interactions for RNA: ENST00000222271.6

COMP-201, Transcript of cartilage oligomeric matrix protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMP, Length 2,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMP-201ENST00000222271 NISCHQ9Y2I1 1504 aa31.82■■■□□ 2.68
COMP-201ENST00000222271 CCDC180Q9P1Z9 1646 aa27.74■■■□□ 2.03
COMP-201ENST00000222271 ABCC9O60706 1549 aa26.77■■□□□ 1.88
COMP-201ENST00000222271 DCAF8L2P0C7V8 631 aa26.75■■□□□ 1.87
COMP-201ENST00000222271 ZCCHC6Q5VYS8 1495 aaKnown RBP26.65■■□□□ 1.86
COMP-201ENST00000222271 SHROOM4Q9ULL8 1493 aa26.44■■□□□ 1.82
COMP-201ENST00000222271 DCAF1Q9Y4B6 1507 aa26.13■■□□□ 1.77
COMP-201ENST00000222271 NACADO15069 1562 aa25.93■■□□□ 1.74
COMP-201ENST00000222271 SUPT5HO00267 1087 aaKnown RBP25.92■■□□□ 1.74
COMP-201ENST00000222271 MYO15BQ96JP2 1530 aa25.89■■□□□ 1.73
COMP-201ENST00000222271 RB1CC1Q8TDY2 1594 aa25.82■■□□□ 1.72
COMP-201ENST00000222271 SCRIBQ14160 1630 aa25.72■■□□□ 1.71
COMP-201ENST00000222271 UNC13AQ9UPW8 1703 aa25.37■■□□□ 1.65
COMP-201ENST00000222271 HRCP23327 699 aa25.33■■□□□ 1.65
COMP-201ENST00000222271 PABPN1Q86U42 306 aaKnown RBP eCLIP25.28■■□□□ 1.64
COMP-201ENST00000222271 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
COMP-201ENST00000222271 BICRAQ9NZM4 1560 aa25.09■■□□□ 1.61
COMP-201ENST00000222271 CECR2Q9BXF3 1484 aa24.87■■□□□ 1.57
COMP-201ENST00000222271 PPARGC1BQ86YN6 1023 aaKnown RBP24.82■■□□□ 1.56
COMP-201ENST00000222271 PCGF6Q9BYE7 350 aa24.75■■□□□ 1.55
COMP-201ENST00000222271 MROH2BQ7Z745 1585 aa24.65■■□□□ 1.54
COMP-201ENST00000222271 RSF1Q96T23 1441 aaPredicted RBP24.64■■□□□ 1.53
COMP-201ENST00000222271 BAZ1AQ9NRL2 1556 aaPredicted RBP24.57■■□□□ 1.52
COMP-201ENST00000222271 PELP1Q8IZL8 1130 aaKnown RBP24.53■■□□□ 1.52
COMP-201ENST00000222271 SMARCA4P51532 1647 aa24.52■■□□□ 1.52
COMP-201ENST00000222271 LOC105371045A0A1W2PR82 267 aa24.48■■□□□ 1.51
COMP-201ENST00000222271 WIZO95785 1651 aa24.47■■□□□ 1.51
COMP-201ENST00000222271 EIF4G1Q04637 1599 aaKnown RBP24.38■■□□□ 1.49
COMP-201ENST00000222271 ATAD2BQ9ULI0 1458 aa24.2■■□□□ 1.46
COMP-201ENST00000222271 TRIM41Q8WV44 630 aa24.12■■□□□ 1.45
COMP-201ENST00000222271 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
COMP-201ENST00000222271 CC2D2AQ9P2K1 1620 aa24.11■■□□□ 1.45
COMP-201ENST00000222271 SMARCA2P51531 1590 aa24.11■■□□□ 1.45
COMP-201ENST00000222271 BAZ1BQ9UIG0 1483 aaKnown RBP24.08■■□□□ 1.44
COMP-201ENST00000222271 TOP2AP11388 1531 aaKnown RBP24.08■■□□□ 1.44
COMP-201ENST00000222271 SCAF1Q9H7N4 1312 aaKnown RBP24.03■■□□□ 1.44
COMP-201ENST00000222271 TRIM26Q12899 539 aaPredicted RBP23.98■■□□□ 1.43
COMP-201ENST00000222271 NCAPD3P42695 1498 aa23.97■■□□□ 1.43
COMP-201ENST00000222271 FAM9AQ8IZU1 332 aaPredicted RBP23.95■■□□□ 1.42
COMP-201ENST00000222271 CCDC88BA6NC98 1476 aa23.92■■□□□ 1.42
COMP-201ENST00000222271 DNAJC5BQ9UF47 199 aa23.91■■□□□ 1.42
COMP-201ENST00000222271 HMGXB3Q12766 1538 aa23.88■■□□□ 1.41
COMP-201ENST00000222271 ZEB1P37275 1124 aaPredicted RBP23.76■■□□□ 1.39
COMP-201ENST00000222271 EHMT2Q96KQ7 1210 aa23.76■■□□□ 1.39
COMP-201ENST00000222271 MYT1Q01538 1121 aa23.58■■□□□ 1.37
COMP-201ENST00000222271 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
COMP-201ENST00000222271 NESP48681 1621 aa23.42■■□□□ 1.34
COMP-201ENST00000222271 CADPSQ9ULU8 1353 aa23.41■■□□□ 1.34
COMP-201ENST00000222271 ACIN1Q9UKV3 1341 aaKnown RBP23.4■■□□□ 1.34
COMP-201ENST00000222271 CFTRP13569 1480 aa23.4■■□□□ 1.34
COMP-201ENST00000222271 NEUROD1Q13562 356 aa23.33■■□□□ 1.33
COMP-201ENST00000222271 SOGA1O94964 1423 aa23.24■■□□□ 1.31
COMP-201ENST00000222271 WRNQ14191 1432 aaPredicted RBP eCLIP23.21■■□□□ 1.31
COMP-201ENST00000222271 GTF3C3Q9Y5Q9 886 aa23.21■■□□□ 1.31
COMP-201ENST00000222271 PRDM2Q13029 1718 aa23.2■■□□□ 1.3
COMP-201ENST00000222271 LAMC3Q9Y6N6 1575 aa23.2■■□□□ 1.3
COMP-201ENST00000222271 FANCD2Q9BXW9 1451 aa23.18■■□□□ 1.3
COMP-201ENST00000222271 RUSC2Q8N2Y8 1516 aa23.15■■□□□ 1.3
COMP-201ENST00000222271 SYNJ1O43426 1573 aa23.14■■□□□ 1.29
COMP-201ENST00000222271 CEP162Q5TB80 1403 aa23.12■■□□□ 1.29
COMP-201ENST00000222271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.11■■□□□ 1.29
COMP-201ENST00000222271 PDS5BQ9NTI5 1447 aa23.08■■□□□ 1.29
COMP-201ENST00000222271 CSRNP3Q8WYN3 585 aa23.07■■□□□ 1.28
COMP-201ENST00000222271 TNIKQ9UKE5 1360 aa23.07■■□□□ 1.28
COMP-201ENST00000222271 EEA1Q15075 1411 aa23.06■■□□□ 1.28
COMP-201ENST00000222271 CENPBP07199 599 aaPredicted RBP23.06■■□□□ 1.28
COMP-201ENST00000222271 KIF21AQ7Z4S6 1674 aa23.05■■□□□ 1.28
COMP-201ENST00000222271 CUX1P39880 1505 aa23.04■■□□□ 1.28
COMP-201ENST00000222271 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
COMP-201ENST00000222271 CCER1Q8TC90 406 aaPredicted RBP23■■□□□ 1.27
COMP-201ENST00000222271 TTBK1Q5TCY1 1321 aaPredicted RBP22.99■■□□□ 1.27
COMP-201ENST00000222271 TOP2BQ02880 1626 aa22.98■■□□□ 1.27
COMP-201ENST00000222271 UBTFP17480 764 aaKnown RBP22.98■■□□□ 1.27
COMP-201ENST00000222271 ERCC6Q03468 1493 aa22.94■■□□□ 1.26
COMP-201ENST00000222271 DIEXFQ68CQ4 756 aaKnown RBP22.94■■□□□ 1.26
COMP-201ENST00000222271 GOLGA3Q08378 1498 aa22.94■■□□□ 1.26
COMP-201ENST00000222271 BIVM-ERCC5R4GMW8 1640 aa22.93■■□□□ 1.26
COMP-201ENST00000222271 URB2Q14146 1524 aaKnown RBP22.9■■□□□ 1.26
COMP-201ENST00000222271 TOPBP1Q92547 1522 aa22.88■■□□□ 1.25
COMP-201ENST00000222271 FGD5Q6ZNL6 1462 aa22.85■■□□□ 1.25
COMP-201ENST00000222271 DNMBPQ6XZF7 1577 aa22.85■■□□□ 1.25
COMP-201ENST00000222271 KIF21BO75037 1637 aa22.8■■□□□ 1.24
COMP-201ENST00000222271 MRC2Q9UBG0 1479 aa22.79■■□□□ 1.24
COMP-201ENST00000222271 RAD54L2Q9Y4B4 1467 aa22.78■■□□□ 1.24
COMP-201ENST00000222271 POLA1P09884 1462 aaPredicted RBP22.77■■□□□ 1.24
COMP-201ENST00000222271 CUX2O14529 1486 aa22.68■■□□□ 1.22
COMP-201ENST00000222271 CLIP1P30622 1438 aa22.68■■□□□ 1.22
COMP-201ENST00000222271 RAPGEF2Q9Y4G8 1499 aa22.67■■□□□ 1.22
COMP-201ENST00000222271 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
COMP-201ENST00000222271 WDR62O43379 1518 aa22.65■■□□□ 1.22
COMP-201ENST00000222271 KIF27Q86VH2 1401 aa22.62■■□□□ 1.21
COMP-201ENST00000222271 TDRD9Q8NDG6 1382 aaKnown RBP22.6■■□□□ 1.21
COMP-201ENST00000222271 YTHDC1Q96MU7 727 aaKnown RBP22.58■■□□□ 1.21
COMP-201ENST00000222271 VPS8Q8N3P4 1428 aa22.58■■□□□ 1.21
COMP-201ENST00000222271 ABCA10Q8WWZ4 1543 aa22.56■■□□□ 1.2
COMP-201ENST00000222271 RANGAP1P46060 587 aaPredicted RBP22.54■■□□□ 1.2
COMP-201ENST00000222271 TARBP1Q13395 1621 aaKnown RBP22.52■■□□□ 1.2
COMP-201ENST00000222271 WDR97A6NE52 1622 aa22.49■■□□□ 1.19
COMP-201ENST00000222271 AQRO60306 1485 aaKnown RBP eCLIP22.49■■□□□ 1.19
COMP-201ENST00000222271 ZNF316A6NFI3 1004 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms