RNA–Protein interactions for RNA: ENSMUST00000115318.3

Synpo-202, Transcript of Synaptopodin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Synpo, Length 4,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo-202ENSMUST00000115318 Rhox8Q6VSS7 320 aa20.74■□□□□ 0.91
Synpo-202ENSMUST00000115318 Rpgrip1Q9EPQ2 1331 aa19.02■□□□□ 0.64
Synpo-202ENSMUST00000115318 NischQ80TM9 1593 aa18.56■□□□□ 0.56
Synpo-202ENSMUST00000115318 Ccdc136Q3TVA9 1136 aa18.4■□□□□ 0.54
Synpo-202ENSMUST00000115318 Trim41Q5NCC3 630 aa18.31■□□□□ 0.52
Synpo-202ENSMUST00000115318 Esf1Q3V1V3 845 aaKnown RBP18.31■□□□□ 0.52
Synpo-202ENSMUST00000115318 Cngb1E1AZ71 1325 aa18.2■□□□□ 0.5
Synpo-202ENSMUST00000115318 Ehmt2Q9Z148 1263 aaKnown RBP18.19■□□□□ 0.5
Synpo-202ENSMUST00000115318 Las1lA2BE28 776 aaKnown RBP18.03■□□□□ 0.48
Synpo-202ENSMUST00000115318 Gab3Q8BSM5 595 aa17.91■□□□□ 0.46
Synpo-202ENSMUST00000115318 Npm2Q80W85 207 aa17.86■□□□□ 0.45
Synpo-202ENSMUST00000115318 Zeb1Q64318 1117 aa17.85■□□□□ 0.45
Synpo-202ENSMUST00000115318 Wdr66E9Q743 1299 aa17.83■□□□□ 0.44
Synpo-202ENSMUST00000115318 Ube2uB1AUC4 352 aa17.74■□□□□ 0.43
Synpo-202ENSMUST00000115318 Myt1lP97500 1187 aa17.64■□□□□ 0.41
Synpo-202ENSMUST00000115318 HrcG5E8J6 738 aa17.62■□□□□ 0.41
Synpo-202ENSMUST00000115318 Ccdc180J3QNE4 1664 aa17.56■□□□□ 0.4
Synpo-202ENSMUST00000115318 NefmP08553 848 aa17.56■□□□□ 0.4
Synpo-202ENSMUST00000115318 Acin1Q9JIX8 1338 aaKnown RBP17.55■□□□□ 0.4
Synpo-202ENSMUST00000115318 Pelp1Q9DBD5 1123 aaKnown RBP17.55■□□□□ 0.4
Synpo-202ENSMUST00000115318 Rtl1Q7M732 1744 aa17.42■□□□□ 0.38
Synpo-202ENSMUST00000115318 Abcc9P70170 1546 aa17.36■□□□□ 0.37
Synpo-202ENSMUST00000115318 UbtfP25976 765 aaKnown RBP17.29■□□□□ 0.36
Synpo-202ENSMUST00000115318 Stra8P70278 393 aa17.25■□□□□ 0.35
Synpo-202ENSMUST00000115318 Zcchc6Q5BLK4 1491 aaKnown RBP17.19■□□□□ 0.34
Synpo-202ENSMUST00000115318 Il27Q8K3I6 234 aa17.1■□□□□ 0.33
Synpo-202ENSMUST00000115318 CenpbP27790 599 aa17.08■□□□□ 0.32
Synpo-202ENSMUST00000115318 Abcc8B2RUS7 1588 aa16.97■□□□□ 0.31
Synpo-202ENSMUST00000115318 Cdk11bP24788 784 aaKnown RBP16.87■□□□□ 0.29
Synpo-202ENSMUST00000115318 Anp32bQ9EST5 272 aaKnown RBP16.81■□□□□ 0.28
Synpo-202ENSMUST00000115318 Fam50aQ9WV03 339 aaKnown RBP16.8■□□□□ 0.28
Synpo-202ENSMUST00000115318 Gm35339A0A140LHH9 1649 aa16.79■□□□□ 0.28
Synpo-202ENSMUST00000115318 Pcgf6Q99NA9 353 aa16.77■□□□□ 0.28
Synpo-202ENSMUST00000115318 Slc24a1Q91WD8 1130 aa16.75■□□□□ 0.27
Synpo-202ENSMUST00000115318 Tnnt3Q9QZ47 272 aa16.75■□□□□ 0.27
Synpo-202ENSMUST00000115318 NclP09405 707 aaKnown RBP16.72■□□□□ 0.27
Synpo-202ENSMUST00000115318 NrdcQ8BHG1 1161 aa16.71■□□□□ 0.27
Synpo-202ENSMUST00000115318 Ap3b1Q9Z1T1 1105 aa16.71■□□□□ 0.27
Synpo-202ENSMUST00000115318 Nop58Q6DFW4 536 aaKnown RBP16.68■□□□□ 0.26
Synpo-202ENSMUST00000115318 TonslQ6NZL6 1363 aa16.65■□□□□ 0.26
Synpo-202ENSMUST00000115318 Npm1Q61937 292 aaKnown RBP16.64■□□□□ 0.25
Synpo-202ENSMUST00000115318 Brd4Q9ESU6 1400 aaKnown RBP16.58■□□□□ 0.24
Synpo-202ENSMUST00000115318 Neurod1Q60867 357 aa16.55■□□□□ 0.24
Synpo-202ENSMUST00000115318 Mier1Q5UAK0 511 aa16.55■□□□□ 0.24
Synpo-202ENSMUST00000115318 Myt1Q8CFC2 1127 aa16.52■□□□□ 0.24
Synpo-202ENSMUST00000115318 NeflP08551 543 aa16.49■□□□□ 0.23
Synpo-202ENSMUST00000115318 Os9Q8K2C7 672 aa16.47■□□□□ 0.23
Synpo-202ENSMUST00000115318 Supt5hO55201 1082 aaKnown RBP16.44■□□□□ 0.22
Synpo-202ENSMUST00000115318 Amer1Q7TS75 1132 aa16.42■□□□□ 0.22
Synpo-202ENSMUST00000115318 Cep164Q5DU05 1446 aa16.41■□□□□ 0.22
Synpo-202ENSMUST00000115318 Plekhg3Q4VAC9 1341 aa16.36■□□□□ 0.21
Synpo-202ENSMUST00000115318 Lmod2Q3UHZ5 550 aa16.35■□□□□ 0.21
Synpo-202ENSMUST00000115318 ClspnQ80YR7 1315 aa16.35■□□□□ 0.21
Synpo-202ENSMUST00000115318 Dcaf1Q80TR8 1506 aa16.32■□□□□ 0.2
Synpo-202ENSMUST00000115318 Rb1cc1Q9ESK9 1588 aa16.3■□□□□ 0.2
Synpo-202ENSMUST00000115318 Eif5bQ05D44 1216 aaKnown RBP16.29■□□□□ 0.2
Synpo-202ENSMUST00000115318 Ccer2J3QPU5 274 aa16.29■□□□□ 0.2
Synpo-202ENSMUST00000115318 Clip1Q922J3 1391 aa16.27■□□□□ 0.2
Synpo-202ENSMUST00000115318 Hdac5Q9Z2V6 1113 aa16.27■□□□□ 0.2
Synpo-202ENSMUST00000115318 Ppargc1bQ8VHJ7 1014 aa16.27■□□□□ 0.19
Synpo-202ENSMUST00000115318 Rtl5Q5DTT4 599 aa16.24■□□□□ 0.19
Synpo-202ENSMUST00000115318 Chic1Q8CBW7 227 aa16.2■□□□□ 0.18
Synpo-202ENSMUST00000115318 NacadQ5SWP3 1504 aa16.16■□□□□ 0.18
Synpo-202ENSMUST00000115318 Hnrnpul2Q00PI9 745 aaKnown RBP16.15■□□□□ 0.18
Synpo-202ENSMUST00000115318 4933416C03RikQ3V063 378 aa16.14■□□□□ 0.17
Synpo-202ENSMUST00000115318 Ubl4bQ9CQ84 188 aa16.08■□□□□ 0.16
Synpo-202ENSMUST00000115318 Zbtb7cQ8VCZ7 619 aa16.08■□□□□ 0.16
Synpo-202ENSMUST00000115318 Eid3Q3V124 375 aa16.02■□□□□ 0.15
Synpo-202ENSMUST00000115318 Baz1aO88379 1555 aa16.01■□□□□ 0.15
Synpo-202ENSMUST00000115318 Anp32aO35381 247 aa16■□□□□ 0.15
Synpo-202ENSMUST00000115318 4930567H17RikQ3V0K5 233 aa16■□□□□ 0.15
Synpo-202ENSMUST00000115318 Gm13697A2AK42 830 aa16■□□□□ 0.15
Synpo-202ENSMUST00000115318 Ttbk1Q6PCN3 1308 aa15.98■□□□□ 0.15
Synpo-202ENSMUST00000115318 Golga3P55937 1487 aa15.94■□□□□ 0.14
Synpo-202ENSMUST00000115318 Sall2Q9QX96 1004 aa15.94■□□□□ 0.14
Synpo-202ENSMUST00000115318 Clstn2Q9ER65 966 aa15.93■□□□□ 0.14
Synpo-202ENSMUST00000115318 Erich6D3Z6S9 713 aa15.92■□□□□ 0.14
Synpo-202ENSMUST00000115318 Nlrp6Q91WS2 869 aa15.92■□□□□ 0.14
Synpo-202ENSMUST00000115318 BlmO88700 1416 aa15.91■□□□□ 0.14
Synpo-202ENSMUST00000115318 Anks4bQ8K3X6 423 aa15.9■□□□□ 0.14
Synpo-202ENSMUST00000115318 Ifnlr1Q8CGK5 535 aa15.9■□□□□ 0.14
Synpo-202ENSMUST00000115318 Fkbp15Q6P9Q6 1216 aaKnown RBP15.88■□□□□ 0.13
Synpo-202ENSMUST00000115318 Setd5Q5XJV7 1441 aa15.88■□□□□ 0.13
Synpo-202ENSMUST00000115318 Rsf1E9PWW9 1441 aaKnown RBP15.87■□□□□ 0.13
Synpo-202ENSMUST00000115318 Upf2A2AT37 1269 aaKnown RBP15.85■□□□□ 0.13
Synpo-202ENSMUST00000115318 Atp1b4Q99ME6 356 aa15.84■□□□□ 0.13
Synpo-202ENSMUST00000115318 Zbtb4Q5F293 982 aa15.81■□□□□ 0.12
Synpo-202ENSMUST00000115318 Kif15Q6P9L6 1387 aa15.78■□□□□ 0.12
Synpo-202ENSMUST00000115318 Mapk8ip2Q9ERE9 830 aa15.77■□□□□ 0.12
Synpo-202ENSMUST00000115318 Chic2Q9D9G3 165 aa15.76■□□□□ 0.11
Synpo-202ENSMUST00000115318 Gm13695A2AK44 830 aa15.75■□□□□ 0.11
Synpo-202ENSMUST00000115318 Eea1Q8BL66 1411 aa15.74■□□□□ 0.11
Synpo-202ENSMUST00000115318 Ccdc18Q640L5 1455 aa15.73■□□□□ 0.11
Synpo-202ENSMUST00000115318 Aplp2Q06335 707 aa15.73■□□□□ 0.11
Synpo-202ENSMUST00000115318 Ercc6F8VPZ5 1481 aa15.7■□□□□ 0.1
Synpo-202ENSMUST00000115318 Mrs2Q5NCE8 434 aa15.68■□□□□ 0.1
Synpo-202ENSMUST00000115318 Calr4Q3TQS0 420 aa15.67■□□□□ 0.1
Synpo-202ENSMUST00000115318 Kdm5dQ62240 1548 aa15.66■□□□□ 0.1
Synpo-202ENSMUST00000115318 Polr3glQ8R0C0 218 aa15.65■□□□□ 0.1
Synpo-202ENSMUST00000115318 DaxxO35613 739 aa15.65■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 179.6 ms