RNA–Protein interactions for RNA: ENSMUST00000110819.3

Hdac9-201, Transcript of Histone deacetylase 9, mousemouse

TSL 1 (best) BASIC

Gene Hdac9, Length 4,413 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9-201ENSMUST00000110819 Rhox8Q6VSS7 320 aa11.69□□□□□ -0.54
Hdac9-201ENSMUST00000110819 Gm35339A0A140LHH9 1649 aa11.41□□□□□ -0.58
Hdac9-201ENSMUST00000110819 NischQ80TM9 1593 aa11.03□□□□□ -0.64
Hdac9-201ENSMUST00000110819 Abcc9P70170 1546 aa10.65□□□□□ -0.7
Hdac9-201ENSMUST00000110819 Esf1Q3V1V3 845 aaKnown RBP10.6□□□□□ -0.71
Hdac9-201ENSMUST00000110819 Ccdc136Q3TVA9 1136 aa10.47□□□□□ -0.73
Hdac9-201ENSMUST00000110819 Abcc8B2RUS7 1588 aa10.42□□□□□ -0.74
Hdac9-201ENSMUST00000110819 Trim41Q5NCC3 630 aa10.37□□□□□ -0.75
Hdac9-201ENSMUST00000110819 Cngb1E1AZ71 1325 aa10.36□□□□□ -0.75
Hdac9-201ENSMUST00000110819 Zeb1Q64318 1117 aa10.27□□□□□ -0.77
Hdac9-201ENSMUST00000110819 ScribQ80U72 1612 aa10.27□□□□□ -0.77
Hdac9-201ENSMUST00000110819 Npm2Q80W85 207 aa10.14□□□□□ -0.79
Hdac9-201ENSMUST00000110819 Zcchc6Q5BLK4 1491 aaKnown RBP10.13□□□□□ -0.79
Hdac9-201ENSMUST00000110819 Il27Q8K3I6 234 aa10.05□□□□□ -0.8
Hdac9-201ENSMUST00000110819 Gab3Q8BSM5 595 aa9.98□□□□□ -0.81
Hdac9-201ENSMUST00000110819 Myt1lP97500 1187 aa9.93□□□□□ -0.82
Hdac9-201ENSMUST00000110819 Npm1Q61937 292 aaKnown RBP9.9□□□□□ -0.83
Hdac9-201ENSMUST00000110819 NacadQ5SWP3 1504 aa9.86□□□□□ -0.83
Hdac9-201ENSMUST00000110819 Ube2uB1AUC4 352 aa9.85□□□□□ -0.83
Hdac9-201ENSMUST00000110819 Ubl4bQ9CQ84 188 aa9.79□□□□□ -0.84
Hdac9-201ENSMUST00000110819 Dcaf1Q80TR8 1506 aa9.79□□□□□ -0.84
Hdac9-201ENSMUST00000110819 Kdm5dQ62240 1548 aa9.68□□□□□ -0.86
Hdac9-201ENSMUST00000110819 Rb1cc1Q9ESK9 1588 aa9.66□□□□□ -0.86
Hdac9-201ENSMUST00000110819 Brd4Q9ESU6 1400 aaKnown RBP9.65□□□□□ -0.87
Hdac9-201ENSMUST00000110819 Ercc6F8VPZ5 1481 aa9.63□□□□□ -0.87
Hdac9-201ENSMUST00000110819 Ccdc180J3QNE4 1664 aa9.63□□□□□ -0.87
Hdac9-201ENSMUST00000110819 Amer1Q7TS75 1132 aa9.61□□□□□ -0.87
Hdac9-201ENSMUST00000110819 Pelp1Q9DBD5 1123 aaKnown RBP9.6□□□□□ -0.87
Hdac9-201ENSMUST00000110819 DiexfQ8BTT6 772 aaKnown RBP9.59□□□□□ -0.87
Hdac9-201ENSMUST00000110819 Ttbk1Q6PCN3 1308 aa9.59□□□□□ -0.87
Hdac9-201ENSMUST00000110819 BicraF8VPZ9 1578 aa9.57□□□□□ -0.88
Hdac9-201ENSMUST00000110819 Pds5bQ4VA53 1446 aaKnown RBP9.56□□□□□ -0.88
Hdac9-201ENSMUST00000110819 Ehmt2Q9Z148 1263 aaKnown RBP9.56□□□□□ -0.88
Hdac9-201ENSMUST00000110819 Sycp2Q9CUU3 1500 aa9.55□□□□□ -0.88
Hdac9-201ENSMUST00000110819 Ifnlr1Q8CGK5 535 aa9.52□□□□□ -0.88
Hdac9-201ENSMUST00000110819 HrcG5E8J6 738 aa9.51□□□□□ -0.89
Hdac9-201ENSMUST00000110819 Ap3b1Q9Z1T1 1105 aa9.47□□□□□ -0.89
Hdac9-201ENSMUST00000110819 Baz1aO88379 1555 aa9.46□□□□□ -0.89
Hdac9-201ENSMUST00000110819 Rsf1E9PWW9 1441 aaKnown RBP9.45□□□□□ -0.9
Hdac9-201ENSMUST00000110819 Rtl1Q7M732 1744 aa9.43□□□□□ -0.9
Hdac9-201ENSMUST00000110819 Kif15Q6P9L6 1387 aa9.43□□□□□ -0.9
Hdac9-201ENSMUST00000110819 UbtfP25976 765 aaKnown RBP9.41□□□□□ -0.9
Hdac9-201ENSMUST00000110819 Fkbp15Q6P9Q6 1216 aaKnown RBP9.4□□□□□ -0.9
Hdac9-201ENSMUST00000110819 Las1lA2BE28 776 aaKnown RBP9.39□□□□□ -0.91
Hdac9-201ENSMUST00000110819 Gm13697A2AK42 830 aa9.38□□□□□ -0.91
Hdac9-201ENSMUST00000110819 Plppr3Q7TPB0 716 aa9.38□□□□□ -0.91
Hdac9-201ENSMUST00000110819 Cep164Q5DU05 1446 aa9.34□□□□□ -0.91
Hdac9-201ENSMUST00000110819 Fam50aQ9WV03 339 aaKnown RBP9.34□□□□□ -0.91
Hdac9-201ENSMUST00000110819 Thoc2B1AZI6 1594 aaKnown RBP9.33□□□□□ -0.92
Hdac9-201ENSMUST00000110819 Ccdc18Q640L5 1455 aa9.32□□□□□ -0.92
Hdac9-201ENSMUST00000110819 Crybg2B7ZCC2 1516 aa9.31□□□□□ -0.92
Hdac9-201ENSMUST00000110819 NclP09405 707 aaKnown RBP9.3□□□□□ -0.92
Hdac9-201ENSMUST00000110819 Lmod2Q3UHZ5 550 aa9.29□□□□□ -0.92
Hdac9-201ENSMUST00000110819 Phldb1Q6PDH0 1371 aaKnown RBP9.28□□□□□ -0.92
Hdac9-201ENSMUST00000110819 Atad2bE9Q166 1460 aaKnown RBP9.28□□□□□ -0.92
Hdac9-201ENSMUST00000110819 Os9Q8K2C7 672 aa9.27□□□□□ -0.93
Hdac9-201ENSMUST00000110819 Rpgrip1Q9EPQ2 1331 aa9.26□□□□□ -0.93
Hdac9-201ENSMUST00000110819 Hnrnpul2Q00PI9 745 aaKnown RBP9.25□□□□□ -0.93
Hdac9-201ENSMUST00000110819 Wdr66E9Q743 1299 aa9.24□□□□□ -0.93
Hdac9-201ENSMUST00000110819 Zbtb7cQ8VCZ7 619 aa9.23□□□□□ -0.93
Hdac9-201ENSMUST00000110819 Safb2Q80YR5 991 aaKnown RBP9.22□□□□□ -0.93
Hdac9-201ENSMUST00000110819 CenpbP27790 599 aa9.2□□□□□ -0.94
Hdac9-201ENSMUST00000110819 Gm13695A2AK44 830 aa9.17□□□□□ -0.94
Hdac9-201ENSMUST00000110819 Golga3P55937 1487 aa9.17□□□□□ -0.94
Hdac9-201ENSMUST00000110819 Chic1Q8CBW7 227 aa9.16□□□□□ -0.94
Hdac9-201ENSMUST00000110819 Arhgap27A2AB59 869 aa9.16□□□□□ -0.94
Hdac9-201ENSMUST00000110819 Cux2P70298 1426 aa9.15□□□□□ -0.95
Hdac9-201ENSMUST00000110819 Cdk11bP24788 784 aaKnown RBP9.15□□□□□ -0.95
Hdac9-201ENSMUST00000110819 Ppp1r18Q8BQ30 594 aa9.13□□□□□ -0.95
Hdac9-201ENSMUST00000110819 Hdac5Q9Z2V6 1113 aa9.12□□□□□ -0.95
Hdac9-201ENSMUST00000110819 Myt1Q8CFC2 1127 aa9.12□□□□□ -0.95
Hdac9-201ENSMUST00000110819 Plekhg3Q4VAC9 1341 aa9.11□□□□□ -0.95
Hdac9-201ENSMUST00000110819 Neurod1Q60867 357 aa9.11□□□□□ -0.95
Hdac9-201ENSMUST00000110819 Atp1b4Q99ME6 356 aa9.1□□□□□ -0.95
Hdac9-201ENSMUST00000110819 Erich6D3Z6S9 713 aa9.09□□□□□ -0.95
Hdac9-201ENSMUST00000110819 Clip1Q922J3 1391 aa9.09□□□□□ -0.95
Hdac9-201ENSMUST00000110819 NefmP08553 848 aa9.09□□□□□ -0.95
Hdac9-201ENSMUST00000110819 Pabpn1Q8CCS6 302 aaKnown RBP9.09□□□□□ -0.95
Hdac9-201ENSMUST00000110819 Smarca4Q3TKT4 1613 aaKnown RBP9.07□□□□□ -0.96
Hdac9-201ENSMUST00000110819 Slc24a1Q91WD8 1130 aa9.06□□□□□ -0.96
Hdac9-201ENSMUST00000110819 AknaQ80VW7 1404 aa9.06□□□□□ -0.96
Hdac9-201ENSMUST00000110819 Unc13aQ4KUS2 1712 aa9.04□□□□□ -0.96
Hdac9-201ENSMUST00000110819 CftrP26361 1476 aa9.04□□□□□ -0.96
Hdac9-201ENSMUST00000110819 Anp32bQ9EST5 272 aaKnown RBP9.02□□□□□ -0.96
Hdac9-201ENSMUST00000110819 Cecr2E9Q2Z1 1453 aa9.02□□□□□ -0.96
Hdac9-201ENSMUST00000110819 Fam135aQ6NS59 1506 aa9.02□□□□□ -0.97
Hdac9-201ENSMUST00000110819 Clstn2Q9ER65 966 aa9.02□□□□□ -0.97
Hdac9-201ENSMUST00000110819 Baz1bQ9Z277 1479 aa9.01□□□□□ -0.97
Hdac9-201ENSMUST00000110819 MyclP10166 368 aa9.01□□□□□ -0.97
Hdac9-201ENSMUST00000110819 Setd5Q5XJV7 1441 aa9.01□□□□□ -0.97
Hdac9-201ENSMUST00000110819 Pcgf6Q99NA9 353 aa9□□□□□ -0.97
Hdac9-201ENSMUST00000110819 Bcl11aQ9QYE3 773 aa9□□□□□ -0.97
Hdac9-201ENSMUST00000110819 Smarca2Q6DIC0 1577 aa8.99□□□□□ -0.97
Hdac9-201ENSMUST00000110819 Iqgap2Q3UQ44 1575 aa8.99□□□□□ -0.97
Hdac9-201ENSMUST00000110819 Arid3cA6PWV5 409 aa8.98□□□□□ -0.97
Hdac9-201ENSMUST00000110819 Fmn1Q05860 1466 aa8.97□□□□□ -0.97
Hdac9-201ENSMUST00000110819 LrpprcQ6PB66 1392 aaKnown RBP8.97□□□□□ -0.97
Hdac9-201ENSMUST00000110819 BlmO88700 1416 aa8.96□□□□□ -0.97
Hdac9-201ENSMUST00000110819 Dhx29Q6PGC1 1365 aaKnown RBP8.96□□□□□ -0.97
Hdac9-201ENSMUST00000110819 MlecQ6ZQI3 291 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms