RNA–Protein interactions for RNA: ENSMUST00000174287.1

Neat1-202, mousemouse

TSL 1 (best) BASIC

Gene Neat1, Length 3,004 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Neat1-202ENSMUST00000174287 Gm35339A0A140LHH9 1649 aa21.32■■□□□ 1
Neat1-202ENSMUST00000174287 Abcc9P70170 1546 aa20.6■□□□□ 0.89
Neat1-202ENSMUST00000174287 NischQ80TM9 1593 aa20.55■□□□□ 0.88
Neat1-202ENSMUST00000174287 Abcc8B2RUS7 1588 aa20.15■□□□□ 0.82
Neat1-202ENSMUST00000174287 Rpgrip1Q9EPQ2 1331 aa19.98■□□□□ 0.79
Neat1-202ENSMUST00000174287 ScribQ80U72 1612 aa19.93■□□□□ 0.78
Neat1-202ENSMUST00000174287 Rhox8Q6VSS7 320 aa19.56■□□□□ 0.72
Neat1-202ENSMUST00000174287 Rtl1Q7M732 1744 aa19.5■□□□□ 0.71
Neat1-202ENSMUST00000174287 Dnajc5bQ9CQ94 199 aa19.43■□□□□ 0.7
Neat1-202ENSMUST00000174287 Acin1Q9JIX8 1338 aaKnown RBP19.42■□□□□ 0.7
Neat1-202ENSMUST00000174287 Ccdc180J3QNE4 1664 aa19.42■□□□□ 0.7
Neat1-202ENSMUST00000174287 NacadQ5SWP3 1504 aa19.23■□□□□ 0.67
Neat1-202ENSMUST00000174287 Pcgf6Q99NA9 353 aa19.19■□□□□ 0.66
Neat1-202ENSMUST00000174287 Ehmt2Q9Z148 1263 aaKnown RBP19.13■□□□□ 0.65
Neat1-202ENSMUST00000174287 Kdm5dQ62240 1548 aa19.06■□□□□ 0.64
Neat1-202ENSMUST00000174287 Sycp2Q9CUU3 1500 aa18.89■□□□□ 0.61
Neat1-202ENSMUST00000174287 Zcchc6Q5BLK4 1491 aaKnown RBP18.79■□□□□ 0.6
Neat1-202ENSMUST00000174287 BicraF8VPZ9 1578 aa18.75■□□□□ 0.59
Neat1-202ENSMUST00000174287 Dcaf1Q80TR8 1506 aa18.69■□□□□ 0.58
Neat1-202ENSMUST00000174287 Supt5hO55201 1082 aaKnown RBP18.66■□□□□ 0.58
Neat1-202ENSMUST00000174287 Dnajc5P60904 198 aa18.63■□□□□ 0.57
Neat1-202ENSMUST00000174287 Thoc2B1AZI6 1594 aaKnown RBP18.63■□□□□ 0.57
Neat1-202ENSMUST00000174287 Trim41Q5NCC3 630 aa18.57■□□□□ 0.56
Neat1-202ENSMUST00000174287 Neurod1Q60867 357 aa18.55■□□□□ 0.56
Neat1-202ENSMUST00000174287 HrcG5E8J6 738 aa18.5■□□□□ 0.55
Neat1-202ENSMUST00000174287 Pds5bQ4VA53 1446 aaKnown RBP18.45■□□□□ 0.54
Neat1-202ENSMUST00000174287 Las1lA2BE28 776 aaKnown RBP18.25■□□□□ 0.51
Neat1-202ENSMUST00000174287 Cc2d2aQ8CFW7 1633 aa18.24■□□□□ 0.51
Neat1-202ENSMUST00000174287 1700123L14RikQ3V2K7 440 aa18.11■□□□□ 0.49
Neat1-202ENSMUST00000174287 Zeb1Q64318 1117 aa18.09■□□□□ 0.49
Neat1-202ENSMUST00000174287 Ccdc136Q3TVA9 1136 aa18.09■□□□□ 0.49
Neat1-202ENSMUST00000174287 Atad2bE9Q166 1460 aaKnown RBP18.08■□□□□ 0.49
Neat1-202ENSMUST00000174287 Fam135aQ6NS59 1506 aa18.03■□□□□ 0.48
Neat1-202ENSMUST00000174287 Ercc6F8VPZ5 1481 aa18.01■□□□□ 0.47
Neat1-202ENSMUST00000174287 Csrnp3P59055 597 aa17.97■□□□□ 0.47
Neat1-202ENSMUST00000174287 Cngb1E1AZ71 1325 aa17.97■□□□□ 0.47
Neat1-202ENSMUST00000174287 Baz1bQ9Z277 1479 aa17.93■□□□□ 0.46
Neat1-202ENSMUST00000174287 Sall2Q9QX96 1004 aa17.93■□□□□ 0.46
Neat1-202ENSMUST00000174287 Anks4bQ8K3X6 423 aa17.91■□□□□ 0.46
Neat1-202ENSMUST00000174287 Rb1cc1Q9ESK9 1588 aa17.87■□□□□ 0.45
Neat1-202ENSMUST00000174287 CenpbP27790 599 aa17.83■□□□□ 0.45
Neat1-202ENSMUST00000174287 NefmP08553 848 aa17.77■□□□□ 0.44
Neat1-202ENSMUST00000174287 Myt1Q8CFC2 1127 aa17.76■□□□□ 0.43
Neat1-202ENSMUST00000174287 Smarca2Q6DIC0 1577 aa17.75■□□□□ 0.43
Neat1-202ENSMUST00000174287 Cep164Q5DU05 1446 aa17.71■□□□□ 0.43
Neat1-202ENSMUST00000174287 Crybg2B7ZCC2 1516 aa17.7■□□□□ 0.42
Neat1-202ENSMUST00000174287 Phldb1Q6PDH0 1371 aaKnown RBP17.69■□□□□ 0.42
Neat1-202ENSMUST00000174287 Mier1Q5UAK0 511 aa17.68■□□□□ 0.42
Neat1-202ENSMUST00000174287 Baz1aO88379 1555 aa17.65■□□□□ 0.42
Neat1-202ENSMUST00000174287 Aplp2Q06335 707 aa17.64■□□□□ 0.41
Neat1-202ENSMUST00000174287 Wdr62Q3U3T8 1523 aa17.59■□□□□ 0.41
Neat1-202ENSMUST00000174287 Iqgap2Q3UQ44 1575 aa17.59■□□□□ 0.41
Neat1-202ENSMUST00000174287 Smarca4Q3TKT4 1613 aaKnown RBP17.58■□□□□ 0.4
Neat1-202ENSMUST00000174287 Mrc2Q64449 1479 aa17.57■□□□□ 0.4
Neat1-202ENSMUST00000174287 Frmpd1A2AKB4 1549 aa17.55■□□□□ 0.4
Neat1-202ENSMUST00000174287 Gm38655A0A286YDK6 273 aa17.53■□□□□ 0.4
Neat1-202ENSMUST00000174287 Cdk11bP24788 784 aaKnown RBP17.51■□□□□ 0.39
Neat1-202ENSMUST00000174287 Ubl4bQ9CQ84 188 aa17.51■□□□□ 0.39
Neat1-202ENSMUST00000174287 Wdr66E9Q743 1299 aa17.49■□□□□ 0.39
Neat1-202ENSMUST00000174287 DiexfQ8BTT6 772 aaKnown RBP17.48■□□□□ 0.39
Neat1-202ENSMUST00000174287 Aebp2Q9Z248 504 aaKnown RBP17.47■□□□□ 0.39
Neat1-202ENSMUST00000174287 Gab3Q8BSM5 595 aa17.46■□□□□ 0.39
Neat1-202ENSMUST00000174287 Nop58Q6DFW4 536 aaKnown RBP17.46■□□□□ 0.39
Neat1-202ENSMUST00000174287 Ppargc1bQ8VHJ7 1014 aa17.37■□□□□ 0.37
Neat1-202ENSMUST00000174287 Chic1Q8CBW7 227 aa17.34■□□□□ 0.37
Neat1-202ENSMUST00000174287 Shroom2A2ALU4 1481 aa17.34■□□□□ 0.37
Neat1-202ENSMUST00000174287 ClspnQ80YR7 1315 aa17.31■□□□□ 0.36
Neat1-202ENSMUST00000174287 Bcl11aQ9QYE3 773 aa17.3■□□□□ 0.36
Neat1-202ENSMUST00000174287 Unc13aQ4KUS2 1712 aa17.3■□□□□ 0.36
Neat1-202ENSMUST00000174287 Rsf1E9PWW9 1441 aaKnown RBP17.28■□□□□ 0.36
Neat1-202ENSMUST00000174287 Col17a1Q07563 1470 aa17.25■□□□□ 0.35
Neat1-202ENSMUST00000174287 Lrriq1Q0P5X1 1673 aa17.25■□□□□ 0.35
Neat1-202ENSMUST00000174287 Cecr2E9Q2Z1 1453 aa17.19■□□□□ 0.34
Neat1-202ENSMUST00000174287 Fam71e1A1L3C1 212 aa17.16■□□□□ 0.34
Neat1-202ENSMUST00000174287 UbtfP25976 765 aaKnown RBP17.14■□□□□ 0.33
Neat1-202ENSMUST00000174287 Mapk8ip2Q9ERE9 830 aa17.07■□□□□ 0.32
Neat1-202ENSMUST00000174287 Ccdc88bQ4QRL3 1481 aa17.05■□□□□ 0.32
Neat1-202ENSMUST00000174287 SafbD3YXK2 937 aaKnown RBP17.05■□□□□ 0.32
Neat1-202ENSMUST00000174287 Eif4g3Q80XI3 1579 aaKnown RBP17.03■□□□□ 0.32
Neat1-202ENSMUST00000174287 Hnrnpul2Q00PI9 745 aaKnown RBP17■□□□□ 0.31
Neat1-202ENSMUST00000174287 TonslQ6NZL6 1363 aa16.97■□□□□ 0.31
Neat1-202ENSMUST00000174287 Top2bQ64511 1612 aa16.97■□□□□ 0.31
Neat1-202ENSMUST00000174287 Pabpn1Q8CCS6 302 aaKnown RBP16.95■□□□□ 0.3
Neat1-202ENSMUST00000174287 Ifnlr1Q8CGK5 535 aa16.91■□□□□ 0.3
Neat1-202ENSMUST00000174287 PrkcshO08795 521 aa16.9■□□□□ 0.3
Neat1-202ENSMUST00000174287 Zcchc11B2RX14 1644 aaKnown RBP16.89■□□□□ 0.29
Neat1-202ENSMUST00000174287 Kif21aQ9QXL2 1672 aa16.88■□□□□ 0.29
Neat1-202ENSMUST00000174287 Tnnt3Q9QZ47 272 aa16.85■□□□□ 0.29
Neat1-202ENSMUST00000174287 Ap3b1Q9Z1T1 1105 aa16.82■□□□□ 0.28
Neat1-202ENSMUST00000174287 Cux2P70298 1426 aa16.8■□□□□ 0.28
Neat1-202ENSMUST00000174287 Golga3P55937 1487 aa16.8■□□□□ 0.28
Neat1-202ENSMUST00000174287 Pcdh10E9PXQ7 1057 aa16.78■□□□□ 0.28
Neat1-202ENSMUST00000174287 Brd4Q9ESU6 1400 aaKnown RBP16.74■□□□□ 0.27
Neat1-202ENSMUST00000174287 Cttnbp2B9EJA2 1648 aa16.71■□□□□ 0.27
Neat1-202ENSMUST00000174287 Arhgef5E9Q7D5 1581 aa16.71■□□□□ 0.27
Neat1-202ENSMUST00000174287 Anp32aO35381 247 aa16.7■□□□□ 0.26
Neat1-202ENSMUST00000174287 CftrP26361 1476 aa16.67■□□□□ 0.26
Neat1-202ENSMUST00000174287 Synj1Q8CHC4 1574 aa16.67■□□□□ 0.26
Neat1-202ENSMUST00000174287 Pelp1Q9DBD5 1123 aaKnown RBP16.64■□□□□ 0.25
Neat1-202ENSMUST00000174287 Plb1Q3TTY0 1478 aa16.6■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms