RNA–Protein interactions for RNA: ENSMUST00000111088.8

Pax6-208, Transcript of Paired box protein Pax-6, mousemouse

TSL 1 (best) BASIC

Gene Pax6, Length 4,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pax6-208ENSMUST00000111088 NischQ80TM9 1593 aa14.15□□□□□ -0.14
Pax6-208ENSMUST00000111088 Ube2uB1AUC4 352 aa13.99□□□□□ -0.17
Pax6-208ENSMUST00000111088 Rpgrip1Q9EPQ2 1331 aa13.97□□□□□ -0.17
Pax6-208ENSMUST00000111088 Gm35339A0A140LHH9 1649 aa13.85□□□□□ -0.19
Pax6-208ENSMUST00000111088 Chic1Q8CBW7 227 aa13.77□□□□□ -0.21
Pax6-208ENSMUST00000111088 Rhox8Q6VSS7 320 aa13.7□□□□□ -0.22
Pax6-208ENSMUST00000111088 Ehmt2Q9Z148 1263 aaKnown RBP13.68□□□□□ -0.22
Pax6-208ENSMUST00000111088 Abcc9P70170 1546 aa13.58□□□□□ -0.24
Pax6-208ENSMUST00000111088 Plppr3Q7TPB0 716 aa13.56□□□□□ -0.24
Pax6-208ENSMUST00000111088 Abcc8B2RUS7 1588 aa13.47□□□□□ -0.25
Pax6-208ENSMUST00000111088 Ppargc1bQ8VHJ7 1014 aa13.25□□□□□ -0.29
Pax6-208ENSMUST00000111088 Kcna4Q61423 654 aa13.23□□□□□ -0.29
Pax6-208ENSMUST00000111088 Las1lA2BE28 776 aaKnown RBP13.1□□□□□ -0.31
Pax6-208ENSMUST00000111088 Acin1Q9JIX8 1338 aaKnown RBP13.04□□□□□ -0.32
Pax6-208ENSMUST00000111088 Pcgf6Q99NA9 353 aa12.87□□□□□ -0.35
Pax6-208ENSMUST00000111088 Myt1Q8CFC2 1127 aa12.87□□□□□ -0.35
Pax6-208ENSMUST00000111088 Gab3Q8BSM5 595 aa12.79□□□□□ -0.36
Pax6-208ENSMUST00000111088 Rtl1Q7M732 1744 aa12.74□□□□□ -0.37
Pax6-208ENSMUST00000111088 Ccdc180J3QNE4 1664 aa12.72□□□□□ -0.37
Pax6-208ENSMUST00000111088 NacadQ5SWP3 1504 aa12.68□□□□□ -0.38
Pax6-208ENSMUST00000111088 CenpbP27790 599 aa12.65□□□□□ -0.38
Pax6-208ENSMUST00000111088 ScribQ80U72 1612 aa12.65□□□□□ -0.38
Pax6-208ENSMUST00000111088 Cngb1E1AZ71 1325 aa12.56□□□□□ -0.4
Pax6-208ENSMUST00000111088 Ttbk1Q6PCN3 1308 aa12.56□□□□□ -0.4
Pax6-208ENSMUST00000111088 Mapk8ip2Q9ERE9 830 aa12.55□□□□□ -0.4
Pax6-208ENSMUST00000111088 Kdm5dQ62240 1548 aa12.52□□□□□ -0.4
Pax6-208ENSMUST00000111088 Dcaf1Q80TR8 1506 aa12.5□□□□□ -0.41
Pax6-208ENSMUST00000111088 Phf23Q8BSN5 401 aa12.47□□□□□ -0.41
Pax6-208ENSMUST00000111088 DiexfQ8BTT6 772 aaKnown RBP12.45□□□□□ -0.42
Pax6-208ENSMUST00000111088 Rb1cc1Q9ESK9 1588 aa12.37□□□□□ -0.43
Pax6-208ENSMUST00000111088 Supt5hO55201 1082 aaKnown RBP12.37□□□□□ -0.43
Pax6-208ENSMUST00000111088 Neurod1Q60867 357 aa12.36□□□□□ -0.43
Pax6-208ENSMUST00000111088 Sycp2Q9CUU3 1500 aa12.31□□□□□ -0.44
Pax6-208ENSMUST00000111088 Zcchc6Q5BLK4 1491 aaKnown RBP12.28□□□□□ -0.44
Pax6-208ENSMUST00000111088 Slc4a1apE9PX68 744 aa12.21□□□□□ -0.46
Pax6-208ENSMUST00000111088 Zeb1Q64318 1117 aa12.21□□□□□ -0.46
Pax6-208ENSMUST00000111088 Baz1aO88379 1555 aa12.19□□□□□ -0.46
Pax6-208ENSMUST00000111088 HrcG5E8J6 738 aa12.19□□□□□ -0.46
Pax6-208ENSMUST00000111088 Esf1Q3V1V3 845 aaKnown RBP12.16□□□□□ -0.46
Pax6-208ENSMUST00000111088 Trim41Q5NCC3 630 aa12.16□□□□□ -0.46
Pax6-208ENSMUST00000111088 NefmP08553 848 aa12.15□□□□□ -0.46
Pax6-208ENSMUST00000111088 Anks4bQ8K3X6 423 aa12.15□□□□□ -0.46
Pax6-208ENSMUST00000111088 1700123L14RikQ3V2K7 440 aa12.13□□□□□ -0.47
Pax6-208ENSMUST00000111088 Amer1Q7TS75 1132 aa12.13□□□□□ -0.47
Pax6-208ENSMUST00000111088 Aplp2Q06335 707 aa12.12□□□□□ -0.47
Pax6-208ENSMUST00000111088 Arid3aQ62431 601 aa12.11□□□□□ -0.47
Pax6-208ENSMUST00000111088 Ccdc136Q3TVA9 1136 aa12.09□□□□□ -0.47
Pax6-208ENSMUST00000111088 Crybg2B7ZCC2 1516 aa12.06□□□□□ -0.48
Pax6-208ENSMUST00000111088 Pelp1Q9DBD5 1123 aaKnown RBP12.05□□□□□ -0.48
Pax6-208ENSMUST00000111088 Prdm10Q3UTQ7 1184 aa12.05□□□□□ -0.48
Pax6-208ENSMUST00000111088 Csrnp3P59055 597 aa12.03□□□□□ -0.48
Pax6-208ENSMUST00000111088 Cdk11bP24788 784 aaKnown RBP12.02□□□□□ -0.49
Pax6-208ENSMUST00000111088 Pds5bQ4VA53 1446 aaKnown RBP12□□□□□ -0.49
Pax6-208ENSMUST00000111088 Wdr66E9Q743 1299 aa11.99□□□□□ -0.49
Pax6-208ENSMUST00000111088 Bcl11aQ9QYE3 773 aa11.98□□□□□ -0.49
Pax6-208ENSMUST00000111088 Senp3Q9EP97 568 aaKnown RBP11.98□□□□□ -0.49
Pax6-208ENSMUST00000111088 Npm2Q80W85 207 aa11.9□□□□□ -0.5
Pax6-208ENSMUST00000111088 Nop58Q6DFW4 536 aaKnown RBP11.89□□□□□ -0.51
Pax6-208ENSMUST00000111088 BicraF8VPZ9 1578 aa11.88□□□□□ -0.51
Pax6-208ENSMUST00000111088 Ercc6F8VPZ5 1481 aa11.88□□□□□ -0.51
Pax6-208ENSMUST00000111088 Rtl5Q5DTT4 599 aa11.85□□□□□ -0.51
Pax6-208ENSMUST00000111088 Brd4Q9ESU6 1400 aaKnown RBP11.83□□□□□ -0.52
Pax6-208ENSMUST00000111088 Sall2Q9QX96 1004 aa11.82□□□□□ -0.52
Pax6-208ENSMUST00000111088 Atad2bE9Q166 1460 aaKnown RBP11.82□□□□□ -0.52
Pax6-208ENSMUST00000111088 Fam71e1A1L3C1 212 aa11.81□□□□□ -0.52
Pax6-208ENSMUST00000111088 Tnnt3Q9QZ47 272 aa11.8□□□□□ -0.52
Pax6-208ENSMUST00000111088 AcrbpQ3V140 540 aa11.8□□□□□ -0.52
Pax6-208ENSMUST00000111088 ArxO35085 564 aa11.73□□□□□ -0.53
Pax6-208ENSMUST00000111088 Smarca2Q6DIC0 1577 aa11.73□□□□□ -0.53
Pax6-208ENSMUST00000111088 Myt1lP97500 1187 aa11.73□□□□□ -0.53
Pax6-208ENSMUST00000111088 Smarca4Q3TKT4 1613 aaKnown RBP11.72□□□□□ -0.53
Pax6-208ENSMUST00000111088 Prm3Q62100 101 aa11.68□□□□□ -0.54
Pax6-208ENSMUST00000111088 ClspnQ80YR7 1315 aa11.67□□□□□ -0.54
Pax6-208ENSMUST00000111088 Ubl4bQ9CQ84 188 aa11.66□□□□□ -0.54
Pax6-208ENSMUST00000111088 Cecr2E9Q2Z1 1453 aa11.63□□□□□ -0.55
Pax6-208ENSMUST00000111088 Gm38655A0A286YDK6 273 aa11.62□□□□□ -0.55
Pax6-208ENSMUST00000111088 Mier1Q5UAK0 511 aa11.61□□□□□ -0.55
Pax6-208ENSMUST00000111088 Iqgap2Q3UQ44 1575 aa11.61□□□□□ -0.55
Pax6-208ENSMUST00000111088 Anp32aO35381 247 aa11.6□□□□□ -0.55
Pax6-208ENSMUST00000111088 Ecm2Q5FW85 670 aa11.59□□□□□ -0.55
Pax6-208ENSMUST00000111088 Stra8P70278 393 aa11.59□□□□□ -0.55
Pax6-208ENSMUST00000111088 Trap1aP19473 224 aa11.57□□□□□ -0.56
Pax6-208ENSMUST00000111088 Phldb1Q6PDH0 1371 aaKnown RBP11.57□□□□□ -0.56
Pax6-208ENSMUST00000111088 Npm1Q61937 292 aaKnown RBP11.53□□□□□ -0.56
Pax6-208ENSMUST00000111088 CftrP26361 1476 aa11.52□□□□□ -0.56
Pax6-208ENSMUST00000111088 Il27Q8K3I6 234 aa11.5□□□□□ -0.57
Pax6-208ENSMUST00000111088 Taok2Q6ZQ29 1240 aa11.5□□□□□ -0.57
Pax6-208ENSMUST00000111088 Dmrt2Q8BG36 561 aa11.5□□□□□ -0.57
Pax6-208ENSMUST00000111088 Rsf1E9PWW9 1441 aaKnown RBP11.5□□□□□ -0.57
Pax6-208ENSMUST00000111088 PrkcshO08795 521 aa11.49□□□□□ -0.57
Pax6-208ENSMUST00000111088 Cttnbp2B9EJA2 1648 aa11.49□□□□□ -0.57
Pax6-208ENSMUST00000111088 Cep164Q5DU05 1446 aa11.46□□□□□ -0.58
Pax6-208ENSMUST00000111088 Synj1Q8CHC4 1574 aa11.45□□□□□ -0.58
Pax6-208ENSMUST00000111088 Kif15Q6P9L6 1387 aa11.43□□□□□ -0.58
Pax6-208ENSMUST00000111088 Ccdc9Q8VC31 543 aaKnown RBP11.42□□□□□ -0.58
Pax6-208ENSMUST00000111088 Dnajc5bQ9CQ94 199 aa11.41□□□□□ -0.58
Pax6-208ENSMUST00000111088 Frmpd1A2AKB4 1549 aa11.41□□□□□ -0.58
Pax6-208ENSMUST00000111088 Wdr62Q3U3T8 1523 aa11.41□□□□□ -0.58
Pax6-208ENSMUST00000111088 Thoc2B1AZI6 1594 aaKnown RBP11.41□□□□□ -0.58
Pax6-208ENSMUST00000111088 Cc2d2aQ8CFW7 1633 aa11.41□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms