RNA–Protein interactions for RNA: ENSMUST00000167824.2

Rab3c-201, Transcript of Ras-related protein Rab-3C, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rab3c, Length 8,444 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3c-201ENSMUST00000167824 NischQ80TM9 1593 aa11.38□□□□□ -0.59
Rab3c-201ENSMUST00000167824 Gm35339A0A140LHH9 1649 aa11.03□□□□□ -0.64
Rab3c-201ENSMUST00000167824 Rhox8Q6VSS7 320 aa10.99□□□□□ -0.65
Rab3c-201ENSMUST00000167824 Abcc9P70170 1546 aa10.97□□□□□ -0.65
Rab3c-201ENSMUST00000167824 Ube2uB1AUC4 352 aa10.7□□□□□ -0.7
Rab3c-201ENSMUST00000167824 Abcc8B2RUS7 1588 aa10.65□□□□□ -0.7
Rab3c-201ENSMUST00000167824 Rpgrip1Q9EPQ2 1331 aa10.6□□□□□ -0.71
Rab3c-201ENSMUST00000167824 DiexfQ8BTT6 772 aaKnown RBP10.46□□□□□ -0.73
Rab3c-201ENSMUST00000167824 Myt1Q8CFC2 1127 aa10.44□□□□□ -0.74
Rab3c-201ENSMUST00000167824 NacadQ5SWP3 1504 aa10.38□□□□□ -0.75
Rab3c-201ENSMUST00000167824 Esf1Q3V1V3 845 aaKnown RBP10.3□□□□□ -0.76
Rab3c-201ENSMUST00000167824 CatipB9EKE5 520 aa10.28□□□□□ -0.76
Rab3c-201ENSMUST00000167824 Amer1Q7TS75 1132 aa10.27□□□□□ -0.77
Rab3c-201ENSMUST00000167824 Las1lA2BE28 776 aaKnown RBP10.11□□□□□ -0.79
Rab3c-201ENSMUST00000167824 Ttbk1Q6PCN3 1308 aa10.11□□□□□ -0.79
Rab3c-201ENSMUST00000167824 Trim41Q5NCC3 630 aa10.11□□□□□ -0.79
Rab3c-201ENSMUST00000167824 Rb1cc1Q9ESK9 1588 aa10.1□□□□□ -0.79
Rab3c-201ENSMUST00000167824 Ercc6F8VPZ5 1481 aa10.08□□□□□ -0.8
Rab3c-201ENSMUST00000167824 Zcchc6Q5BLK4 1491 aaKnown RBP10.08□□□□□ -0.8
Rab3c-201ENSMUST00000167824 Pds5bQ4VA53 1446 aaKnown RBP10.06□□□□□ -0.8
Rab3c-201ENSMUST00000167824 Kdm5dQ62240 1548 aa10.03□□□□□ -0.8
Rab3c-201ENSMUST00000167824 Dcaf1Q80TR8 1506 aa10□□□□□ -0.81
Rab3c-201ENSMUST00000167824 ScribQ80U72 1612 aa9.98□□□□□ -0.81
Rab3c-201ENSMUST00000167824 Rtl1Q7M732 1744 aa9.94□□□□□ -0.82
Rab3c-201ENSMUST00000167824 Sycp2Q9CUU3 1500 aa9.92□□□□□ -0.82
Rab3c-201ENSMUST00000167824 Ubl4bQ9CQ84 188 aa9.92□□□□□ -0.82
Rab3c-201ENSMUST00000167824 Npm1Q61937 292 aaKnown RBP9.9□□□□□ -0.82
Rab3c-201ENSMUST00000167824 Zeb1Q64318 1117 aa9.88□□□□□ -0.83
Rab3c-201ENSMUST00000167824 Ccdc136Q3TVA9 1136 aa9.87□□□□□ -0.83
Rab3c-201ENSMUST00000167824 Cngb1E1AZ71 1325 aa9.84□□□□□ -0.83
Rab3c-201ENSMUST00000167824 Ccdc180J3QNE4 1664 aa9.83□□□□□ -0.84
Rab3c-201ENSMUST00000167824 Baz1aO88379 1555 aa9.79□□□□□ -0.84
Rab3c-201ENSMUST00000167824 Ehmt2Q9Z148 1263 aaKnown RBP9.78□□□□□ -0.84
Rab3c-201ENSMUST00000167824 Brd4Q9ESU6 1400 aaKnown RBP9.75□□□□□ -0.85
Rab3c-201ENSMUST00000167824 Crybg2B7ZCC2 1516 aa9.74□□□□□ -0.85
Rab3c-201ENSMUST00000167824 Atad2bE9Q166 1460 aaKnown RBP9.72□□□□□ -0.85
Rab3c-201ENSMUST00000167824 CenpbP27790 599 aa9.72□□□□□ -0.85
Rab3c-201ENSMUST00000167824 Il27Q8K3I6 234 aa9.7□□□□□ -0.86
Rab3c-201ENSMUST00000167824 Baz1bQ9Z277 1479 aa9.7□□□□□ -0.86
Rab3c-201ENSMUST00000167824 Npm2Q80W85 207 aa9.69□□□□□ -0.86
Rab3c-201ENSMUST00000167824 Phldb1Q6PDH0 1371 aaKnown RBP9.66□□□□□ -0.86
Rab3c-201ENSMUST00000167824 Smarca2Q6DIC0 1577 aa9.65□□□□□ -0.86
Rab3c-201ENSMUST00000167824 Pelp1Q9DBD5 1123 aaKnown RBP9.64□□□□□ -0.87
Rab3c-201ENSMUST00000167824 Rsf1E9PWW9 1441 aaKnown RBP9.6□□□□□ -0.87
Rab3c-201ENSMUST00000167824 Smarca4Q3TKT4 1613 aaKnown RBP9.58□□□□□ -0.88
Rab3c-201ENSMUST00000167824 4930567H17RikQ3V0K5 233 aa9.55□□□□□ -0.88
Rab3c-201ENSMUST00000167824 Cep164Q5DU05 1446 aa9.55□□□□□ -0.88
Rab3c-201ENSMUST00000167824 Ccdc18Q640L5 1455 aa9.53□□□□□ -0.88
Rab3c-201ENSMUST00000167824 Acin1Q9JIX8 1338 aaKnown RBP9.48□□□□□ -0.89
Rab3c-201ENSMUST00000167824 Kif15Q6P9L6 1387 aa9.48□□□□□ -0.89
Rab3c-201ENSMUST00000167824 ArxO35085 564 aa9.48□□□□□ -0.89
Rab3c-201ENSMUST00000167824 Iqgap2Q3UQ44 1575 aa9.47□□□□□ -0.89
Rab3c-201ENSMUST00000167824 Cc2d2aQ8CFW7 1633 aa9.46□□□□□ -0.89
Rab3c-201ENSMUST00000167824 Pabpn1Q8CCS6 302 aaKnown RBP9.42□□□□□ -0.9
Rab3c-201ENSMUST00000167824 Mrc2Q64449 1479 aa9.42□□□□□ -0.9
Rab3c-201ENSMUST00000167824 Cdk11bP24788 784 aaKnown RBP9.41□□□□□ -0.9
Rab3c-201ENSMUST00000167824 BicraF8VPZ9 1578 aa9.4□□□□□ -0.91
Rab3c-201ENSMUST00000167824 Cttnbp2B9EJA2 1648 aa9.39□□□□□ -0.91
Rab3c-201ENSMUST00000167824 Pcgf6Q99NA9 353 aa9.38□□□□□ -0.91
Rab3c-201ENSMUST00000167824 Wdr66E9Q743 1299 aa9.37□□□□□ -0.91
Rab3c-201ENSMUST00000167824 Cux2P70298 1426 aa9.3□□□□□ -0.92
Rab3c-201ENSMUST00000167824 BccipQ9CWI3 316 aa9.3□□□□□ -0.92
Rab3c-201ENSMUST00000167824 Thoc2B1AZI6 1594 aaKnown RBP9.29□□□□□ -0.92
Rab3c-201ENSMUST00000167824 Myt1lP97500 1187 aa9.29□□□□□ -0.92
Rab3c-201ENSMUST00000167824 Fam135aQ6NS59 1506 aa9.27□□□□□ -0.93
Rab3c-201ENSMUST00000167824 Wdr62Q3U3T8 1523 aa9.25□□□□□ -0.93
Rab3c-201ENSMUST00000167824 Vsig10D3YX43 558 aa9.23□□□□□ -0.93
Rab3c-201ENSMUST00000167824 Q8BT18 775 aa9.21□□□□□ -0.93
Rab3c-201ENSMUST00000167824 Ppp1r18Q8BQ30 594 aa9.21□□□□□ -0.93
Rab3c-201ENSMUST00000167824 Ifnlr1Q8CGK5 535 aa9.21□□□□□ -0.93
Rab3c-201ENSMUST00000167824 Plekhg3Q4VAC9 1341 aa9.21□□□□□ -0.93
Rab3c-201ENSMUST00000167824 Safb2Q80YR5 991 aaKnown RBP9.2□□□□□ -0.94
Rab3c-201ENSMUST00000167824 Frmpd1A2AKB4 1549 aa9.2□□□□□ -0.94
Rab3c-201ENSMUST00000167824 Cecr2E9Q2Z1 1453 aa9.18□□□□□ -0.94
Rab3c-201ENSMUST00000167824 Dnajc5bQ9CQ94 199 aa9.18□□□□□ -0.94
Rab3c-201ENSMUST00000167824 CftrP26361 1476 aa9.18□□□□□ -0.94
Rab3c-201ENSMUST00000167824 Gab3Q8BSM5 595 aa9.17□□□□□ -0.94
Rab3c-201ENSMUST00000167824 Rtl5Q5DTT4 599 aa9.16□□□□□ -0.94
Rab3c-201ENSMUST00000167824 Gm13697A2AK42 830 aa9.16□□□□□ -0.94
Rab3c-201ENSMUST00000167824 Top2bQ64511 1612 aa9.14□□□□□ -0.95
Rab3c-201ENSMUST00000167824 Plppr3Q7TPB0 716 aa9.14□□□□□ -0.95
Rab3c-201ENSMUST00000167824 Aplp2Q06335 707 aa9.13□□□□□ -0.95
Rab3c-201ENSMUST00000167824 Bcl11aQ9QYE3 773 aa9.12□□□□□ -0.95
Rab3c-201ENSMUST00000167824 AknaQ80VW7 1404 aa9.12□□□□□ -0.95
Rab3c-201ENSMUST00000167824 Znf326O88291 580 aa9.12□□□□□ -0.95
Rab3c-201ENSMUST00000167824 NclP09405 707 aaKnown RBP9.11□□□□□ -0.95
Rab3c-201ENSMUST00000167824 Golga3P55937 1487 aa9.1□□□□□ -0.95
Rab3c-201ENSMUST00000167824 Hdac5Q9Z2V6 1113 aa9.1□□□□□ -0.95
Rab3c-201ENSMUST00000167824 LrpprcQ6PB66 1392 aaKnown RBP9.1□□□□□ -0.95
Rab3c-201ENSMUST00000167824 4933416C03RikQ3V063 378 aa9.1□□□□□ -0.95
Rab3c-201ENSMUST00000167824 Ift140E9PY46 1464 aa9.09□□□□□ -0.95
Rab3c-201ENSMUST00000167824 Znf316Q6PGE4 1016 aa9.09□□□□□ -0.95
Rab3c-201ENSMUST00000167824 Synj1Q8CHC4 1574 aa9.08□□□□□ -0.96
Rab3c-201ENSMUST00000167824 Dhx29Q6PGC1 1365 aaKnown RBP9.08□□□□□ -0.96
Rab3c-201ENSMUST00000167824 Ythdc1E9Q5K9 736 aaKnown RBP9.07□□□□□ -0.96
Rab3c-201ENSMUST00000167824 Rangap1P46061 589 aaKnown RBP9.07□□□□□ -0.96
Rab3c-201ENSMUST00000167824 Ripply1Q2WG77 201 aa9.07□□□□□ -0.96
Rab3c-201ENSMUST00000167824 Gtf3c5Q8R2T8 520 aa9.07□□□□□ -0.96
Rab3c-201ENSMUST00000167824 Zbtb7cQ8VCZ7 619 aa9.07□□□□□ -0.96
Rab3c-201ENSMUST00000167824 Urb2E9Q7L1 1524 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms