RNA–Protein interactions for RNA: ENSMUST00000181617.1

Gm17540-201, mousemouse

TSL 1 (best) BASIC

Gene Gm17540, Length 1,528 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17540-201ENSMUST00000181617 Chic1Q8CBW7 227 aa31.16■■■□□ 2.58
Gm17540-201ENSMUST00000181617 Mapk8ip2Q9ERE9 830 aa29.95■■■□□ 2.38
Gm17540-201ENSMUST00000181617 Phf23Q8BSN5 401 aa28.18■■■□□ 2.1
Gm17540-201ENSMUST00000181617 Plppr3Q7TPB0 716 aa27.46■■□□□ 1.99
Gm17540-201ENSMUST00000181617 Gab3Q8BSM5 595 aa27.02■■□□□ 1.92
Gm17540-201ENSMUST00000181617 Senp3Q9EP97 568 aaKnown RBP25.97■■□□□ 1.75
Gm17540-201ENSMUST00000181617 Kcna4Q61423 654 aa25.47■■□□□ 1.67
Gm17540-201ENSMUST00000181617 Trap1aP19473 224 aa22.85■■□□□ 1.25
Gm17540-201ENSMUST00000181617 Dmrt2Q8BG36 561 aa22.76■■□□□ 1.23
Gm17540-201ENSMUST00000181617 Ppargc1bQ8VHJ7 1014 aa22.76■■□□□ 1.23
Gm17540-201ENSMUST00000181617 Hoxd11P23813 323 aa22.7■■□□□ 1.22
Gm17540-201ENSMUST00000181617 Fam163aQ8CAA5 168 aa22■■□□□ 1.11
Gm17540-201ENSMUST00000181617 Slc4a1apE9PX68 744 aa21.94■■□□□ 1.1
Gm17540-201ENSMUST00000181617 Znf219Q6IQX8 726 aa21.68■■□□□ 1.06
Gm17540-201ENSMUST00000181617 Chrna2Q91X60 512 aa21.58■■□□□ 1.04
Gm17540-201ENSMUST00000181617 Atf5O70191 283 aa21.54■■□□□ 1.04
Gm17540-201ENSMUST00000181617 Rsph4aQ8BYM7 716 aa21.36■■□□□ 1.01
Gm17540-201ENSMUST00000181617 Dnajc5bQ9CQ94 199 aa21.26■□□□□ 0.99
Gm17540-201ENSMUST00000181617 Ppp4r2Q0VGB7 417 aa21.18■□□□□ 0.98
Gm17540-201ENSMUST00000181617 Hs6st3Q9QYK4 470 aa21.14■□□□□ 0.97
Gm17540-201ENSMUST00000181617 Rimbp2Q80U40 1072 aa21.13■□□□□ 0.97
Gm17540-201ENSMUST00000181617 Ube2uB1AUC4 352 aa20.86■□□□□ 0.93
Gm17540-201ENSMUST00000181617 1700123L14RikQ3V2K7 440 aa20.84■□□□□ 0.93
Gm17540-201ENSMUST00000181617 Fam71e1A1L3C1 212 aa20.54■□□□□ 0.88
Gm17540-201ENSMUST00000181617 Akt1s1Q9D1F4 257 aa20.48■□□□□ 0.87
Gm17540-201ENSMUST00000181617 ArsiQ32KI9 573 aa20.37■□□□□ 0.85
Gm17540-201ENSMUST00000181617 Bach1P97302 739 aa20.32■□□□□ 0.84
Gm17540-201ENSMUST00000181617 Slc34a2Q9DBP0 697 aa20.22■□□□□ 0.83
Gm17540-201ENSMUST00000181617 Nlrp6Q91WS2 869 aa20.13■□□□□ 0.81
Gm17540-201ENSMUST00000181617 Cdca7Q9D0M2 382 aa20.07■□□□□ 0.8
Gm17540-201ENSMUST00000181617 Sox12Q04890 314 aa19.89■□□□□ 0.77
Gm17540-201ENSMUST00000181617 AcrbpQ3V140 540 aa19.88■□□□□ 0.77
Gm17540-201ENSMUST00000181617 Pde4cQ3UEI1 686 aa19.86■□□□□ 0.77
Gm17540-201ENSMUST00000181617 WdpcpQ8C456 722 aa19.81■□□□□ 0.76
Gm17540-201ENSMUST00000181617 C1qtnf12Q8R2Z0 308 aa19.74■□□□□ 0.75
Gm17540-201ENSMUST00000181617 Riok3Q9DBU3 519 aaKnown RBP19.45■□□□□ 0.7
Gm17540-201ENSMUST00000181617 Rtn4Q99P72 1162 aaKnown RBP19.38■□□□□ 0.69
Gm17540-201ENSMUST00000181617 Prm3Q62100 101 aa19.36■□□□□ 0.69
Gm17540-201ENSMUST00000181617 Npm2Q80W85 207 aa19.35■□□□□ 0.69
Gm17540-201ENSMUST00000181617 Tshz2Q68FE9 1030 aa19.32■□□□□ 0.68
Gm17540-201ENSMUST00000181617 MyclP10166 368 aa19.29■□□□□ 0.68
Gm17540-201ENSMUST00000181617 Ms4a5Q810P8 197 aa19.26■□□□□ 0.67
Gm17540-201ENSMUST00000181617 Ehmt2Q9Z148 1263 aaKnown RBP19.22■□□□□ 0.67
Gm17540-201ENSMUST00000181617 Styxl1Q9DAR2 321 aa19.07■□□□□ 0.64
Gm17540-201ENSMUST00000181617 G430095P16RikE9Q913 147 aa19.06■□□□□ 0.64
Gm17540-201ENSMUST00000181617 Trim41Q5NCC3 630 aa19.04■□□□□ 0.64
Gm17540-201ENSMUST00000181617 Ifnlr1Q8CGK5 535 aa18.95■□□□□ 0.62
Gm17540-201ENSMUST00000181617 Zbtb7aO88939 569 aaKnown RBP18.87■□□□□ 0.61
Gm17540-201ENSMUST00000181617 Egfem1Q8C088 590 aa18.83■□□□□ 0.6
Gm17540-201ENSMUST00000181617 Grwd1Q810D6 446 aaKnown RBP18.66■□□□□ 0.58
Gm17540-201ENSMUST00000181617 Zbtb12Q9Z150 459 aa18.59■□□□□ 0.57
Gm17540-201ENSMUST00000181617 Abcb7Q61102 752 aaKnown RBP18.54■□□□□ 0.56
Gm17540-201ENSMUST00000181617 Ecm2Q5FW85 670 aa18.52■□□□□ 0.56
Gm17540-201ENSMUST00000181617 Gtpbp6Q3U6U5 514 aa18.46■□□□□ 0.55
Gm17540-201ENSMUST00000181617 Rnf216P58283 853 aa18.42■□□□□ 0.54
Gm17540-201ENSMUST00000181617 Fbln2P37889 1221 aa18.37■□□□□ 0.53
Gm17540-201ENSMUST00000181617 Znf704Q9ERQ3 566 aa18.36■□□□□ 0.53
Gm17540-201ENSMUST00000181617 MpndQ3TV65 487 aa18.34■□□□□ 0.53
Gm17540-201ENSMUST00000181617 Tcf3P15806 651 aa18.31■□□□□ 0.52
Gm17540-201ENSMUST00000181617 Npm3Q9CPP0 175 aaKnown RBP18.31■□□□□ 0.52
Gm17540-201ENSMUST00000181617 Prdm10Q3UTQ7 1184 aa18.28■□□□□ 0.52
Gm17540-201ENSMUST00000181617 Slc4a5E9Q3M5 1116 aa18.25■□□□□ 0.51
Gm17540-201ENSMUST00000181617 Nkx1-1G3UXB3 402 aa18.22■□□□□ 0.51
Gm17540-201ENSMUST00000181617 Ppp1r37Q8BKR5 712 aa18.09■□□□□ 0.49
Gm17540-201ENSMUST00000181617 Skida1Q80YR3 822 aa17.93■□□□□ 0.46
Gm17540-201ENSMUST00000181617 Lrrc43Q3V0L5 667 aa17.66■□□□□ 0.42
Gm17540-201ENSMUST00000181617 Jarid2Q62315 1234 aa17.58■□□□□ 0.41
Gm17540-201ENSMUST00000181617 Ppp6r1Q7TSI3 856 aa17.47■□□□□ 0.39
Gm17540-201ENSMUST00000181617 Pitpnm1O35954 1243 aa17.42■□□□□ 0.38
Gm17540-201ENSMUST00000181617 CatipB9EKE5 520 aa17.4■□□□□ 0.38
Gm17540-201ENSMUST00000181617 MycnP03966 462 aaKnown RBP17.33■□□□□ 0.37
Gm17540-201ENSMUST00000181617 Spock2Q9ER58 423 aa17.33■□□□□ 0.37
Gm17540-201ENSMUST00000181617 Trim35Q8C006 501 aa17.31■□□□□ 0.36
Gm17540-201ENSMUST00000181617 Cadps2Q8BYR5 1297 aa17.23■□□□□ 0.35
Gm17540-201ENSMUST00000181617 Sra1Q80VJ2 232 aa17.2■□□□□ 0.34
Gm17540-201ENSMUST00000181617 Repin1Q5U4E2 545 aa17.15■□□□□ 0.34
Gm17540-201ENSMUST00000181617 Zbtb22Q9Z0G7 638 aa17.14■□□□□ 0.33
Gm17540-201ENSMUST00000181617 Fam117bQ3U3E2 584 aa17.13■□□□□ 0.33
Gm17540-201ENSMUST00000181617 Nyap1Q6PFX7 833 aa17.13■□□□□ 0.33
Gm17540-201ENSMUST00000181617 Pde4dQ01063 747 aa17.11■□□□□ 0.33
Gm17540-201ENSMUST00000181617 Kcnn1Q9EQR3 537 aa17.11■□□□□ 0.33
Gm17540-201ENSMUST00000181617 Hdac5Q9Z2V6 1113 aa17.09■□□□□ 0.33
Gm17540-201ENSMUST00000181617 Hnrnpul2Q00PI9 745 aaKnown RBP17.06■□□□□ 0.32
Gm17540-201ENSMUST00000181617 Ferd3lQ923Z4 168 aa17.06■□□□□ 0.32
Gm17540-201ENSMUST00000181617 Prr29B1ARI9 187 aa17.04■□□□□ 0.32
Gm17540-201ENSMUST00000181617 Kank3Q9Z1P7 791 aa17.04■□□□□ 0.32
Gm17540-201ENSMUST00000181617 Prdm16A2A935 1275 aa17.01■□□□□ 0.31
Gm17540-201ENSMUST00000181617 Znf703P0CL69 594 aa17■□□□□ 0.31
Gm17540-201ENSMUST00000181617 Ildr2B5TVM2 661 aa16.98■□□□□ 0.31
Gm17540-201ENSMUST00000181617 Pip4p2Q9CZX7 257 aa16.97■□□□□ 0.31
Gm17540-201ENSMUST00000181617 TimelessQ9R1X4 1197 aa16.97■□□□□ 0.31
Gm17540-201ENSMUST00000181617 Slc4a2P13808 1237 aaKnown RBP16.96■□□□□ 0.31
Gm17540-201ENSMUST00000181617 Skap1Q3UUV5 355 aa16.94■□□□□ 0.3
Gm17540-201ENSMUST00000181617 Zbtb7bQ64321 544 aa16.86■□□□□ 0.29
Gm17540-201ENSMUST00000181617 GapdhsQ64467 440 aa16.86■□□□□ 0.29
Gm17540-201ENSMUST00000181617 Gm13697A2AK42 830 aa16.79■□□□□ 0.28
Gm17540-201ENSMUST00000181617 Taok2Q6ZQ29 1240 aa16.78■□□□□ 0.28
Gm17540-201ENSMUST00000181617 PygbQ8CI94 843 aaKnown RBP16.78■□□□□ 0.28
Gm17540-201ENSMUST00000181617 Clcn6O35454 870 aa16.76■□□□□ 0.27
Gm17540-201ENSMUST00000181617 SnphQ80U23 495 aa16.76■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 8 ms