RNA–Protein interactions for RNA: ENSMUST00000203933.2

Firre-206, mousemouse

TSL 1 (best) BASIC

Gene Firre, Length 5,555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Firre-206ENSMUST00000203933 Rhox8Q6VSS7 320 aa18.01■□□□□ 0.47
Firre-206ENSMUST00000203933 Rpgrip1Q9EPQ2 1331 aa16.1■□□□□ 0.17
Firre-206ENSMUST00000203933 Esf1Q3V1V3 845 aaKnown RBP15.98■□□□□ 0.15
Firre-206ENSMUST00000203933 Ccdc136Q3TVA9 1136 aa15.97■□□□□ 0.15
Firre-206ENSMUST00000203933 Ehmt2Q9Z148 1263 aaKnown RBP15.91■□□□□ 0.14
Firre-206ENSMUST00000203933 Cngb1E1AZ71 1325 aa15.88■□□□□ 0.13
Firre-206ENSMUST00000203933 Zeb1Q64318 1117 aa15.7■□□□□ 0.1
Firre-206ENSMUST00000203933 Ube2uB1AUC4 352 aa15.65■□□□□ 0.1
Firre-206ENSMUST00000203933 Gab3Q8BSM5 595 aa15.63■□□□□ 0.09
Firre-206ENSMUST00000203933 Trim41Q5NCC3 630 aa15.57■□□□□ 0.08
Firre-206ENSMUST00000203933 Npm2Q80W85 207 aa15.57■□□□□ 0.08
Firre-206ENSMUST00000203933 Las1lA2BE28 776 aaKnown RBP15.56■□□□□ 0.08
Firre-206ENSMUST00000203933 NischQ80TM9 1593 aa15.47■□□□□ 0.07
Firre-206ENSMUST00000203933 Wdr66E9Q743 1299 aa15.46■□□□□ 0.07
Firre-206ENSMUST00000203933 Myt1lP97500 1187 aa15.43■□□□□ 0.06
Firre-206ENSMUST00000203933 Pelp1Q9DBD5 1123 aaKnown RBP15.1■□□□□ 0.01
Firre-206ENSMUST00000203933 Il27Q8K3I6 234 aa15.04■□□□□ -0
Firre-206ENSMUST00000203933 UbtfP25976 765 aaKnown RBP14.97□□□□□ -0.01
Firre-206ENSMUST00000203933 Acin1Q9JIX8 1338 aaKnown RBP14.92□□□□□ -0.02
Firre-206ENSMUST00000203933 CenpbP27790 599 aa14.85□□□□□ -0.03
Firre-206ENSMUST00000203933 Abcc9P70170 1546 aa14.8□□□□□ -0.04
Firre-206ENSMUST00000203933 Amer1Q7TS75 1132 aa14.72□□□□□ -0.05
Firre-206ENSMUST00000203933 NefmP08553 848 aa14.72□□□□□ -0.05
Firre-206ENSMUST00000203933 Slc24a1Q91WD8 1130 aa14.71□□□□□ -0.06
Firre-206ENSMUST00000203933 Zcchc6Q5BLK4 1491 aaKnown RBP14.7□□□□□ -0.06
Firre-206ENSMUST00000203933 Ap3b1Q9Z1T1 1105 aa14.66□□□□□ -0.06
Firre-206ENSMUST00000203933 Gm35339A0A140LHH9 1649 aa14.65□□□□□ -0.06
Firre-206ENSMUST00000203933 Fam50aQ9WV03 339 aaKnown RBP14.6□□□□□ -0.07
Firre-206ENSMUST00000203933 HrcG5E8J6 738 aa14.58□□□□□ -0.08
Firre-206ENSMUST00000203933 Stra8P70278 393 aa14.57□□□□□ -0.08
Firre-206ENSMUST00000203933 Pcgf6Q99NA9 353 aa14.54□□□□□ -0.08
Firre-206ENSMUST00000203933 Neurod1Q60867 357 aa14.53□□□□□ -0.08
Firre-206ENSMUST00000203933 Os9Q8K2C7 672 aa14.5□□□□□ -0.09
Firre-206ENSMUST00000203933 Ccdc180J3QNE4 1664 aa14.43□□□□□ -0.1
Firre-206ENSMUST00000203933 Cdk11bP24788 784 aaKnown RBP14.41□□□□□ -0.1
Firre-206ENSMUST00000203933 Npm1Q61937 292 aaKnown RBP14.4□□□□□ -0.1
Firre-206ENSMUST00000203933 Anp32bQ9EST5 272 aaKnown RBP14.4□□□□□ -0.1
Firre-206ENSMUST00000203933 NclP09405 707 aaKnown RBP14.39□□□□□ -0.11
Firre-206ENSMUST00000203933 NrdcQ8BHG1 1161 aa14.36□□□□□ -0.11
Firre-206ENSMUST00000203933 Ttbk1Q6PCN3 1308 aa14.35□□□□□ -0.11
Firre-206ENSMUST00000203933 Myt1Q8CFC2 1127 aa14.33□□□□□ -0.12
Firre-206ENSMUST00000203933 Zbtb7cQ8VCZ7 619 aa14.31□□□□□ -0.12
Firre-206ENSMUST00000203933 Ifnlr1Q8CGK5 535 aa14.28□□□□□ -0.12
Firre-206ENSMUST00000203933 Rtl1Q7M732 1744 aa14.27□□□□□ -0.13
Firre-206ENSMUST00000203933 Supt5hO55201 1082 aaKnown RBP14.26□□□□□ -0.13
Firre-206ENSMUST00000203933 Lmod2Q3UHZ5 550 aa14.25□□□□□ -0.13
Firre-206ENSMUST00000203933 Ppargc1bQ8VHJ7 1014 aa14.24□□□□□ -0.13
Firre-206ENSMUST00000203933 Nop58Q6DFW4 536 aaKnown RBP14.23□□□□□ -0.13
Firre-206ENSMUST00000203933 Gm13697A2AK42 830 aa14.22□□□□□ -0.13
Firre-206ENSMUST00000203933 Hnrnpul2Q00PI9 745 aaKnown RBP14.21□□□□□ -0.13
Firre-206ENSMUST00000203933 Eif5bQ05D44 1216 aaKnown RBP14.18□□□□□ -0.14
Firre-206ENSMUST00000203933 NeflP08551 543 aa14.16□□□□□ -0.14
Firre-206ENSMUST00000203933 4933416C03RikQ3V063 378 aa14.16□□□□□ -0.14
Firre-206ENSMUST00000203933 Tnnt3Q9QZ47 272 aa14.16□□□□□ -0.14
Firre-206ENSMUST00000203933 TonslQ6NZL6 1363 aa14.14□□□□□ -0.15
Firre-206ENSMUST00000203933 Plekhg3Q4VAC9 1341 aa14.11□□□□□ -0.15
Firre-206ENSMUST00000203933 Fkbp15Q6P9Q6 1216 aaKnown RBP14.07□□□□□ -0.16
Firre-206ENSMUST00000203933 Chic1Q8CBW7 227 aa14.04□□□□□ -0.16
Firre-206ENSMUST00000203933 Erich6D3Z6S9 713 aa14.04□□□□□ -0.16
Firre-206ENSMUST00000203933 Mier1Q5UAK0 511 aa14.03□□□□□ -0.16
Firre-206ENSMUST00000203933 Atp1b4Q99ME6 356 aa14.03□□□□□ -0.16
Firre-206ENSMUST00000203933 Zbtb4Q5F293 982 aa14.01□□□□□ -0.17
Firre-206ENSMUST00000203933 Abcc8B2RUS7 1588 aa14.01□□□□□ -0.17
Firre-206ENSMUST00000203933 Plppr3Q7TPB0 716 aa14□□□□□ -0.17
Firre-206ENSMUST00000203933 4930567H17RikQ3V0K5 233 aa13.99□□□□□ -0.17
Firre-206ENSMUST00000203933 DiexfQ8BTT6 772 aaKnown RBP13.97□□□□□ -0.17
Firre-206ENSMUST00000203933 Ubl4bQ9CQ84 188 aa13.95□□□□□ -0.18
Firre-206ENSMUST00000203933 Gm13695A2AK44 830 aa13.95□□□□□ -0.18
Firre-206ENSMUST00000203933 Prdm10Q3UTQ7 1184 aa13.9□□□□□ -0.18
Firre-206ENSMUST00000203933 Brd4Q9ESU6 1400 aaKnown RBP13.89□□□□□ -0.19
Firre-206ENSMUST00000203933 Rtl5Q5DTT4 599 aa13.88□□□□□ -0.19
Firre-206ENSMUST00000203933 Nlrp6Q91WS2 869 aa13.83□□□□□ -0.2
Firre-206ENSMUST00000203933 Eid3Q3V124 375 aa13.82□□□□□ -0.2
Firre-206ENSMUST00000203933 Clip1Q922J3 1391 aa13.81□□□□□ -0.2
Firre-206ENSMUST00000203933 Hdac5Q9Z2V6 1113 aa13.78□□□□□ -0.2
Firre-206ENSMUST00000203933 Gm38655A0A286YDK6 273 aa13.77□□□□□ -0.21
Firre-206ENSMUST00000203933 Mapk8ip2Q9ERE9 830 aa13.76□□□□□ -0.21
Firre-206ENSMUST00000203933 ClspnQ80YR7 1315 aa13.75□□□□□ -0.21
Firre-206ENSMUST00000203933 Anp32aO35381 247 aa13.74□□□□□ -0.21
Firre-206ENSMUST00000203933 Polr3glQ8R0C0 218 aa13.73□□□□□ -0.21
Firre-206ENSMUST00000203933 Csrnp3P59055 597 aa13.71□□□□□ -0.22
Firre-206ENSMUST00000203933 Chic2Q9D9G3 165 aa13.67□□□□□ -0.22
Firre-206ENSMUST00000203933 Safb2Q80YR5 991 aaKnown RBP13.67□□□□□ -0.22
Firre-206ENSMUST00000203933 DaxxO35613 739 aa13.63□□□□□ -0.23
Firre-206ENSMUST00000203933 Rb1cc1Q9ESK9 1588 aa13.62□□□□□ -0.23
Firre-206ENSMUST00000203933 Anks4bQ8K3X6 423 aa13.62□□□□□ -0.23
Firre-206ENSMUST00000203933 Ccer2J3QPU5 274 aa13.61□□□□□ -0.23
Firre-206ENSMUST00000203933 Sall2Q9QX96 1004 aa13.61□□□□□ -0.23
Firre-206ENSMUST00000203933 Cep164Q5DU05 1446 aa13.6□□□□□ -0.23
Firre-206ENSMUST00000203933 BlmO88700 1416 aa13.56□□□□□ -0.24
Firre-206ENSMUST00000203933 Clstn2Q9ER65 966 aa13.55□□□□□ -0.24
Firre-206ENSMUST00000203933 Rangap1P46061 589 aaKnown RBP13.54□□□□□ -0.24
Firre-206ENSMUST00000203933 Aplp2Q06335 707 aa13.53□□□□□ -0.24
Firre-206ENSMUST00000203933 Dcaf1Q80TR8 1506 aa13.53□□□□□ -0.24
Firre-206ENSMUST00000203933 P3h3Q8CG70 732 aa13.53□□□□□ -0.24
Firre-206ENSMUST00000203933 Kif15Q6P9L6 1387 aa13.49□□□□□ -0.25
Firre-206ENSMUST00000203933 NacadQ5SWP3 1504 aa13.47□□□□□ -0.25
Firre-206ENSMUST00000203933 ArxO35085 564 aa13.47□□□□□ -0.25
Firre-206ENSMUST00000203933 Setd5Q5XJV7 1441 aa13.46□□□□□ -0.25
Firre-206ENSMUST00000203933 Rsf1E9PWW9 1441 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 60.5 ms