RNA–Protein interactions for RNA: ENSMUST00000189033.1

Gm28258-201, mousemouse

TSL 3 BASIC

Gene Gm28258, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28258-201ENSMUST00000189033 Chic1Q8CBW7 227 aa29.55■■■□□ 2.32
Gm28258-201ENSMUST00000189033 Mapk8ip2Q9ERE9 830 aa28.44■■■□□ 2.14
Gm28258-201ENSMUST00000189033 Phf23Q8BSN5 401 aa26.56■■□□□ 1.84
Gm28258-201ENSMUST00000189033 Plppr3Q7TPB0 716 aa25.91■■□□□ 1.74
Gm28258-201ENSMUST00000189033 Gab3Q8BSM5 595 aa25.57■■□□□ 1.68
Gm28258-201ENSMUST00000189033 Senp3Q9EP97 568 aaKnown RBP24.49■■□□□ 1.51
Gm28258-201ENSMUST00000189033 Kcna4Q61423 654 aa23.81■■□□□ 1.4
Gm28258-201ENSMUST00000189033 Trap1aP19473 224 aa21.66■■□□□ 1.06
Gm28258-201ENSMUST00000189033 Hoxd11P23813 323 aa21.49■■□□□ 1.03
Gm28258-201ENSMUST00000189033 Dmrt2Q8BG36 561 aa21.31■■□□□ 1
Gm28258-201ENSMUST00000189033 Ppargc1bQ8VHJ7 1014 aa21.14■□□□□ 0.97
Gm28258-201ENSMUST00000189033 Fam163aQ8CAA5 168 aa20.99■□□□□ 0.95
Gm28258-201ENSMUST00000189033 Slc4a1apE9PX68 744 aa20.62■□□□□ 0.89
Gm28258-201ENSMUST00000189033 Znf219Q6IQX8 726 aa20.61■□□□□ 0.89
Gm28258-201ENSMUST00000189033 Chrna2Q91X60 512 aa20.46■□□□□ 0.87
Gm28258-201ENSMUST00000189033 Rsph4aQ8BYM7 716 aa20.28■□□□□ 0.84
Gm28258-201ENSMUST00000189033 Dnajc5bQ9CQ94 199 aa20.15■□□□□ 0.82
Gm28258-201ENSMUST00000189033 Atf5O70191 283 aa20.09■□□□□ 0.81
Gm28258-201ENSMUST00000189033 Ppp4r2Q0VGB7 417 aa19.99■□□□□ 0.79
Gm28258-201ENSMUST00000189033 Rimbp2Q80U40 1072 aa19.96■□□□□ 0.79
Gm28258-201ENSMUST00000189033 Hs6st3Q9QYK4 470 aa19.94■□□□□ 0.78
Gm28258-201ENSMUST00000189033 1700123L14RikQ3V2K7 440 aa19.57■□□□□ 0.72
Gm28258-201ENSMUST00000189033 ArsiQ32KI9 573 aa19.49■□□□□ 0.71
Gm28258-201ENSMUST00000189033 Akt1s1Q9D1F4 257 aa19.48■□□□□ 0.71
Gm28258-201ENSMUST00000189033 Ube2uB1AUC4 352 aa19.29■□□□□ 0.68
Gm28258-201ENSMUST00000189033 Slc34a2Q9DBP0 697 aa19.2■□□□□ 0.66
Gm28258-201ENSMUST00000189033 Fam71e1A1L3C1 212 aa19.14■□□□□ 0.65
Gm28258-201ENSMUST00000189033 Bach1P97302 739 aa19.08■□□□□ 0.64
Gm28258-201ENSMUST00000189033 Sox12Q04890 314 aa18.9■□□□□ 0.62
Gm28258-201ENSMUST00000189033 Nlrp6Q91WS2 869 aa18.84■□□□□ 0.61
Gm28258-201ENSMUST00000189033 Cdca7Q9D0M2 382 aa18.8■□□□□ 0.6
Gm28258-201ENSMUST00000189033 WdpcpQ8C456 722 aa18.68■□□□□ 0.58
Gm28258-201ENSMUST00000189033 AcrbpQ3V140 540 aa18.58■□□□□ 0.56
Gm28258-201ENSMUST00000189033 C1qtnf12Q8R2Z0 308 aa18.56■□□□□ 0.56
Gm28258-201ENSMUST00000189033 Pde4cQ3UEI1 686 aa18.48■□□□□ 0.55
Gm28258-201ENSMUST00000189033 Npm2Q80W85 207 aa18.28■□□□□ 0.52
Gm28258-201ENSMUST00000189033 Riok3Q9DBU3 519 aaKnown RBP18.24■□□□□ 0.51
Gm28258-201ENSMUST00000189033 Prm3Q62100 101 aa18.22■□□□□ 0.51
Gm28258-201ENSMUST00000189033 Rtn4Q99P72 1162 aaKnown RBP18.18■□□□□ 0.5
Gm28258-201ENSMUST00000189033 MyclP10166 368 aa18.15■□□□□ 0.5
Gm28258-201ENSMUST00000189033 Ifnlr1Q8CGK5 535 aa18.07■□□□□ 0.48
Gm28258-201ENSMUST00000189033 Trim41Q5NCC3 630 aa18.02■□□□□ 0.48
Gm28258-201ENSMUST00000189033 G430095P16RikE9Q913 147 aa18.01■□□□□ 0.47
Gm28258-201ENSMUST00000189033 Tshz2Q68FE9 1030 aa17.93■□□□□ 0.46
Gm28258-201ENSMUST00000189033 Ms4a5Q810P8 197 aa17.93■□□□□ 0.46
Gm28258-201ENSMUST00000189033 Styxl1Q9DAR2 321 aa17.86■□□□□ 0.45
Gm28258-201ENSMUST00000189033 Egfem1Q8C088 590 aa17.85■□□□□ 0.45
Gm28258-201ENSMUST00000189033 Zbtb7aO88939 569 aaKnown RBP17.82■□□□□ 0.44
Gm28258-201ENSMUST00000189033 Grwd1Q810D6 446 aaKnown RBP17.75■□□□□ 0.43
Gm28258-201ENSMUST00000189033 Zbtb12Q9Z150 459 aa17.69■□□□□ 0.42
Gm28258-201ENSMUST00000189033 Ehmt2Q9Z148 1263 aaKnown RBP17.68■□□□□ 0.42
Gm28258-201ENSMUST00000189033 Rnf216P58283 853 aa17.57■□□□□ 0.4
Gm28258-201ENSMUST00000189033 Znf704Q9ERQ3 566 aa17.51■□□□□ 0.39
Gm28258-201ENSMUST00000189033 Gtpbp6Q3U6U5 514 aa17.48■□□□□ 0.39
Gm28258-201ENSMUST00000189033 Abcb7Q61102 752 aaKnown RBP17.45■□□□□ 0.38
Gm28258-201ENSMUST00000189033 Slc4a5E9Q3M5 1116 aa17.43■□□□□ 0.38
Gm28258-201ENSMUST00000189033 Fbln2P37889 1221 aa17.32■□□□□ 0.36
Gm28258-201ENSMUST00000189033 Nkx1-1G3UXB3 402 aa17.23■□□□□ 0.35
Gm28258-201ENSMUST00000189033 MpndQ3TV65 487 aa17.22■□□□□ 0.35
Gm28258-201ENSMUST00000189033 Npm3Q9CPP0 175 aaKnown RBP17.19■□□□□ 0.34
Gm28258-201ENSMUST00000189033 Ecm2Q5FW85 670 aa17.18■□□□□ 0.34
Gm28258-201ENSMUST00000189033 Tcf3P15806 651 aa17.13■□□□□ 0.33
Gm28258-201ENSMUST00000189033 Skida1Q80YR3 822 aa17.03■□□□□ 0.32
Gm28258-201ENSMUST00000189033 Ppp1r37Q8BKR5 712 aa16.88■□□□□ 0.29
Gm28258-201ENSMUST00000189033 Prdm10Q3UTQ7 1184 aa16.87■□□□□ 0.29
Gm28258-201ENSMUST00000189033 Lrrc43Q3V0L5 667 aa16.61■□□□□ 0.25
Gm28258-201ENSMUST00000189033 Jarid2Q62315 1234 aa16.51■□□□□ 0.23
Gm28258-201ENSMUST00000189033 Pitpnm1O35954 1243 aa16.45■□□□□ 0.22
Gm28258-201ENSMUST00000189033 Kcnn1Q9EQR3 537 aa16.39■□□□□ 0.21
Gm28258-201ENSMUST00000189033 CatipB9EKE5 520 aa16.33■□□□□ 0.2
Gm28258-201ENSMUST00000189033 Trim35Q8C006 501 aa16.31■□□□□ 0.2
Gm28258-201ENSMUST00000189033 MycnP03966 462 aaKnown RBP16.3■□□□□ 0.2
Gm28258-201ENSMUST00000189033 GapdhsQ64467 440 aa16.29■□□□□ 0.2
Gm28258-201ENSMUST00000189033 Cadps2Q8BYR5 1297 aa16.29■□□□□ 0.2
Gm28258-201ENSMUST00000189033 Prr29B1ARI9 187 aa16.27■□□□□ 0.2
Gm28258-201ENSMUST00000189033 Spock2Q9ER58 423 aa16.25■□□□□ 0.19
Gm28258-201ENSMUST00000189033 Gm35339A0A140LHH9 1649 aa16.25■□□□□ 0.19
Gm28258-201ENSMUST00000189033 Hnrnpul2Q00PI9 745 aaKnown RBP16.24■□□□□ 0.19
Gm28258-201ENSMUST00000189033 Znf703P0CL69 594 aa16.22■□□□□ 0.19
Gm28258-201ENSMUST00000189033 Ildr2B5TVM2 661 aa16.19■□□□□ 0.18
Gm28258-201ENSMUST00000189033 Nyap1Q6PFX7 833 aa16.19■□□□□ 0.18
Gm28258-201ENSMUST00000189033 Ppp6r1Q7TSI3 856 aa16.18■□□□□ 0.18
Gm28258-201ENSMUST00000189033 Kank3Q9Z1P7 791 aa16.17■□□□□ 0.18
Gm28258-201ENSMUST00000189033 Clcn6O35454 870 aa16.15■□□□□ 0.18
Gm28258-201ENSMUST00000189033 Sra1Q80VJ2 232 aa16.15■□□□□ 0.18
Gm28258-201ENSMUST00000189033 Hdac5Q9Z2V6 1113 aa16.13■□□□□ 0.17
Gm28258-201ENSMUST00000189033 Pip4p2Q9CZX7 257 aa16.08■□□□□ 0.16
Gm28258-201ENSMUST00000189033 Fam117bQ3U3E2 584 aa16.01■□□□□ 0.15
Gm28258-201ENSMUST00000189033 Pde4dQ01063 747 aa16■□□□□ 0.15
Gm28258-201ENSMUST00000189033 Repin1Q5U4E2 545 aa15.98■□□□□ 0.15
Gm28258-201ENSMUST00000189033 Ferd3lQ923Z4 168 aa15.94■□□□□ 0.14
Gm28258-201ENSMUST00000189033 SnphQ80U23 495 aa15.91■□□□□ 0.14
Gm28258-201ENSMUST00000189033 Zbtb22Q9Z0G7 638 aa15.9■□□□□ 0.14
Gm28258-201ENSMUST00000189033 Gm13697A2AK42 830 aa15.89■□□□□ 0.13
Gm28258-201ENSMUST00000189033 Cacnb1Q8R3Z5 597 aa15.86■□□□□ 0.13
Gm28258-201ENSMUST00000189033 NischQ80TM9 1593 aa15.85■□□□□ 0.13
Gm28258-201ENSMUST00000189033 Zbtb7bQ64321 544 aa15.85■□□□□ 0.13
Gm28258-201ENSMUST00000189033 TimelessQ9R1X4 1197 aa15.81■□□□□ 0.12
Gm28258-201ENSMUST00000189033 Slc4a2P13808 1237 aaKnown RBP15.75■□□□□ 0.11
Gm28258-201ENSMUST00000189033 Pdap1Q3UHX2 181 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 71.2 ms