RNA–Protein interactions for RNA: ENSMUST00000117548.1

Hmgb1-ps2-201, mousemouse

BASIC

Gene Hmgb1-ps2, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps2-201ENSMUST00000117548 Chic1Q8CBW7 227 aa15.62■□□□□ 0.09
Hmgb1-ps2-201ENSMUST00000117548 Mapk8ip2Q9ERE9 830 aa14.79□□□□□ -0.04
Hmgb1-ps2-201ENSMUST00000117548 Phf23Q8BSN5 401 aa14.13□□□□□ -0.15
Hmgb1-ps2-201ENSMUST00000117548 Plppr3Q7TPB0 716 aa14.09□□□□□ -0.15
Hmgb1-ps2-201ENSMUST00000117548 Gab3Q8BSM5 595 aa13.68□□□□□ -0.22
Hmgb1-ps2-201ENSMUST00000117548 Kcna4Q61423 654 aa13.31□□□□□ -0.28
Hmgb1-ps2-201ENSMUST00000117548 Senp3Q9EP97 568 aaKnown RBP13.17□□□□□ -0.3
Hmgb1-ps2-201ENSMUST00000117548 Ppargc1bQ8VHJ7 1014 aa12.17□□□□□ -0.46
Hmgb1-ps2-201ENSMUST00000117548 Ube2uB1AUC4 352 aa12.06□□□□□ -0.48
Hmgb1-ps2-201ENSMUST00000117548 Dmrt2Q8BG36 561 aa11.95□□□□□ -0.5
Hmgb1-ps2-201ENSMUST00000117548 Slc4a1apE9PX68 744 aa11.71□□□□□ -0.53
Hmgb1-ps2-201ENSMUST00000117548 Trap1aP19473 224 aa11.59□□□□□ -0.55
Hmgb1-ps2-201ENSMUST00000117548 Hoxd11P23813 323 aa11.43□□□□□ -0.58
Hmgb1-ps2-201ENSMUST00000117548 Fam71e1A1L3C1 212 aa11.28□□□□□ -0.6
Hmgb1-ps2-201ENSMUST00000117548 Atf5O70191 283 aa11.13□□□□□ -0.63
Hmgb1-ps2-201ENSMUST00000117548 Dnajc5bQ9CQ94 199 aa11.1□□□□□ -0.63
Hmgb1-ps2-201ENSMUST00000117548 Ppp4r2Q0VGB7 417 aa10.97□□□□□ -0.65
Hmgb1-ps2-201ENSMUST00000117548 Hs6st3Q9QYK4 470 aa10.97□□□□□ -0.65
Hmgb1-ps2-201ENSMUST00000117548 1700123L14RikQ3V2K7 440 aa10.92□□□□□ -0.66
Hmgb1-ps2-201ENSMUST00000117548 Ehmt2Q9Z148 1263 aaKnown RBP10.92□□□□□ -0.66
Hmgb1-ps2-201ENSMUST00000117548 Chrna2Q91X60 512 aa10.89□□□□□ -0.67
Hmgb1-ps2-201ENSMUST00000117548 Nlrp6Q91WS2 869 aa10.86□□□□□ -0.67
Hmgb1-ps2-201ENSMUST00000117548 AcrbpQ3V140 540 aa10.84□□□□□ -0.67
Hmgb1-ps2-201ENSMUST00000117548 Pde4cQ3UEI1 686 aa10.83□□□□□ -0.68
Hmgb1-ps2-201ENSMUST00000117548 Znf219Q6IQX8 726 aa10.83□□□□□ -0.68
Hmgb1-ps2-201ENSMUST00000117548 Fam163aQ8CAA5 168 aa10.82□□□□□ -0.68
Hmgb1-ps2-201ENSMUST00000117548 Rsph4aQ8BYM7 716 aa10.75□□□□□ -0.69
Hmgb1-ps2-201ENSMUST00000117548 Cdca7Q9D0M2 382 aa10.74□□□□□ -0.69
Hmgb1-ps2-201ENSMUST00000117548 Rtn4Q99P72 1162 aaKnown RBP10.67□□□□□ -0.7
Hmgb1-ps2-201ENSMUST00000117548 Rimbp2Q80U40 1072 aa10.61□□□□□ -0.71
Hmgb1-ps2-201ENSMUST00000117548 Tshz2Q68FE9 1030 aa10.53□□□□□ -0.72
Hmgb1-ps2-201ENSMUST00000117548 Prm3Q62100 101 aa10.49□□□□□ -0.73
Hmgb1-ps2-201ENSMUST00000117548 C1qtnf12Q8R2Z0 308 aa10.39□□□□□ -0.75
Hmgb1-ps2-201ENSMUST00000117548 Npm2Q80W85 207 aa10.36□□□□□ -0.75
Hmgb1-ps2-201ENSMUST00000117548 Bach1P97302 739 aa10.35□□□□□ -0.75
Hmgb1-ps2-201ENSMUST00000117548 Ecm2Q5FW85 670 aa10.32□□□□□ -0.76
Hmgb1-ps2-201ENSMUST00000117548 Riok3Q9DBU3 519 aaKnown RBP10.32□□□□□ -0.76
Hmgb1-ps2-201ENSMUST00000117548 Prdm10Q3UTQ7 1184 aa10.3□□□□□ -0.76
Hmgb1-ps2-201ENSMUST00000117548 MyclP10166 368 aa10.27□□□□□ -0.77
Hmgb1-ps2-201ENSMUST00000117548 Styxl1Q9DAR2 321 aa10.27□□□□□ -0.77
Hmgb1-ps2-201ENSMUST00000117548 Slc34a2Q9DBP0 697 aa10.23□□□□□ -0.77
Hmgb1-ps2-201ENSMUST00000117548 Akt1s1Q9D1F4 257 aa10.21□□□□□ -0.77
Hmgb1-ps2-201ENSMUST00000117548 ArsiQ32KI9 573 aa10.16□□□□□ -0.78
Hmgb1-ps2-201ENSMUST00000117548 WdpcpQ8C456 722 aa10.15□□□□□ -0.78
Hmgb1-ps2-201ENSMUST00000117548 Sox12Q04890 314 aa10.12□□□□□ -0.79
Hmgb1-ps2-201ENSMUST00000117548 Trim41Q5NCC3 630 aa10.05□□□□□ -0.8
Hmgb1-ps2-201ENSMUST00000117548 Ms4a5Q810P8 197 aa10.01□□□□□ -0.81
Hmgb1-ps2-201ENSMUST00000117548 CatipB9EKE5 520 aa9.91□□□□□ -0.82
Hmgb1-ps2-201ENSMUST00000117548 Prdm16A2A935 1275 aa9.85□□□□□ -0.83
Hmgb1-ps2-201ENSMUST00000117548 Tcf3P15806 651 aa9.85□□□□□ -0.83
Hmgb1-ps2-201ENSMUST00000117548 Taok2Q6ZQ29 1240 aa9.81□□□□□ -0.84
Hmgb1-ps2-201ENSMUST00000117548 Arid3aQ62431 601 aa9.73□□□□□ -0.85
Hmgb1-ps2-201ENSMUST00000117548 G430095P16RikE9Q913 147 aa9.71□□□□□ -0.86
Hmgb1-ps2-201ENSMUST00000117548 Ifnlr1Q8CGK5 535 aa9.63□□□□□ -0.87
Hmgb1-ps2-201ENSMUST00000117548 Ppp1r37Q8BKR5 712 aa9.59□□□□□ -0.87
Hmgb1-ps2-201ENSMUST00000117548 MpndQ3TV65 487 aa9.58□□□□□ -0.88
Hmgb1-ps2-201ENSMUST00000117548 Npm3Q9CPP0 175 aaKnown RBP9.53□□□□□ -0.88
Hmgb1-ps2-201ENSMUST00000117548 Zbtb12Q9Z150 459 aa9.53□□□□□ -0.88
Hmgb1-ps2-201ENSMUST00000117548 Fbln2P37889 1221 aa9.52□□□□□ -0.89
Hmgb1-ps2-201ENSMUST00000117548 Ppp6r1Q7TSI3 856 aa9.5□□□□□ -0.89
Hmgb1-ps2-201ENSMUST00000117548 Zbtb7aO88939 569 aaKnown RBP9.49□□□□□ -0.89
Hmgb1-ps2-201ENSMUST00000117548 Egfem1Q8C088 590 aa9.44□□□□□ -0.9
Hmgb1-ps2-201ENSMUST00000117548 Spock2Q9ER58 423 aa9.4□□□□□ -0.9
Hmgb1-ps2-201ENSMUST00000117548 Gtpbp6Q3U6U5 514 aa9.39□□□□□ -0.91
Hmgb1-ps2-201ENSMUST00000117548 Skap1Q3UUV5 355 aa9.38□□□□□ -0.91
Hmgb1-ps2-201ENSMUST00000117548 Rnf216P58283 853 aa9.36□□□□□ -0.91
Hmgb1-ps2-201ENSMUST00000117548 Grwd1Q810D6 446 aaKnown RBP9.33□□□□□ -0.92
Hmgb1-ps2-201ENSMUST00000117548 Skida1Q80YR3 822 aa9.32□□□□□ -0.92
Hmgb1-ps2-201ENSMUST00000117548 Zbtb22Q9Z0G7 638 aa9.32□□□□□ -0.92
Hmgb1-ps2-201ENSMUST00000117548 Slc4a2P13808 1237 aaKnown RBP9.27□□□□□ -0.93
Hmgb1-ps2-201ENSMUST00000117548 Abcb7Q61102 752 aaKnown RBP9.27□□□□□ -0.93
Hmgb1-ps2-201ENSMUST00000117548 MycnP03966 462 aaKnown RBP9.25□□□□□ -0.93
Hmgb1-ps2-201ENSMUST00000117548 Lrrc43Q3V0L5 667 aa9.25□□□□□ -0.93
Hmgb1-ps2-201ENSMUST00000117548 Mkrn3Q60764 544 aa9.24□□□□□ -0.93
Hmgb1-ps2-201ENSMUST00000117548 Esf1Q3V1V3 845 aaKnown RBP9.22□□□□□ -0.93
Hmgb1-ps2-201ENSMUST00000117548 Slc24a1Q91WD8 1130 aa9.22□□□□□ -0.93
Hmgb1-ps2-201ENSMUST00000117548 Ferd3lQ923Z4 168 aa9.21□□□□□ -0.94
Hmgb1-ps2-201ENSMUST00000117548 Vsig10D3YX43 558 aa9.2□□□□□ -0.94
Hmgb1-ps2-201ENSMUST00000117548 Zeb1Q64318 1117 aa9.19□□□□□ -0.94
Hmgb1-ps2-201ENSMUST00000117548 Nkx1-1G3UXB3 402 aa9.16□□□□□ -0.94
Hmgb1-ps2-201ENSMUST00000117548 Jarid2Q62315 1234 aa9.16□□□□□ -0.94
Hmgb1-ps2-201ENSMUST00000117548 TimelessQ9R1X4 1197 aa9.15□□□□□ -0.94
Hmgb1-ps2-201ENSMUST00000117548 Noa1Q9JJG9 693 aaKnown RBP9.1□□□□□ -0.95
Hmgb1-ps2-201ENSMUST00000117548 Fam117bQ3U3E2 584 aa9.08□□□□□ -0.96
Hmgb1-ps2-201ENSMUST00000117548 Repin1Q5U4E2 545 aa9.07□□□□□ -0.96
Hmgb1-ps2-201ENSMUST00000117548 P3h3Q8CG70 732 aa9.06□□□□□ -0.96
Hmgb1-ps2-201ENSMUST00000117548 Rgl2Q61193 778 aa9.05□□□□□ -0.96
Hmgb1-ps2-201ENSMUST00000117548 Dnajc5P60904 198 aa9.04□□□□□ -0.96
Hmgb1-ps2-201ENSMUST00000117548 Znf704Q9ERQ3 566 aa9.04□□□□□ -0.96
Hmgb1-ps2-201ENSMUST00000117548 Spryd3E9Q9B3 442 aa9.03□□□□□ -0.96
Hmgb1-ps2-201ENSMUST00000117548 Ubap1lG3UW59 384 aa9.03□□□□□ -0.96
Hmgb1-ps2-201ENSMUST00000117548 Hdac5Q9Z2V6 1113 aa9.03□□□□□ -0.96
Hmgb1-ps2-201ENSMUST00000117548 Rsph6aQ8CDR2 708 aa9.01□□□□□ -0.97
Hmgb1-ps2-201ENSMUST00000117548 Pde4dQ01063 747 aa9□□□□□ -0.97
Hmgb1-ps2-201ENSMUST00000117548 Sra1Q80VJ2 232 aa9□□□□□ -0.97
Hmgb1-ps2-201ENSMUST00000117548 Slc4a5E9Q3M5 1116 aa8.99□□□□□ -0.97
Hmgb1-ps2-201ENSMUST00000117548 UncxO08934 530 aa8.99□□□□□ -0.97
Hmgb1-ps2-201ENSMUST00000117548 Zbtb38Q3LR78 1197 aa8.94□□□□□ -0.98
Hmgb1-ps2-201ENSMUST00000117548 Map4k4P97820 1233 aaKnown RBP8.93□□□□□ -0.98
Hmgb1-ps2-201ENSMUST00000117548 Hnrnpul2Q00PI9 745 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 96.5 ms