RNA–Protein interactions for RNA: ENSMUST00000197058.1

Gm42827-201, mousemouse

TSL 1 (best) BASIC

Gene Gm42827, Length 1,515 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42827-201ENSMUST00000197058 Chic1Q8CBW7 227 aa26.9■■□□□ 1.9
Gm42827-201ENSMUST00000197058 Mapk8ip2Q9ERE9 830 aa26.44■■□□□ 1.82
Gm42827-201ENSMUST00000197058 Phf23Q8BSN5 401 aa24.12■■□□□ 1.45
Gm42827-201ENSMUST00000197058 Plppr3Q7TPB0 716 aa23.14■■□□□ 1.3
Gm42827-201ENSMUST00000197058 Gab3Q8BSM5 595 aa23.08■■□□□ 1.29
Gm42827-201ENSMUST00000197058 Senp3Q9EP97 568 aaKnown RBP22.05■■□□□ 1.12
Gm42827-201ENSMUST00000197058 Kcna4Q61423 654 aa20.93■□□□□ 0.94
Gm42827-201ENSMUST00000197058 Fam163aQ8CAA5 168 aa19.73■□□□□ 0.75
Gm42827-201ENSMUST00000197058 Trap1aP19473 224 aa19.53■□□□□ 0.72
Gm42827-201ENSMUST00000197058 Hoxd11P23813 323 aa19.5■□□□□ 0.71
Gm42827-201ENSMUST00000197058 Znf219Q6IQX8 726 aa18.82■□□□□ 0.6
Gm42827-201ENSMUST00000197058 Dmrt2Q8BG36 561 aa18.68■□□□□ 0.58
Gm42827-201ENSMUST00000197058 Chrna2Q91X60 512 aa18.52■□□□□ 0.56
Gm42827-201ENSMUST00000197058 Rsph4aQ8BYM7 716 aa18.39■□□□□ 0.53
Gm42827-201ENSMUST00000197058 ArsiQ32KI9 573 aa18.22■□□□□ 0.51
Gm42827-201ENSMUST00000197058 Ppargc1bQ8VHJ7 1014 aa18.18■□□□□ 0.5
Gm42827-201ENSMUST00000197058 Rimbp2Q80U40 1072 aa18.11■□□□□ 0.49
Gm42827-201ENSMUST00000197058 Dnajc5bQ9CQ94 199 aa17.87■□□□□ 0.45
Gm42827-201ENSMUST00000197058 Slc4a1apE9PX68 744 aa17.84■□□□□ 0.45
Gm42827-201ENSMUST00000197058 Atf5O70191 283 aa17.82■□□□□ 0.44
Gm42827-201ENSMUST00000197058 Akt1s1Q9D1F4 257 aa17.81■□□□□ 0.44
Gm42827-201ENSMUST00000197058 Ppp4r2Q0VGB7 417 aa17.7■□□□□ 0.42
Gm42827-201ENSMUST00000197058 Hs6st3Q9QYK4 470 aa17.67■□□□□ 0.42
Gm42827-201ENSMUST00000197058 Slc34a2Q9DBP0 697 aa17.37■□□□□ 0.37
Gm42827-201ENSMUST00000197058 1700123L14RikQ3V2K7 440 aa17.16■□□□□ 0.34
Gm42827-201ENSMUST00000197058 Bach1P97302 739 aa17.12■□□□□ 0.33
Gm42827-201ENSMUST00000197058 Sox12Q04890 314 aa17.01■□□□□ 0.31
Gm42827-201ENSMUST00000197058 WdpcpQ8C456 722 aa16.67■□□□□ 0.26
Gm42827-201ENSMUST00000197058 Znf704Q9ERQ3 566 aa16.33■□□□□ 0.2
Gm42827-201ENSMUST00000197058 Ifnlr1Q8CGK5 535 aa16.25■□□□□ 0.19
Gm42827-201ENSMUST00000197058 C1qtnf12Q8R2Z0 308 aa16.25■□□□□ 0.19
Gm42827-201ENSMUST00000197058 Slc4a5E9Q3M5 1116 aa16.24■□□□□ 0.19
Gm42827-201ENSMUST00000197058 Egfem1Q8C088 590 aa16.21■□□□□ 0.19
Gm42827-201ENSMUST00000197058 Cdca7Q9D0M2 382 aa16.19■□□□□ 0.18
Gm42827-201ENSMUST00000197058 Grwd1Q810D6 446 aaKnown RBP16.17■□□□□ 0.18
Gm42827-201ENSMUST00000197058 G430095P16RikE9Q913 147 aa16.16■□□□□ 0.18
Gm42827-201ENSMUST00000197058 Zbtb7aO88939 569 aaKnown RBP16.15■□□□□ 0.18
Gm42827-201ENSMUST00000197058 Fam71e1A1L3C1 212 aa16.13■□□□□ 0.17
Gm42827-201ENSMUST00000197058 Nlrp6Q91WS2 869 aa16.12■□□□□ 0.17
Gm42827-201ENSMUST00000197058 GapdhsQ64467 440 aa16.09■□□□□ 0.17
Gm42827-201ENSMUST00000197058 Abcb7Q61102 752 aaKnown RBP15.86■□□□□ 0.13
Gm42827-201ENSMUST00000197058 Riok3Q9DBU3 519 aaKnown RBP15.86■□□□□ 0.13
Gm42827-201ENSMUST00000197058 Zbtb12Q9Z150 459 aa15.85■□□□□ 0.13
Gm42827-201ENSMUST00000197058 Rnf216P58283 853 aa15.84■□□□□ 0.13
Gm42827-201ENSMUST00000197058 Ms4a5Q810P8 197 aa15.83■□□□□ 0.12
Gm42827-201ENSMUST00000197058 Npm2Q80W85 207 aa15.79■□□□□ 0.12
Gm42827-201ENSMUST00000197058 AcrbpQ3V140 540 aa15.77■□□□□ 0.11
Gm42827-201ENSMUST00000197058 Trim41Q5NCC3 630 aa15.77■□□□□ 0.11
Gm42827-201ENSMUST00000197058 MyclP10166 368 aa15.71■□□□□ 0.11
Gm42827-201ENSMUST00000197058 Gtpbp6Q3U6U5 514 aa15.68■□□□□ 0.1
Gm42827-201ENSMUST00000197058 Pde4cQ3UEI1 686 aa15.68■□□□□ 0.1
Gm42827-201ENSMUST00000197058 Nkx1-1G3UXB3 402 aa15.6■□□□□ 0.09
Gm42827-201ENSMUST00000197058 Prm3Q62100 101 aa15.54■□□□□ 0.08
Gm42827-201ENSMUST00000197058 Ube2uB1AUC4 352 aa15.48■□□□□ 0.07
Gm42827-201ENSMUST00000197058 Fbln2P37889 1221 aa15.33■□□□□ 0.04
Gm42827-201ENSMUST00000197058 Styxl1Q9DAR2 321 aa15.33■□□□□ 0.04
Gm42827-201ENSMUST00000197058 Rtn4Q99P72 1162 aaKnown RBP15.31■□□□□ 0.04
Gm42827-201ENSMUST00000197058 Kcnn1Q9EQR3 537 aa15.22■□□□□ 0.03
Gm42827-201ENSMUST00000197058 Znf703P0CL69 594 aa15.19■□□□□ 0.02
Gm42827-201ENSMUST00000197058 Tshz2Q68FE9 1030 aa15.19■□□□□ 0.02
Gm42827-201ENSMUST00000197058 Npm3Q9CPP0 175 aaKnown RBP15.17■□□□□ 0.02
Gm42827-201ENSMUST00000197058 Prr29B1ARI9 187 aa15.16■□□□□ 0.02
Gm42827-201ENSMUST00000197058 MpndQ3TV65 487 aa15.14■□□□□ 0.01
Gm42827-201ENSMUST00000197058 Cacnb1Q8R3Z5 597 aa15.11■□□□□ 0.01
Gm42827-201ENSMUST00000197058 Ildr2B5TVM2 661 aa15.1■□□□□ 0.01
Gm42827-201ENSMUST00000197058 Skida1Q80YR3 822 aa15.04■□□□□ -0
Gm42827-201ENSMUST00000197058 Pitpnm1O35954 1243 aa14.94□□□□□ -0.02
Gm42827-201ENSMUST00000197058 Trim35Q8C006 501 aa14.84□□□□□ -0.03
Gm42827-201ENSMUST00000197058 Kank3Q9Z1P7 791 aa14.84□□□□□ -0.03
Gm42827-201ENSMUST00000197058 Pip4p2Q9CZX7 257 aa14.83□□□□□ -0.04
Gm42827-201ENSMUST00000197058 Clcn6O35454 870 aa14.81□□□□□ -0.04
Gm42827-201ENSMUST00000197058 Tcf3P15806 651 aa14.71□□□□□ -0.06
Gm42827-201ENSMUST00000197058 Ppp1r37Q8BKR5 712 aa14.66□□□□□ -0.06
Gm42827-201ENSMUST00000197058 Lrrc43Q3V0L5 667 aa14.6□□□□□ -0.07
Gm42827-201ENSMUST00000197058 Cadps2Q8BYR5 1297 aa14.57□□□□□ -0.08
Gm42827-201ENSMUST00000197058 Jarid2Q62315 1234 aa14.56□□□□□ -0.08
Gm42827-201ENSMUST00000197058 Nyap1Q6PFX7 833 aa14.5□□□□□ -0.09
Gm42827-201ENSMUST00000197058 Ehmt2Q9Z148 1263 aaKnown RBP14.38□□□□□ -0.11
Gm42827-201ENSMUST00000197058 Hnrnpul2Q00PI9 745 aaKnown RBP14.3□□□□□ -0.12
Gm42827-201ENSMUST00000197058 SnphQ80U23 495 aa14.3□□□□□ -0.12
Gm42827-201ENSMUST00000197058 Ecm2Q5FW85 670 aa14.27□□□□□ -0.12
Gm42827-201ENSMUST00000197058 Dok7Q18PE0 504 aa14.26□□□□□ -0.13
Gm42827-201ENSMUST00000197058 Sra1Q80VJ2 232 aa14.21□□□□□ -0.13
Gm42827-201ENSMUST00000197058 Gm35339A0A140LHH9 1649 aa14.17□□□□□ -0.14
Gm42827-201ENSMUST00000197058 MycnP03966 462 aaKnown RBP14.11□□□□□ -0.15
Gm42827-201ENSMUST00000197058 Foxp4Q9DBY0 795 aaKnown RBP14.05□□□□□ -0.16
Gm42827-201ENSMUST00000197058 Hdac5Q9Z2V6 1113 aa14.05□□□□□ -0.16
Gm42827-201ENSMUST00000197058 Pde4dQ01063 747 aa13.98□□□□□ -0.17
Gm42827-201ENSMUST00000197058 NischQ80TM9 1593 aa13.94□□□□□ -0.18
Gm42827-201ENSMUST00000197058 PygbQ8CI94 843 aaKnown RBP13.91□□□□□ -0.18
Gm42827-201ENSMUST00000197058 ArntlQ9WTL8 632 aa13.91□□□□□ -0.18
Gm42827-201ENSMUST00000197058 Fam117bQ3U3E2 584 aa13.9□□□□□ -0.18
Gm42827-201ENSMUST00000197058 Repin1Q5U4E2 545 aa13.9□□□□□ -0.18
Gm42827-201ENSMUST00000197058 Gm13697A2AK42 830 aa13.88□□□□□ -0.19
Gm42827-201ENSMUST00000197058 Zbtb7bQ64321 544 aa13.88□□□□□ -0.19
Gm42827-201ENSMUST00000197058 CrebzfQ91ZR3 358 aa13.87□□□□□ -0.19
Gm42827-201ENSMUST00000197058 Spock2Q9ER58 423 aa13.87□□□□□ -0.19
Gm42827-201ENSMUST00000197058 Prdm10Q3UTQ7 1184 aa13.85□□□□□ -0.19
Gm42827-201ENSMUST00000197058 Zranb1Q7M760 708 aa13.83□□□□□ -0.2
Gm42827-201ENSMUST00000197058 Atad2Q8CDM1 1040 aa13.82□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms