RNA–Protein interactions for RNA: ENSMUST00000103633.1

Trav16n-201, Transcript of T cell receptor alpha variable 16n, mousemouse

APPRIS ALT2 BASIC

Gene Trav16n, Length 353 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16n-201ENSMUST00000103633 Chic1Q8CBW7 227 aa13.7□□□□□ -0.22
Trav16n-201ENSMUST00000103633 Mapk8ip2Q9ERE9 830 aa13.18□□□□□ -0.3
Trav16n-201ENSMUST00000103633 Phf23Q8BSN5 401 aa12.34□□□□□ -0.43
Trav16n-201ENSMUST00000103633 Plppr3Q7TPB0 716 aa12.08□□□□□ -0.48
Trav16n-201ENSMUST00000103633 Gab3Q8BSM5 595 aa11.89□□□□□ -0.51
Trav16n-201ENSMUST00000103633 Senp3Q9EP97 568 aaKnown RBP11.39□□□□□ -0.59
Trav16n-201ENSMUST00000103633 Kcna4Q61423 654 aa11.15□□□□□ -0.62
Trav16n-201ENSMUST00000103633 Trap1aP19473 224 aa10.12□□□□□ -0.79
Trav16n-201ENSMUST00000103633 Ppargc1bQ8VHJ7 1014 aa9.98□□□□□ -0.81
Trav16n-201ENSMUST00000103633 Dmrt2Q8BG36 561 aa9.96□□□□□ -0.82
Trav16n-201ENSMUST00000103633 Hoxd11P23813 323 aa9.94□□□□□ -0.82
Trav16n-201ENSMUST00000103633 Fam163aQ8CAA5 168 aa9.72□□□□□ -0.85
Trav16n-201ENSMUST00000103633 Slc4a1apE9PX68 744 aa9.66□□□□□ -0.86
Trav16n-201ENSMUST00000103633 Znf219Q6IQX8 726 aa9.56□□□□□ -0.88
Trav16n-201ENSMUST00000103633 Chrna2Q91X60 512 aa9.54□□□□□ -0.88
Trav16n-201ENSMUST00000103633 Rsph4aQ8BYM7 716 aa9.44□□□□□ -0.9
Trav16n-201ENSMUST00000103633 Atf5O70191 283 aa9.41□□□□□ -0.9
Trav16n-201ENSMUST00000103633 Ppp4r2Q0VGB7 417 aa9.35□□□□□ -0.91
Trav16n-201ENSMUST00000103633 Hs6st3Q9QYK4 470 aa9.3□□□□□ -0.92
Trav16n-201ENSMUST00000103633 Rimbp2Q80U40 1072 aa9.29□□□□□ -0.92
Trav16n-201ENSMUST00000103633 Dnajc5bQ9CQ94 199 aa9.27□□□□□ -0.93
Trav16n-201ENSMUST00000103633 1700123L14RikQ3V2K7 440 aa9.19□□□□□ -0.94
Trav16n-201ENSMUST00000103633 Ube2uB1AUC4 352 aa9.14□□□□□ -0.95
Trav16n-201ENSMUST00000103633 ArsiQ32KI9 573 aa9.05□□□□□ -0.96
Trav16n-201ENSMUST00000103633 Akt1s1Q9D1F4 257 aa9.01□□□□□ -0.97
Trav16n-201ENSMUST00000103633 Fam71e1A1L3C1 212 aa8.98□□□□□ -0.97
Trav16n-201ENSMUST00000103633 Bach1P97302 739 aa8.94□□□□□ -0.98
Trav16n-201ENSMUST00000103633 Slc34a2Q9DBP0 697 aa8.86□□□□□ -0.99
Trav16n-201ENSMUST00000103633 GapdhsQ64467 440 aa8.84□□□□□ -0.99
Trav16n-201ENSMUST00000103633 Nlrp6Q91WS2 869 aa8.83□□□□□ -1
Trav16n-201ENSMUST00000103633 Cdca7Q9D0M2 382 aa8.78□□□□□ -1
Trav16n-201ENSMUST00000103633 Sox12Q04890 314 aa8.76□□□□□ -1.01
Trav16n-201ENSMUST00000103633 AcrbpQ3V140 540 aa8.74□□□□□ -1.01
Trav16n-201ENSMUST00000103633 WdpcpQ8C456 722 aa8.73□□□□□ -1.01
Trav16n-201ENSMUST00000103633 Pde4cQ3UEI1 686 aa8.66□□□□□ -1.02
Trav16n-201ENSMUST00000103633 C1qtnf12Q8R2Z0 308 aa8.62□□□□□ -1.03
Trav16n-201ENSMUST00000103633 Prm3Q62100 101 aa8.55□□□□□ -1.04
Trav16n-201ENSMUST00000103633 Npm2Q80W85 207 aa8.54□□□□□ -1.04
Trav16n-201ENSMUST00000103633 Riok3Q9DBU3 519 aaKnown RBP8.54□□□□□ -1.04
Trav16n-201ENSMUST00000103633 Rtn4Q99P72 1162 aaKnown RBP8.52□□□□□ -1.05
Trav16n-201ENSMUST00000103633 MyclP10166 368 aa8.5□□□□□ -1.05
Trav16n-201ENSMUST00000103633 Tshz2Q68FE9 1030 aa8.46□□□□□ -1.06
Trav16n-201ENSMUST00000103633 Ehmt2Q9Z148 1263 aaKnown RBP8.46□□□□□ -1.06
Trav16n-201ENSMUST00000103633 G430095P16RikE9Q913 147 aa8.43□□□□□ -1.06
Trav16n-201ENSMUST00000103633 Ifnlr1Q8CGK5 535 aa8.43□□□□□ -1.06
Trav16n-201ENSMUST00000103633 Ms4a5Q810P8 197 aa8.42□□□□□ -1.06
Trav16n-201ENSMUST00000103633 Trim41Q5NCC3 630 aa8.39□□□□□ -1.07
Trav16n-201ENSMUST00000103633 Styxl1Q9DAR2 321 aa8.38□□□□□ -1.07
Trav16n-201ENSMUST00000103633 Egfem1Q8C088 590 aa8.32□□□□□ -1.08
Trav16n-201ENSMUST00000103633 Zbtb7aO88939 569 aaKnown RBP8.31□□□□□ -1.08
Trav16n-201ENSMUST00000103633 Grwd1Q810D6 446 aaKnown RBP8.29□□□□□ -1.08
Trav16n-201ENSMUST00000103633 Zbtb12Q9Z150 459 aa8.23□□□□□ -1.09
Trav16n-201ENSMUST00000103633 Abcb7Q61102 752 aaKnown RBP8.19□□□□□ -1.1
Trav16n-201ENSMUST00000103633 Rnf216P58283 853 aa8.14□□□□□ -1.11
Trav16n-201ENSMUST00000103633 Gtpbp6Q3U6U5 514 aa8.14□□□□□ -1.11
Trav16n-201ENSMUST00000103633 Ecm2Q5FW85 670 aa8.13□□□□□ -1.11
Trav16n-201ENSMUST00000103633 Znf704Q9ERQ3 566 aa8.12□□□□□ -1.11
Trav16n-201ENSMUST00000103633 Fbln2P37889 1221 aa8.1□□□□□ -1.11
Trav16n-201ENSMUST00000103633 MpndQ3TV65 487 aa8.09□□□□□ -1.11
Trav16n-201ENSMUST00000103633 Nkx1-1G3UXB3 402 aa8.07□□□□□ -1.12
Trav16n-201ENSMUST00000103633 Slc4a5E9Q3M5 1116 aa8.06□□□□□ -1.12
Trav16n-201ENSMUST00000103633 Tcf3P15806 651 aa8.04□□□□□ -1.12
Trav16n-201ENSMUST00000103633 Npm3Q9CPP0 175 aaKnown RBP8.04□□□□□ -1.12
Trav16n-201ENSMUST00000103633 Prdm10Q3UTQ7 1184 aa8.02□□□□□ -1.13
Trav16n-201ENSMUST00000103633 Skida1Q80YR3 822 aa7.96□□□□□ -1.14
Trav16n-201ENSMUST00000103633 Ppp1r37Q8BKR5 712 aa7.91□□□□□ -1.14
Trav16n-201ENSMUST00000103633 Lrrc43Q3V0L5 667 aa7.76□□□□□ -1.17
Trav16n-201ENSMUST00000103633 Jarid2Q62315 1234 aa7.74□□□□□ -1.17
Trav16n-201ENSMUST00000103633 Pitpnm1O35954 1243 aa7.67□□□□□ -1.18
Trav16n-201ENSMUST00000103633 CatipB9EKE5 520 aa7.66□□□□□ -1.18
Trav16n-201ENSMUST00000103633 MycnP03966 462 aaKnown RBP7.65□□□□□ -1.18
Trav16n-201ENSMUST00000103633 Trim35Q8C006 501 aa7.63□□□□□ -1.19
Trav16n-201ENSMUST00000103633 Kcnn1Q9EQR3 537 aa7.63□□□□□ -1.19
Trav16n-201ENSMUST00000103633 Spock2Q9ER58 423 aa7.63□□□□□ -1.19
Trav16n-201ENSMUST00000103633 Ppp6r1Q7TSI3 856 aa7.62□□□□□ -1.19
Trav16n-201ENSMUST00000103633 Gm35339A0A140LHH9 1649 aa7.62□□□□□ -1.19
Trav16n-201ENSMUST00000103633 Prr29B1ARI9 187 aa7.6□□□□□ -1.19
Trav16n-201ENSMUST00000103633 Hdac5Q9Z2V6 1113 aa7.59□□□□□ -1.19
Trav16n-201ENSMUST00000103633 Cadps2Q8BYR5 1297 aa7.58□□□□□ -1.2
Trav16n-201ENSMUST00000103633 Hnrnpul2Q00PI9 745 aaKnown RBP7.56□□□□□ -1.2
Trav16n-201ENSMUST00000103633 Sra1Q80VJ2 232 aa7.54□□□□□ -1.2
Trav16n-201ENSMUST00000103633 Pde4dQ01063 747 aa7.53□□□□□ -1.2
Trav16n-201ENSMUST00000103633 Nyap1Q6PFX7 833 aa7.53□□□□□ -1.2
Trav16n-201ENSMUST00000103633 Fam117bQ3U3E2 584 aa7.52□□□□□ -1.21
Trav16n-201ENSMUST00000103633 Kank3Q9Z1P7 791 aa7.52□□□□□ -1.21
Trav16n-201ENSMUST00000103633 Zbtb22Q9Z0G7 638 aa7.51□□□□□ -1.21
Trav16n-201ENSMUST00000103633 Znf703P0CL69 594 aa7.5□□□□□ -1.21
Trav16n-201ENSMUST00000103633 Repin1Q5U4E2 545 aa7.49□□□□□ -1.21
Trav16n-201ENSMUST00000103633 Ferd3lQ923Z4 168 aa7.49□□□□□ -1.21
Trav16n-201ENSMUST00000103633 Gm13697A2AK42 830 aa7.48□□□□□ -1.21
Trav16n-201ENSMUST00000103633 Pip4p2Q9CZX7 257 aa7.48□□□□□ -1.21
Trav16n-201ENSMUST00000103633 Skap1Q3UUV5 355 aa7.45□□□□□ -1.22
Trav16n-201ENSMUST00000103633 TimelessQ9R1X4 1197 aa7.44□□□□□ -1.22
Trav16n-201ENSMUST00000103633 Ildr2B5TVM2 661 aa7.43□□□□□ -1.22
Trav16n-201ENSMUST00000103633 Cacnb1Q8R3Z5 597 aa7.42□□□□□ -1.22
Trav16n-201ENSMUST00000103633 Clcn6O35454 870 aa7.41□□□□□ -1.22
Trav16n-201ENSMUST00000103633 Zbtb7bQ64321 544 aa7.41□□□□□ -1.22
Trav16n-201ENSMUST00000103633 SnphQ80U23 495 aa7.41□□□□□ -1.22
Trav16n-201ENSMUST00000103633 PygbQ8CI94 843 aaKnown RBP7.41□□□□□ -1.22
Trav16n-201ENSMUST00000103633 Prdm16A2A935 1275 aa7.39□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms