RNA–Protein interactions for RNA: ENST00000216252.3

PHF5A-201, Transcript of PHD finger protein 5A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF5A, Length 1,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF5A-201ENST00000216252 AEBP2Q6ZN18 517 aaPredicted RBP27.98■■■□□ 2.07
PHF5A-201ENST00000216252 DNAJC5BQ9UF47 199 aa27.79■■■□□ 2.04
PHF5A-201ENST00000216252 CHIC1Q5VXU3 224 aa27.65■■■□□ 2.02
PHF5A-201ENST00000216252 DNAJC5Q9H3Z4 198 aa27.5■■□□□ 1.99
PHF5A-201ENST00000216252 ABCC9O60706 1549 aa27■■□□□ 1.91
PHF5A-201ENST00000216252 NISCHQ9Y2I1 1504 aa25.96■■□□□ 1.75
PHF5A-201ENST00000216252 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
PHF5A-201ENST00000216252 PABPN1Q86U42 306 aaKnown RBP eCLIP24.74■■□□□ 1.55
PHF5A-201ENST00000216252 CECR2Q9BXF3 1484 aa24.63■■□□□ 1.53
PHF5A-201ENST00000216252 RB1CC1Q8TDY2 1594 aa24.53■■□□□ 1.52
PHF5A-201ENST00000216252 CUX2O14529 1486 aa24.41■■□□□ 1.5
PHF5A-201ENST00000216252 CCDC180Q9P1Z9 1646 aa24.39■■□□□ 1.49
PHF5A-201ENST00000216252 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
PHF5A-201ENST00000216252 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
PHF5A-201ENST00000216252 ILDR1Q86SU0 546 aaPredicted RBP24.05■■□□□ 1.44
PHF5A-201ENST00000216252 UNC13AQ9UPW8 1703 aa23.98■■□□□ 1.43
PHF5A-201ENST00000216252 BICRAQ9NZM4 1560 aa23.93■■□□□ 1.42
PHF5A-201ENST00000216252 SENP3Q9H4L4 574 aaPredicted RBP23.78■■□□□ 1.4
PHF5A-201ENST00000216252 NACADO15069 1562 aa23.71■■□□□ 1.39
PHF5A-201ENST00000216252 EIF4G1Q04637 1599 aaKnown RBP23.55■■□□□ 1.36
PHF5A-201ENST00000216252 ERCC6Q03468 1493 aa23.52■■□□□ 1.36
PHF5A-201ENST00000216252 SHROOM4Q9ULL8 1493 aa23.33■■□□□ 1.33
PHF5A-201ENST00000216252 TRHP20396 242 aaPredicted RBP23.13■■□□□ 1.29
PHF5A-201ENST00000216252 DCAF8L2P0C7V8 631 aa23.03■■□□□ 1.28
PHF5A-201ENST00000216252 OSCARQ8IYS5 282 aa22.88■■□□□ 1.25
PHF5A-201ENST00000216252 RIMBP3CA6NJZ7 1639 aa22.83■■□□□ 1.25
PHF5A-201ENST00000216252 RIMBP3BA6NNM3 1639 aa22.83■■□□□ 1.25
PHF5A-201ENST00000216252 RIMBP3Q9UFD9 1639 aa22.83■■□□□ 1.25
PHF5A-201ENST00000216252 THOC2Q8NI27 1593 aaKnown RBP22.74■■□□□ 1.23
PHF5A-201ENST00000216252 BAZ1AQ9NRL2 1556 aaPredicted RBP22.67■■□□□ 1.22
PHF5A-201ENST00000216252 SOCS7O14512 581 aa22.61■■□□□ 1.21
PHF5A-201ENST00000216252 PLPPR3Q6T4P5 718 aa22.61■■□□□ 1.21
PHF5A-201ENST00000216252 LMTK3Q96Q04 1460 aa22.58■■□□□ 1.2
PHF5A-201ENST00000216252 CYB5RLQ6IPT4 315 aa22.51■■□□□ 1.19
PHF5A-201ENST00000216252 MYO15BQ96JP2 1530 aa22.51■■□□□ 1.19
PHF5A-201ENST00000216252 ARHGEF11O15085 1522 aa22.48■■□□□ 1.19
PHF5A-201ENST00000216252 NESP48681 1621 aa22.44■■□□□ 1.18
PHF5A-201ENST00000216252 FBXO41Q8TF61 875 aa22.33■■□□□ 1.17
PHF5A-201ENST00000216252 SMARCA2P51531 1590 aa22.28■■□□□ 1.16
PHF5A-201ENST00000216252 ILDR2Q71H61 639 aa22.25■■□□□ 1.15
PHF5A-201ENST00000216252 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
PHF5A-201ENST00000216252 ARAP1Q96P48 1450 aa22.07■■□□□ 1.12
PHF5A-201ENST00000216252 KIF21AQ7Z4S6 1674 aa22.05■■□□□ 1.12
PHF5A-201ENST00000216252 ERCC6L2Q5T890 1561 aa22.04■■□□□ 1.12
PHF5A-201ENST00000216252 KDM4FA0A1W2PPD8 638 aa22■■□□□ 1.11
PHF5A-201ENST00000216252 FOXD1Q16676 465 aa21.99■■□□□ 1.11
PHF5A-201ENST00000216252 NCAPD3P42695 1498 aa21.95■■□□□ 1.1
PHF5A-201ENST00000216252 LAMC3Q9Y6N6 1575 aa21.86■■□□□ 1.09
PHF5A-201ENST00000216252 DISP3Q9P2K9 1392 aa21.86■■□□□ 1.09
PHF5A-201ENST00000216252 PDS5BQ9NTI5 1447 aa21.84■■□□□ 1.09
PHF5A-201ENST00000216252 WDR62O43379 1518 aa21.82■■□□□ 1.08
PHF5A-201ENST00000216252 MRC2Q9UBG0 1479 aa21.79■■□□□ 1.08
PHF5A-201ENST00000216252 HECW2Q9P2P5 1572 aa21.72■■□□□ 1.07
PHF5A-201ENST00000216252 RSF1Q96T23 1441 aaPredicted RBP21.54■■□□□ 1.04
PHF5A-201ENST00000216252 HMGXB3Q12766 1538 aa21.5■■□□□ 1.03
PHF5A-201ENST00000216252 ATAD2BQ9ULI0 1458 aa21.47■■□□□ 1.03
PHF5A-201ENST00000216252 SYNJ2O15056 1496 aa21.45■■□□□ 1.02
PHF5A-201ENST00000216252 ADRA2BP18089 450 aa21.37■■□□□ 1.01
PHF5A-201ENST00000216252 PPP6R1Q9UPN7 881 aa21.35■■□□□ 1.01
PHF5A-201ENST00000216252 SPATA31D1Q6ZQQ2 1576 aa21.3■■□□□ 1
PHF5A-201ENST00000216252 DCAF1Q9Y4B6 1507 aa21.23■□□□□ 0.99
PHF5A-201ENST00000216252 CHD1O14646 1710 aa21.17■□□□□ 0.98
PHF5A-201ENST00000216252 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
PHF5A-201ENST00000216252 CADPSQ9ULU8 1353 aa21.14■□□□□ 0.98
PHF5A-201ENST00000216252 ADGRL1O94910 1474 aa21.13■□□□□ 0.97
PHF5A-201ENST00000216252 KIF13AQ9H1H9 1805 aa21.12■□□□□ 0.97
PHF5A-201ENST00000216252 BAZ1BQ9UIG0 1483 aaKnown RBP21.11■□□□□ 0.97
PHF5A-201ENST00000216252 ZNF608Q9ULD9 1512 aaPredicted RBP21.08■□□□□ 0.96
PHF5A-201ENST00000216252 SMARCA4P51532 1647 aa21.05■□□□□ 0.96
PHF5A-201ENST00000216252 KDM6BO15054 1643 aa20.97■□□□□ 0.95
PHF5A-201ENST00000216252 FBLN2P98095 1184 aa20.97■□□□□ 0.95
PHF5A-201ENST00000216252 URB2Q14146 1524 aaKnown RBP20.89■□□□□ 0.94
PHF5A-201ENST00000216252 GAPVD1Q14C86 1478 aa20.89■□□□□ 0.94
PHF5A-201ENST00000216252 FANCD2Q9BXW9 1451 aa20.89■□□□□ 0.94
PHF5A-201ENST00000216252 CLASP1Q7Z460 1538 aa20.87■□□□□ 0.93
PHF5A-201ENST00000216252 ZCCHC6Q5VYS8 1495 aaKnown RBP20.86■□□□□ 0.93
PHF5A-201ENST00000216252 IFT140Q96RY7 1462 aa20.84■□□□□ 0.93
PHF5A-201ENST00000216252 PIAS4Q8N2W9 510 aaPredicted RBP20.83■□□□□ 0.93
PHF5A-201ENST00000216252 EIF4G3O43432 1585 aaKnown RBP20.8■□□□□ 0.92
PHF5A-201ENST00000216252 CERKQ8TCT0 537 aa20.78■□□□□ 0.92
PHF5A-201ENST00000216252 FAM69CQ0P6D2 419 aa20.72■□□□□ 0.91
PHF5A-201ENST00000216252 ABCC10Q5T3U5 1492 aa20.61■□□□□ 0.89
PHF5A-201ENST00000216252 SYNJ1O43426 1573 aa20.6■□□□□ 0.89
PHF5A-201ENST00000216252 PEG3Q9GZU2 1588 aa20.59■□□□□ 0.89
PHF5A-201ENST00000216252 AQRO60306 1485 aaKnown RBP eCLIP20.56■□□□□ 0.885e-8■■■■■ 36.3
PHF5A-201ENST00000216252 TSPOAP1O95153 1857 aa20.47■□□□□ 0.87
PHF5A-201ENST00000216252 TOP2BQ02880 1626 aa20.45■□□□□ 0.87
PHF5A-201ENST00000216252 DIP2BQ9P265 1576 aa20.45■□□□□ 0.86
PHF5A-201ENST00000216252 CHMP7Q8WUX9 453 aaPredicted RBP20.38■□□□□ 0.85
PHF5A-201ENST00000216252 CFTRP13569 1480 aa20.34■□□□□ 0.85
PHF5A-201ENST00000216252 PCF11O94913 1555 aaKnown RBP20.25■□□□□ 0.83
PHF5A-201ENST00000216252 MAPKBP1O60336 1514 aa20.25■□□□□ 0.83
PHF5A-201ENST00000216252 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
PHF5A-201ENST00000216252 MSH5O43196 834 aa20.23■□□□□ 0.83
PHF5A-201ENST00000216252 TARBP1Q13395 1621 aaKnown RBP20.23■□□□□ 0.83
PHF5A-201ENST00000216252 TOPBP1Q92547 1522 aa20.19■□□□□ 0.82
PHF5A-201ENST00000216252 MROH2BQ7Z745 1585 aa20.15■□□□□ 0.82
PHF5A-201ENST00000216252 NPM1P06748 294 aaKnown RBP eCLIP20.14■□□□□ 0.81
PHF5A-201ENST00000216252 MAGI1Q96QZ7 1491 aaPredicted RBP20.09■□□□□ 0.81
PHF5A-201ENST00000216252 COL17A1Q9UMD9 1497 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms