RNA–Protein interactions for RNA: ENSMUST00000112354.2

Scn9a-203, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 6,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-203ENSMUST00000112354 Rhox8Q6VSS7 320 aa11.87□□□□□ -0.51
Scn9a-203ENSMUST00000112354 Rpgrip1Q9EPQ2 1331 aa10.75□□□□□ -0.69
Scn9a-203ENSMUST00000112354 NischQ80TM9 1593 aa10.73□□□□□ -0.69
Scn9a-203ENSMUST00000112354 Esf1Q3V1V3 845 aaKnown RBP10.58□□□□□ -0.72
Scn9a-203ENSMUST00000112354 Trim41Q5NCC3 630 aa10.57□□□□□ -0.72
Scn9a-203ENSMUST00000112354 Ccdc136Q3TVA9 1136 aa10.48□□□□□ -0.73
Scn9a-203ENSMUST00000112354 Cngb1E1AZ71 1325 aa10.46□□□□□ -0.74
Scn9a-203ENSMUST00000112354 Gm35339A0A140LHH9 1649 aa10.38□□□□□ -0.75
Scn9a-203ENSMUST00000112354 Las1lA2BE28 776 aaKnown RBP10.34□□□□□ -0.75
Scn9a-203ENSMUST00000112354 Zeb1Q64318 1117 aa10.33□□□□□ -0.76
Scn9a-203ENSMUST00000112354 Npm2Q80W85 207 aa10.3□□□□□ -0.76
Scn9a-203ENSMUST00000112354 Abcc9P70170 1546 aa10.24□□□□□ -0.77
Scn9a-203ENSMUST00000112354 Ube2uB1AUC4 352 aa10.2□□□□□ -0.78
Scn9a-203ENSMUST00000112354 Gab3Q8BSM5 595 aa10.18□□□□□ -0.78
Scn9a-203ENSMUST00000112354 Ehmt2Q9Z148 1263 aaKnown RBP10.13□□□□□ -0.79
Scn9a-203ENSMUST00000112354 Myt1lP97500 1187 aa10.09□□□□□ -0.79
Scn9a-203ENSMUST00000112354 Wdr66E9Q743 1299 aa10.07□□□□□ -0.8
Scn9a-203ENSMUST00000112354 Pelp1Q9DBD5 1123 aaKnown RBP10.06□□□□□ -0.8
Scn9a-203ENSMUST00000112354 Ccdc180J3QNE4 1664 aa10.05□□□□□ -0.8
Scn9a-203ENSMUST00000112354 HrcG5E8J6 738 aa10.05□□□□□ -0.8
Scn9a-203ENSMUST00000112354 Rtl1Q7M732 1744 aa10.03□□□□□ -0.8
Scn9a-203ENSMUST00000112354 Abcc8B2RUS7 1588 aa10.03□□□□□ -0.8
Scn9a-203ENSMUST00000112354 NefmP08553 848 aa9.99□□□□□ -0.81
Scn9a-203ENSMUST00000112354 Myt1Q8CFC2 1127 aa9.94□□□□□ -0.82
Scn9a-203ENSMUST00000112354 Zcchc6Q5BLK4 1491 aaKnown RBP9.93□□□□□ -0.82
Scn9a-203ENSMUST00000112354 Stra8P70278 393 aa9.88□□□□□ -0.83
Scn9a-203ENSMUST00000112354 Il27Q8K3I6 234 aa9.85□□□□□ -0.83
Scn9a-203ENSMUST00000112354 Amer1Q7TS75 1132 aa9.84□□□□□ -0.83
Scn9a-203ENSMUST00000112354 Acin1Q9JIX8 1338 aaKnown RBP9.83□□□□□ -0.84
Scn9a-203ENSMUST00000112354 UbtfP25976 765 aaKnown RBP9.8□□□□□ -0.84
Scn9a-203ENSMUST00000112354 CenpbP27790 599 aa9.74□□□□□ -0.85
Scn9a-203ENSMUST00000112354 Anp32bQ9EST5 272 aaKnown RBP9.7□□□□□ -0.86
Scn9a-203ENSMUST00000112354 Npm1Q61937 292 aaKnown RBP9.69□□□□□ -0.86
Scn9a-203ENSMUST00000112354 Brd4Q9ESU6 1400 aaKnown RBP9.62□□□□□ -0.87
Scn9a-203ENSMUST00000112354 NclP09405 707 aaKnown RBP9.6□□□□□ -0.87
Scn9a-203ENSMUST00000112354 4930567H17RikQ3V0K5 233 aa9.6□□□□□ -0.87
Scn9a-203ENSMUST00000112354 Fam50aQ9WV03 339 aaKnown RBP9.6□□□□□ -0.87
Scn9a-203ENSMUST00000112354 NrdcQ8BHG1 1161 aa9.54□□□□□ -0.88
Scn9a-203ENSMUST00000112354 Ap3b1Q9Z1T1 1105 aa9.53□□□□□ -0.88
Scn9a-203ENSMUST00000112354 Hdac5Q9Z2V6 1113 aa9.53□□□□□ -0.88
Scn9a-203ENSMUST00000112354 Dcaf1Q80TR8 1506 aa9.52□□□□□ -0.88
Scn9a-203ENSMUST00000112354 Os9Q8K2C7 672 aa9.51□□□□□ -0.89
Scn9a-203ENSMUST00000112354 Tnnt3Q9QZ47 272 aa9.5□□□□□ -0.89
Scn9a-203ENSMUST00000112354 Cdk11bP24788 784 aaKnown RBP9.48□□□□□ -0.89
Scn9a-203ENSMUST00000112354 TonslQ6NZL6 1363 aa9.45□□□□□ -0.9
Scn9a-203ENSMUST00000112354 Slc24a1Q91WD8 1130 aa9.45□□□□□ -0.9
Scn9a-203ENSMUST00000112354 NacadQ5SWP3 1504 aa9.45□□□□□ -0.9
Scn9a-203ENSMUST00000112354 Rb1cc1Q9ESK9 1588 aa9.43□□□□□ -0.9
Scn9a-203ENSMUST00000112354 NeflP08551 543 aa9.43□□□□□ -0.9
Scn9a-203ENSMUST00000112354 Neurod1Q60867 357 aa9.41□□□□□ -0.9
Scn9a-203ENSMUST00000112354 Ccer2J3QPU5 274 aa9.39□□□□□ -0.91
Scn9a-203ENSMUST00000112354 Cep164Q5DU05 1446 aa9.38□□□□□ -0.91
Scn9a-203ENSMUST00000112354 Ubl4bQ9CQ84 188 aa9.37□□□□□ -0.91
Scn9a-203ENSMUST00000112354 DiexfQ8BTT6 772 aaKnown RBP9.36□□□□□ -0.91
Scn9a-203ENSMUST00000112354 Nop58Q6DFW4 536 aaKnown RBP9.36□□□□□ -0.91
Scn9a-203ENSMUST00000112354 Ttbk1Q6PCN3 1308 aa9.34□□□□□ -0.91
Scn9a-203ENSMUST00000112354 Lmod2Q3UHZ5 550 aa9.33□□□□□ -0.92
Scn9a-203ENSMUST00000112354 Gm13697A2AK42 830 aa9.33□□□□□ -0.92
Scn9a-203ENSMUST00000112354 Clip1Q922J3 1391 aa9.31□□□□□ -0.92
Scn9a-203ENSMUST00000112354 Mier1Q5UAK0 511 aa9.31□□□□□ -0.92
Scn9a-203ENSMUST00000112354 Rtl5Q5DTT4 599 aa9.3□□□□□ -0.92
Scn9a-203ENSMUST00000112354 Hnrnpul2Q00PI9 745 aaKnown RBP9.3□□□□□ -0.92
Scn9a-203ENSMUST00000112354 Pcgf6Q99NA9 353 aa9.3□□□□□ -0.92
Scn9a-203ENSMUST00000112354 Plekhg3Q4VAC9 1341 aa9.28□□□□□ -0.92
Scn9a-203ENSMUST00000112354 4933416C03RikQ3V063 378 aa9.28□□□□□ -0.92
Scn9a-203ENSMUST00000112354 Baz1aO88379 1555 aa9.27□□□□□ -0.92
Scn9a-203ENSMUST00000112354 Clstn2Q9ER65 966 aa9.26□□□□□ -0.93
Scn9a-203ENSMUST00000112354 ScribQ80U72 1612 aa9.26□□□□□ -0.93
Scn9a-203ENSMUST00000112354 Rsf1E9PWW9 1441 aaKnown RBP9.25□□□□□ -0.93
Scn9a-203ENSMUST00000112354 Ercc6F8VPZ5 1481 aa9.25□□□□□ -0.93
Scn9a-203ENSMUST00000112354 ClspnQ80YR7 1315 aa9.23□□□□□ -0.93
Scn9a-203ENSMUST00000112354 Zbtb7cQ8VCZ7 619 aa9.19□□□□□ -0.94
Scn9a-203ENSMUST00000112354 Ifnlr1Q8CGK5 535 aa9.19□□□□□ -0.94
Scn9a-203ENSMUST00000112354 Golga3P55937 1487 aa9.18□□□□□ -0.94
Scn9a-203ENSMUST00000112354 Eif5bQ05D44 1216 aaKnown RBP9.18□□□□□ -0.94
Scn9a-203ENSMUST00000112354 Ccdc18Q640L5 1455 aa9.18□□□□□ -0.94
Scn9a-203ENSMUST00000112354 Chic1Q8CBW7 227 aa9.17□□□□□ -0.94
Scn9a-203ENSMUST00000112354 Erich6D3Z6S9 713 aa9.17□□□□□ -0.94
Scn9a-203ENSMUST00000112354 Gm13695A2AK44 830 aa9.17□□□□□ -0.94
Scn9a-203ENSMUST00000112354 Atp1b4Q99ME6 356 aa9.16□□□□□ -0.94
Scn9a-203ENSMUST00000112354 Kif15Q6P9L6 1387 aa9.16□□□□□ -0.94
Scn9a-203ENSMUST00000112354 Nlrp6Q91WS2 869 aa9.15□□□□□ -0.94
Scn9a-203ENSMUST00000112354 Kdm5dQ62240 1548 aa9.15□□□□□ -0.94
Scn9a-203ENSMUST00000112354 Fkbp15Q6P9Q6 1216 aaKnown RBP9.15□□□□□ -0.95
Scn9a-203ENSMUST00000112354 Crybg2B7ZCC2 1516 aa9.14□□□□□ -0.95
Scn9a-203ENSMUST00000112354 Pds5bQ4VA53 1446 aaKnown RBP9.12□□□□□ -0.95
Scn9a-203ENSMUST00000112354 BlmO88700 1416 aa9.11□□□□□ -0.95
Scn9a-203ENSMUST00000112354 Setd5Q5XJV7 1441 aa9.11□□□□□ -0.95
Scn9a-203ENSMUST00000112354 Supt5hO55201 1082 aaKnown RBP9.09□□□□□ -0.95
Scn9a-203ENSMUST00000112354 Upf2A2AT37 1269 aaKnown RBP9.08□□□□□ -0.96
Scn9a-203ENSMUST00000112354 Eea1Q8BL66 1411 aa9.05□□□□□ -0.96
Scn9a-203ENSMUST00000112354 Safb2Q80YR5 991 aaKnown RBP9.02□□□□□ -0.96
Scn9a-203ENSMUST00000112354 Ppargc1bQ8VHJ7 1014 aa9.01□□□□□ -0.97
Scn9a-203ENSMUST00000112354 Eid3Q3V124 375 aa9□□□□□ -0.97
Scn9a-203ENSMUST00000112354 Anp32aO35381 247 aa9□□□□□ -0.97
Scn9a-203ENSMUST00000112354 Chic2Q9D9G3 165 aa8.98□□□□□ -0.97
Scn9a-203ENSMUST00000112354 Sycp2Q9CUU3 1500 aa8.98□□□□□ -0.97
Scn9a-203ENSMUST00000112354 Zbtb4Q5F293 982 aa8.96□□□□□ -0.97
Scn9a-203ENSMUST00000112354 Zfp777B9EKF4 885 aa8.96□□□□□ -0.98
Scn9a-203ENSMUST00000112354 Aplp2Q06335 707 aa8.95□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms