RNA–Protein interactions for RNA: ENST00000215631.8

GADD45B-201, Transcript of growth arrest and DNA damage inducible beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GADD45B, Length 1,373 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45B-201ENST00000215631 NISCHQ9Y2I1 1504 aa40.59■■■■■ 4.09
GADD45B-201ENST00000215631 CCDC180Q9P1Z9 1646 aa36.2■■■■□ 3.39
GADD45B-201ENST00000215631 ABCC9O60706 1549 aa36.13■■■■□ 3.37
GADD45B-201ENST00000215631 RB1CC1Q8TDY2 1594 aa34.41■■■■□ 3.1
GADD45B-201ENST00000215631 DCAF8L2P0C7V8 631 aa34.29■■■■□ 3.08
GADD45B-201ENST00000215631 NACADO15069 1562 aa34.25■■■■□ 3.07
GADD45B-201ENST00000215631 MYO15BQ96JP2 1530 aa33.86■■■■□ 3.01
GADD45B-201ENST00000215631 DNAJC5BQ9UF47 199 aa33.77■■■■□ 3
GADD45B-201ENST00000215631 PABPN1Q86U42 306 aaKnown RBP eCLIP33.75■■■□□ 2.99
GADD45B-201ENST00000215631 ZCCHC6Q5VYS8 1495 aaKnown RBP33.67■■■□□ 2.98
GADD45B-201ENST00000215631 UNC13AQ9UPW8 1703 aa33.56■■■□□ 2.96
GADD45B-201ENST00000215631 DCAF1Q9Y4B6 1507 aa33.51■■■□□ 2.95
GADD45B-201ENST00000215631 BICRAQ9NZM4 1560 aa33.43■■■□□ 2.94
GADD45B-201ENST00000215631 SCRIBQ14160 1630 aa33.07■■■□□ 2.89
GADD45B-201ENST00000215631 SHROOM4Q9ULL8 1493 aa32.95■■■□□ 2.87
GADD45B-201ENST00000215631 CC2D2AQ9P2K1 1620 aa32.59■■■□□ 2.81
GADD45B-201ENST00000215631 EIF4G1Q04637 1599 aaKnown RBP32.58■■■□□ 2.81
GADD45B-201ENST00000215631 CECR2Q9BXF3 1484 aa32.51■■■□□ 2.79
GADD45B-201ENST00000215631 NCAPD3P42695 1498 aa31.67■■■□□ 2.66
GADD45B-201ENST00000215631 ATAD2BQ9ULI0 1458 aa31.6■■■□□ 2.65
GADD45B-201ENST00000215631 SMARCA4P51532 1647 aa31.57■■■□□ 2.64
GADD45B-201ENST00000215631 SMARCA2P51531 1590 aa31.47■■■□□ 2.63
GADD45B-201ENST00000215631 BAZ1AQ9NRL2 1556 aaPredicted RBP31.46■■■□□ 2.63
GADD45B-201ENST00000215631 HMGXB3Q12766 1538 aa31.38■■■□□ 2.61
GADD45B-201ENST00000215631 MROH2BQ7Z745 1585 aa31.3■■■□□ 2.6
GADD45B-201ENST00000215631 BAZ1BQ9UIG0 1483 aaKnown RBP31.28■■■□□ 2.6
GADD45B-201ENST00000215631 PEG3Q9GZU2 1588 aa31.26■■■□□ 2.59
GADD45B-201ENST00000215631 ERCC6Q03468 1493 aa31.15■■■□□ 2.58
GADD45B-201ENST00000215631 NESP48681 1621 aa31.1■■■□□ 2.57
GADD45B-201ENST00000215631 CUX2O14529 1486 aa30.99■■■□□ 2.55
GADD45B-201ENST00000215631 WIZO95785 1651 aa30.89■■■□□ 2.54
GADD45B-201ENST00000215631 LAMC3Q9Y6N6 1575 aa30.84■■■□□ 2.53
GADD45B-201ENST00000215631 DNAJC5Q9H3Z4 198 aa30.81■■■□□ 2.52
GADD45B-201ENST00000215631 RSF1Q96T23 1441 aaPredicted RBP30.77■■■□□ 2.52
GADD45B-201ENST00000215631 CADPSQ9ULU8 1353 aa30.75■■■□□ 2.51
GADD45B-201ENST00000215631 PDS5BQ9NTI5 1447 aa30.72■■■□□ 2.51
GADD45B-201ENST00000215631 THOC2Q8NI27 1593 aaKnown RBP30.65■■■□□ 2.5
GADD45B-201ENST00000215631 KIF21AQ7Z4S6 1674 aa30.61■■■□□ 2.49
GADD45B-201ENST00000215631 TOP2AP11388 1531 aaKnown RBP30.51■■■□□ 2.48
GADD45B-201ENST00000215631 CFTRP13569 1480 aa30.42■■■□□ 2.46
GADD45B-201ENST00000215631 MRC2Q9UBG0 1479 aa30.42■■■□□ 2.46
GADD45B-201ENST00000215631 FANCD2Q9BXW9 1451 aa30.36■■■□□ 2.45
GADD45B-201ENST00000215631 CEP164Q9UPV0 1460 aa30.34■■■□□ 2.45
GADD45B-201ENST00000215631 WDR62O43379 1518 aa30.31■■■□□ 2.44
GADD45B-201ENST00000215631 CCDC88BA6NC98 1476 aa30.23■■■□□ 2.43
GADD45B-201ENST00000215631 URB2Q14146 1524 aaKnown RBP30.1■■■□□ 2.41
GADD45B-201ENST00000215631 PRDM2Q13029 1718 aa29.95■■■□□ 2.39
GADD45B-201ENST00000215631 TOPBP1Q92547 1522 aa29.81■■■□□ 2.36
GADD45B-201ENST00000215631 IFT140Q96RY7 1462 aa29.75■■■□□ 2.35
GADD45B-201ENST00000215631 ABCC8Q09428 1581 aa29.74■■■□□ 2.35
GADD45B-201ENST00000215631 OSCARQ8IYS5 282 aa29.72■■■□□ 2.35
GADD45B-201ENST00000215631 ZNF608Q9ULD9 1512 aaPredicted RBP29.71■■■□□ 2.35
GADD45B-201ENST00000215631 DNMBPQ6XZF7 1577 aa29.67■■■□□ 2.34
GADD45B-201ENST00000215631 SUPT5HO00267 1087 aaKnown RBP29.65■■■□□ 2.34
GADD45B-201ENST00000215631 TRIM41Q8WV44 630 aa29.56■■■□□ 2.32
GADD45B-201ENST00000215631 POLA1P09884 1462 aaPredicted RBP29.52■■■□□ 2.32
GADD45B-201ENST00000215631 AQRO60306 1485 aaKnown RBP eCLIP29.49■■■□□ 2.314e-9■■■■□ 26
GADD45B-201ENST00000215631 TARBP1Q13395 1621 aaKnown RBP29.48■■■□□ 2.31
GADD45B-201ENST00000215631 EIF4G3O43432 1585 aaKnown RBP29.46■■■□□ 2.31
GADD45B-201ENST00000215631 RAD54L2Q9Y4B4 1467 aa29.44■■■□□ 2.3
GADD45B-201ENST00000215631 SOGA1O94964 1423 aa29.43■■■□□ 2.3
GADD45B-201ENST00000215631 CUX1P39880 1505 aa29.37■■■□□ 2.29
GADD45B-201ENST00000215631 TDRD9Q8NDG6 1382 aaKnown RBP29.37■■■□□ 2.29
GADD45B-201ENST00000215631 FGD5Q6ZNL6 1462 aa29.37■■■□□ 2.29
GADD45B-201ENST00000215631 FBLN2P98095 1184 aa29.28■■■□□ 2.28
GADD45B-201ENST00000215631 RIMBP3CA6NJZ7 1639 aa29.18■■■□□ 2.26
GADD45B-201ENST00000215631 RIMBP3BA6NNM3 1639 aa29.18■■■□□ 2.26
GADD45B-201ENST00000215631 RIMBP3Q9UFD9 1639 aa29.18■■■□□ 2.26
GADD45B-201ENST00000215631 CHD1O14646 1710 aa29.18■■■□□ 2.26
GADD45B-201ENST00000215631 ARHGEF11O15085 1522 aa29.15■■■□□ 2.26
GADD45B-201ENST00000215631 WDR97A6NE52 1622 aa29.15■■■□□ 2.26
GADD45B-201ENST00000215631 SNAPC4Q5SXM2 1469 aa29.14■■■□□ 2.26
GADD45B-201ENST00000215631 GRIN2BQ13224 1484 aa29.11■■■□□ 2.25
GADD45B-201ENST00000215631 CHMP7Q8WUX9 453 aaPredicted RBP29.1■■■□□ 2.25
GADD45B-201ENST00000215631 MAGI1Q96QZ7 1491 aaPredicted RBP29.06■■■□□ 2.24
GADD45B-201ENST00000215631 GAPVD1Q14C86 1478 aa29.05■■■□□ 2.24
GADD45B-201ENST00000215631 ABCA10Q8WWZ4 1543 aa29.04■■■□□ 2.24
GADD45B-201ENST00000215631 CYB5RLQ6IPT4 315 aa29.02■■■□□ 2.24
GADD45B-201ENST00000215631 WRNQ14191 1432 aaPredicted RBP eCLIP29■■■□□ 2.23
GADD45B-201ENST00000215631 SYNJ2O15056 1496 aa28.98■■■□□ 2.23
GADD45B-201ENST00000215631 TOP2BQ02880 1626 aa28.93■■■□□ 2.22
GADD45B-201ENST00000215631 ABCA5Q8WWZ7 1642 aa28.92■■■□□ 2.22
GADD45B-201ENST00000215631 SYNJ1O43426 1573 aa28.92■■■□□ 2.22
GADD45B-201ENST00000215631 PBRM1Q86U86 1689 aa28.9■■■□□ 2.22
GADD45B-201ENST00000215631 BIVM-ERCC5R4GMW8 1640 aa28.9■■■□□ 2.22
GADD45B-201ENST00000215631 ARAP1Q96P48 1450 aa28.9■■■□□ 2.22
GADD45B-201ENST00000215631 CLASP1Q7Z460 1538 aa28.89■■■□□ 2.22
GADD45B-201ENST00000215631 GRIN2AQ12879 1464 aa28.72■■■□□ 2.19
GADD45B-201ENST00000215631 FHAD1B1AJZ9 1412 aa28.69■■■□□ 2.18
GADD45B-201ENST00000215631 ADAMTS12P58397 1594 aa28.69■■■□□ 2.18
GADD45B-201ENST00000215631 ERICH3Q5RHP9 1530 aa28.66■■■□□ 2.18
GADD45B-201ENST00000215631 NUP160Q12769 1436 aa28.63■■■□□ 2.17
GADD45B-201ENST00000215631 TRHP20396 242 aaPredicted RBP28.61■■■□□ 2.17
GADD45B-201ENST00000215631 CEP170Q5SW79 1584 aa28.58■■■□□ 2.17
GADD45B-201ENST00000215631 ERCC6L2Q5T890 1561 aa28.5■■■□□ 2.15
GADD45B-201ENST00000215631 IGF1RP08069 1367 aa28.45■■■□□ 2.15
GADD45B-201ENST00000215631 KIF27Q86VH2 1401 aa28.43■■■□□ 2.14
GADD45B-201ENST00000215631 JPH4Q96JJ6 628 aa28.42■■■□□ 2.14
GADD45B-201ENST00000215631 SHROOM2Q13796 1616 aa28.41■■■□□ 2.14
GADD45B-201ENST00000215631 PRG4Q92954 1404 aaPredicted RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms